Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc409.1 Carica papaya HOM05D006537 ORTHO05D008186 1.2e-96 356.7 207 100.0
TWI63G0033 Tripterygium wilfordii HOM05D006537 ORTHO05D008186 5.1e-87 324.7 202 82.7
Manes.04G042325 Manihot esculenta HOM05D006537 ORTHO05D008186 1.1e-86 323.6 205 82.0
QL10p048350 Quercus lobata HOM05D006537 ORTHO05D008186 3.3e-86 322.0 202 82.7
MD04G1039500 Malus domestica HOM05D006537 ORTHO05D008186 2.8e-85 318.9 202 81.7
Gohir.A02G015200 Gossypium hirsutum HOM05D006537 ORTHO05D008186 6.3e-85 317.8 202 80.7
Haze_01534 Corylus avellana HOM05D006537 ORTHO05D008186 1.1e-84 317.0 202 82.7
Thecc.04G185300 Theobroma cacao HOM05D006537 ORTHO05D008186 1.1e-84 317.0 202 81.7
Ciclev10021930m.g Citrus clementina HOM05D006537 ORTHO05D008186 1.8e-84 316.2 202 81.7
GSVIVG01010746001 Vitis vinifera HOM05D006537 ORTHO05D008186 2.4e-84 315.8 202 81.2
Dinv22722 Davidia involucrata HOM05D006537 ORTHO05D008186 3.1e-84 315.5 202 80.7
Potri.007G127400 Populus trichocarpa HOM05D006537 ORTHO05D008186 3.1e-84 315.5 202 81.2
TAR633G2589 Trochodendron aralioides HOM05D006537 ORTHO05D008186 3.1e-84 315.5 202 81.2
COL.COLO4_24411 Corchorus olitorius HOM05D006537 ORTHO05D008186 4.1e-84 315.1 202 80.7
Duzib268G1074 Durio zibethinus HOM05D006537 ORTHO05D008186 5.3e-84 314.7 202 80.2
Gohir.D02G016700 Gossypium hirsutum HOM05D006537 ORTHO05D008186 6.9e-84 314.3 202 79.7
CiPaw.01G101300 Carya illinoinensis HOM05D006537 ORTHO05D008186 9.1e-84 313.9 202 80.7
Duzib212G0958 Durio zibethinus HOM05D006537 ORTHO05D008186 9.1e-84 313.9 202 80.2
THA.LOC104826193 Tarenaya hassleriana HOM05D006537 ORTHO05D008186 1.2e-83 313.5 202 85.1
Prupe.1G190300 Prunus persica HOM05D006537 ORTHO05D008186 1.5e-83 313.2 202 79.7
CSS0005792 Camellia sinensis var. sinensis HOM05D006537 ORTHO05D008186 4.5e-83 311.6 202 79.2
Gorai.005G020200 Gossypium raimondii HOM05D006537 ORTHO05D008186 4.5e-83 311.6 202 79.2
RcHm_v2.0_Chr4g0407291 Rosa chinensis HOM05D006537 ORTHO05D008186 1.0e-82 310.5 202 86.6
AT2G31440 Arabidopsis thaliana HOM05D006537 ORTHO05D008186 2.2e-82 309.3 202 76.2
AL4G26710 Arabidopsis lyrata HOM05D006537 ORTHO05D008186 2.9e-82 308.9 202 76.2
Aa31LG5G5440 Aethionema arabicum HOM05D006537 ORTHO05D008186 5.0e-82 308.1 202 83.2
Sabra07G0103400 Salix brachista HOM05D006537 ORTHO05D008186 8.5e-82 307.4 212 76.4
Atru.chr3.1537 Acer truncatum HOM05D006537 ORTHO05D008186 1.4e-81 306.6 202 78.2
Lj3g0010197 Lotus japonicus HOM05D006537 ORTHO05D008186 1.4e-81 306.6 201 76.6
Nitab4.5_0003132g0110 Nicotiana tabacum HOM05D006537 ORTHO05D008186 1.4e-81 306.6 204 77.0
Carub.0004s1277 Capsella rubella HOM05D006537 ORTHO05D008186 2.5e-81 305.8 202 74.8
Psat7g214000 Pisum sativum HOM05D006537 ORTHO05D008186 2.5e-81 305.8 202 76.7
Sp4g13920 Schrenkiella parvula HOM05D006537 ORTHO05D008186 2.5e-81 305.8 202 74.8
Ca_20779_v3 Cicer arietinum L. HOM05D006537 ORTHO05D008186 3.2e-81 305.4 202 77.7
vmacro22675 Vaccinium macrocarpon HOM05D006537 ORTHO05D008186 3.2e-81 305.4 202 76.7
CANSAT78G1337 Cannabis sativa HOM05D006537 ORTHO05D008186 5.5e-81 304.7 202 78.2
Nitab4.5_0004579g0020 Nicotiana tabacum HOM05D006537 ORTHO05D008186 7.2e-81 304.3 202 76.2
