Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc41.10 Carica papaya HOM05D006908 ORTHO05D008662 8.8e-93 343.6 171 100.0
Cpa.g.sc1626.1 Carica papaya HOM05D006908 ORTHO05D008662 3.1e-29 132.5 68 98.5
Atru.chr1.3281 Acer truncatum HOM05D006908 ORTHO05D008662 2.5e-15 86.3 71 64.8
Gorai.006G098400 Gossypium raimondii HOM05D006908 ORTHO05D008662 1.3e-14 84.0 73 58.9
Gohir.D09G082700 Gossypium hirsutum HOM05D006908 ORTHO05D008662 4.8e-14 82.0 73 57.5
Sabra01G0145800 Salix brachista HOM05D006908 ORTHO05D008662 8.2e-14 81.3 65 56.9
Thecc.06G089400 Theobroma cacao HOM05D006908 ORTHO05D008662 2.4e-13 79.7 74 59.5
COL.COLO4_30388 Corchorus olitorius HOM05D006908 ORTHO05D008662 3.1e-13 79.3 65 61.5
Potri.001G181200 Populus trichocarpa HOM05D006908 ORTHO05D008662 4.1e-13 79.0 65 55.4
Gohir.A09G082800 Gossypium hirsutum HOM05D006908 ORTHO05D008662 4.5e-12 75.5 56 66.1
Duzib160G0703 Durio zibethinus HOM05D006908 ORTHO05D008662 7.6e-12 74.7 73 57.5
Actinidia01807 Actinidia chinensis HOM05D006908 ORTHO05D008662 3.8e-11 72.4 66 57.6
Dinv38042 Davidia involucrata HOM05D006908 ORTHO05D008662 1.1e-10 70.9 75 54.7
Prupe.3G070300 Prunus persica HOM05D006908 ORTHO05D008662 9.3e-10 67.8 72 52.8
Hma1.2p1_0323F.1_g125120 Hydrangea macrophylla HOM05D006908 ORTHO05D008662 1.2e-09 67.4 89 48.3
Hma1.2p1_0323F.1_g125130 Hydrangea macrophylla HOM05D006908 ORTHO05D008662 1.2e-09 67.4 89 48.3
Rhsim08G0222000 Rhododendron simsii HOM05D006908 ORTHO05D008662 1.2e-09 67.4 81 49.4
THA.LOC104812520 Tarenaya hassleriana HOM05D006908 ORTHO05D008662 1.2e-09 67.4 65 50.8
Cfa002075 Carpinus fangiana HOM05D006908 ORTHO05D008662 2.1e-09 66.6 75 46.7
TWI75G1463 Tripterygium wilfordii HOM05D006908 ORTHO05D008662 2.1e-09 66.6 53 60.4
SalBow2G2262 Salvia bowleyana HOM05D006908 ORTHO05D008662 2.7e-09 66.2 70 52.9
vmacro18903 Vaccinium macrocarpon HOM05D006908 ORTHO05D008662 4.6e-09 65.5 70 55.7
Haze_16403 Corylus avellana HOM05D006908 ORTHO05D008662 7.9e-09 64.7 75 45.3
Nn8g39204 Nelumbo nucifera HOM05D006908 ORTHO05D008662 7.9e-09 64.7 97 46.4
CiPaw.01G238600 Carya illinoinensis HOM05D006908 ORTHO05D008662 1.0e-08 64.3 72 43.1
Ciclev10025928m.g Citrus clementina HOM05D006908 ORTHO05D008662 1.0e-08 64.3 99 42.4
GSVIVG01017098001 Vitis vinifera HOM05D006908 ORTHO05D008662 1.0e-08 64.3 71 53.5
Medtr2g102040 Medicago truncatula HOM05D006908 ORTHO05D008662 1.3e-08 63.9 82 45.1
PGR102G2040 Punica granatum HOM05D006908 ORTHO05D008662 1.8e-08 63.5 82 43.9
TAR626G0624 Trochodendron aralioides HOM05D006908 ORTHO05D008662 3.9e-08 62.4 93 47.3
Lj5C59T9 Lonicera japonica HOM05D006908 ORTHO05D008662 5.1e-08 62.0 87 47.1
MSTRG.11073 Avicennia marina HOM05D006908 ORTHO05D008662 8.7e-08 61.2 69 50.7
MD17G1194300 Malus domestica HOM05D006908 ORTHO05D008662 1.1e-07 60.8 74 48.6
QL05p023344 Quercus lobata HOM05D006908 ORTHO05D008662 1.5e-07 60.5 69 50.7
Cc04_g03340 Coffea canephora HOM05D006908 ORTHO05D008662 1.9e-07 60.1 72 50.0
Solyc03g120130.4 Solanum lycopersicum HOM05D006908 ORTHO05D008662 1.9e-07 60.1 73 46.6
Sopen03g039000 Solanum pennellii HOM05D006908 ORTHO05D008662 1.9e-07 60.1 73 46.6
PGSC0003DMG400005687 Solanum tuberosum HOM05D006908 ORTHO05D008662 3.3e-07 59.3 73 46.6
FAN05G1986 Fragaria x ananassa HOM05D006908 ORTHO05D008662 4.3e-07 58.9 71 39.4
Lj3g0017668 Lotus japonicus HOM05D006908 ORTHO05D008662 4.3e-07 58.9 97 41.2
Manes.11G045900 Manihot esculenta HOM05D006908 ORTHO05D008662 4.3e-07 58.9 35 68.6
EL10Ac9g22006 Beta vulgaris HOM05D006908 ORTHO05D008662 5.7e-07 58.5 60 53.3
DCAR_023055 Daucus carota HOM05D006908 ORTHO05D008662 5.7e-07 58.5 70 48.6
Nitab4.5_0002308g0060 Nicotiana tabacum HOM05D006908 ORTHO05D008662 5.7e-07 58.5 92 44.6
SGA_v2.0_scaffold37G14828 Striga asiatica HOM05D006908 ORTHO05D008662 5.7e-07 58.5 77 45.5
Ca_01120_v3 Cicer arietinum L. HOM05D006908 ORTHO05D008662 2.2e-06 56.6 84 42.9
ECA247G1365 Erigeron canadensis HOM05D006908 ORTHO05D008662 2.8e-06 56.2 96 39.6
Migut.I00872 Erythranthe guttata HOM05D006908 ORTHO05D008662 2.8e-06 56.2 69 47.8
Oeu063957.2 Olea europaea HOM05D006908 ORTHO05D008662 2.8e-06 56.2 57 50.9
Nitab4.5_0000671g0150 Nicotiana tabacum HOM05D006908 ORTHO05D008662 4.8e-06 55.5 89 39.3
FAN09G3067 Fragaria x ananassa HOM05D006908 ORTHO05D008662 6.3e-06 55.1 71 36.6


User provided reference genes

Program Settings