PGSC0003DMG400027008 Solanum tuberosum HOM05D006537 ORTHO05D008186 7.2e-81 304.3 202 75.7
TPR.G34202 Trifolium pratense HOM05D006537 ORTHO05D008186 9.4e-81 303.9 202 77.2
Eucgr.A00271 Eucalyptus grandis HOM05D006537 ORTHO05D008186 1.2e-80 303.5 202 77.7
FvH4_4g11160 Fragaria vesca HOM05D006537 ORTHO05D008186 1.2e-80 303.5 202 77.2
Solyc06g073410.3 Solanum lycopersicum HOM05D006537 ORTHO05D008186 1.2e-80 303.5 202 75.2
Sopen06g029790 Solanum pennellii HOM05D006537 ORTHO05D008186 1.2e-80 303.5 202 75.2
ClCG08G004470 Citrullus lanatus HOM05D006537 ORTHO05D008186 2.1e-80 302.8 202 76.2
Eucgr.A00074 Eucalyptus grandis HOM05D006537 ORTHO05D008186 2.1e-80 302.8 202 77.2
Peaxi162Scf00375g00618 Petunia axillaris HOM05D006537 ORTHO05D008186 2.7e-80 302.4 202 74.8
Aqoxy2G04100 Aquilegia oxysepala HOM05D006537 ORTHO05D008186 3.6e-80 302.0 202 75.2
Thhalv10017140m.g Eutrema salsugineum HOM05D006537 ORTHO05D008186 6.1e-80 301.2 202 76.2
Glyma.11G128700 Glycine max HOM05D006537 ORTHO05D008186 6.1e-80 301.2 202 76.7
arahy.Tifrunner.gnm1.ann1.RQ8JR0 Arachis hypogaea HOM05D006537 ORTHO05D008186 7.9e-80 300.8 202 75.2
arahy.Tifrunner.gnm1.ann1.W0CVEC Arachis hypogaea HOM05D006537 ORTHO05D008186 7.9e-80 300.8 202 75.2
BcaC01g05952 Brassica carinata HOM05D006537 ORTHO05D008186 7.9e-80 300.8 202 74.3
C03p20710 Brassica napus HOM05D006537 ORTHO05D008186 7.9e-80 300.8 202 74.3
BolC3t14452H Brassica oleracea HOM05D006537 ORTHO05D008186 7.9e-80 300.8 202 74.3
Lalb_Chr01g0003221 Lupinus albus HOM05D006537 ORTHO05D008186 7.9e-80 300.8 202 76.2
A03p17600 Brassica napus HOM05D006537 ORTHO05D008186 1.0e-79 300.4 202 74.3
BraA03t11027Z Brassica rapa HOM05D006537 ORTHO05D008186 1.0e-79 300.4 202 74.3
Medtr4g067050 Medicago truncatula HOM05D006537 ORTHO05D008186 1.8e-79 299.7 202 74.3
MELO3C011641.2 Cucumis melo HOM05D006537 ORTHO05D008186 2.3e-79 299.3 202 75.2
CARHR125090 Cardamine hirsuta HOM05D006537 ORTHO05D008186 3.0e-79 298.9 202 73.8
Cc00_g09850 Coffea canephora HOM05D006537 ORTHO05D008186 3.9e-79 298.5 206 76.2
CsaV3_6G003840 Cucumis sativus L. HOM05D006537 ORTHO05D008186 3.9e-79 298.5 202 74.8
Glyma.12G053200 Glycine max HOM05D006537 ORTHO05D008186 3.9e-79 298.5 202 75.2
Actinidia35970 Actinidia chinensis HOM05D006537 ORTHO05D008186 8.8e-79 297.4 202 74.8
Phvul.011G055200 Phaseolus vulgaris HOM05D006537 ORTHO05D008186 8.8e-79 297.4 202 75.2
PSO675G9308 Papaver somniferum HOM05D006537 ORTHO05D008186 2.0e-78 296.2 200 76.0
BcaB01g04045 Brassica carinata HOM05D006537 ORTHO05D008186 2.6e-78 295.8 202 73.3
VMungo1127G2200 Vigna mungo HOM05D006537 ORTHO05D008186 4.4e-78 295.0 202 74.8
PSO732G0008 Papaver somniferum HOM05D006537 ORTHO05D008186 5.7e-78 294.7 200 75.0
AUR62015408 Chenopodium quinoa HOM05D006537 ORTHO05D008186 7.4e-78 294.3 202 72.8
Rhsim09G0028500 Rhododendron simsii HOM05D006537 ORTHO05D008186 9.7e-78 293.9 214 72.4
Oeu011639.1 Olea europaea HOM05D006537 ORTHO05D008186 2.8e-77 292.4 202 73.8
Sed0000584 Sechium edule HOM05D006537 ORTHO05D008186 3.7e-77 292.0 209 72.7
Actinidia34608 Actinidia chinensis HOM05D006537 ORTHO05D008186 6.3e-77 291.2 202 73.8
HanXRQChr14g0433111 Helianthus annuus HOM05D006537 ORTHO05D008186 8.2e-77 290.8 201 72.6
Dinv44198 Davidia involucrata HOM05D006537 ORTHO05D008186 1.1e-76 290.4 184 82.6
ECA238G3138 Erigeron canadensis HOM05D000961 ORTHO05D000001 9.1e-76 287.3 201 72.1
Lsat_1_v5_gn_2_34721 Lactuca sativa HOM05D006537 ORTHO05D008186 1.5e-75 286.6 201 74.6
CDE04G1858 Ceratophyllum demersum HOM05D006537 ORTHO05D008186 7.7e-75 284.3 202 70.8
SGA_v2.0_scaffold74G24571 Striga asiatica HOM05D006537 ORTHO05D008186 1.3e-74 283.5 202 69.8
unitig_747.g21541 Utricularia gibba HOM05D006537 ORTHO05D008186 2.9e-74 282.3 202 67.8
Migut.C00288 Erythranthe guttata HOM05D006537 ORTHO05D008186 8.5e-74 280.8 202 70.8
ATR0686G132 Amborella trichopoda HOM05D006537 ORTHO05D008186 2.5e-73 279.3 202 73.8
EL10Ac3g05587 Beta vulgaris HOM05D006537 ORTHO05D008186 4.2e-73 278.5 223 65.5
SEGI_14947 Sequoiadendron giganteum HOM05D006537 ORTHO05D008186 1.6e-72 276.6 202 70.3
CAN.G65.183 Capsicum annuum HOM05D006537 ORTHO05D008186 8.8e-71 270.8 202 72.8
Os02g0272600 Oryza sativa ssp. japonica HOM05D006537 ORTHO05D008186 8.8e-71 270.8 202 71.3
HPP92_005584 Vanilla planifolia HOM05D006537 ORTHO05D008186 2.6e-70 269.2 202 67.3
HPP92_005589 Vanilla planifolia HOM05D006537 ORTHO05D008186 3.3e-70 268.9 202 67.3
Nn1g09574 Nelumbo nucifera HOM05D006537 ORTHO05D008186 1.8e-68 263.1 202 68.8
Zm00001eb237480 Zea mays HOM05D006537 ORTHO05D008186 2.0e-67 259.6 200 64.5
Sc25g0002980 Simmondsia chinensis HOM05D006537 ORTHO05D008186 3.8e-66 255.4 202 73.3
AUR62002287 Chenopodium quinoa HOM05D006537 ORTHO05D008186 3.2e-57 225.7 138 74.6
Lj6A56G22 Lonicera japonica HOM05D006537 ORTHO05D008186 3.6e-56 222.2 202 60.9
Hund03149 Selenicereus undatus HOM05D006537 ORTHO05D008186 4.7e-56 221.9 215 60.9
A10p04320 Brassica napus HOM05D006537 ORTHO05D008186 8.0e-56 221.1 138 73.2
PGR083G1737 Punica granatum HOM05D006537 ORTHO05D008186 5.2e-55 218.4 202 61.4
MSTRG.24999 Avicennia marina HOM05D006537 ORTHO05D008186 8.8e-55 217.6 202 58.4
Mapoly0042s0024 Marchantia polymorpha HOM05D006537 ORTHO05D008186 9.8e-54 214.2 203 52.2
AagrBONN_evm.TU.Sc2ySwM_344.2170 Anthoceros agrestis HOM05D006537 ORTHO05D008186 2.8e-53 212.6 202 54.0
FAN07G2858 Fragaria x ananassa HOM05D006537 ORTHO05D008186 2.0e-51 206.5 202 58.9
PSO675G6606 Papaver somniferum HOM05D006537 ORTHO05D008186 1.6e-48 196.8 146 66.4
PSO229G0026 Papaver somniferum HOM05D006537 ORTHO05D008186 8.0e-48 194.5 142 66.9
PSO675G1145 Papaver somniferum HOM05D006537 ORTHO05D008186 8.0e-48 194.5 142 66.9
Pp3c14_4280 Physcomitrium patens HOM05D006537 ORTHO05D008186 1.0e-47 194.1 202 51.0
PSO832G3398 Papaver somniferum HOM05D006537 ORTHO05D008186 4.0e-47 192.2 117 80.3
SMO174G0097 Selaginella moellendorffii HOM05D006537 ORTHO05D008186 1.2e-46 190.7 200 51.5
PSO017G0422 Papaver somniferum HOM05D006537 ORTHO05D008186 5.7e-46 188.3 110 82.7
SalBow7G4202 Salvia bowleyana HOM05D006537 ORTHO05D008186 9.8e-46 187.6 133 66.2
Pp3c10_5780 Physcomitrium patens HOM05D006537 ORTHO05D008186 1.8e-44 183.3 200 46.5
BraA10t42709Z Brassica rapa HOM05D006537 ORTHO05D008186 3.8e-42 175.6 113 73.5
SHI21233 Sapria himalayana HOM05D006537 ORTHO05D008186 2.7e-35 152.9 112 67.0
BraA10t42699Z Brassica rapa HOM05D006537 ORTHO05D008186 6.2e-32 141.7 92 75.0
Lj6P622T45 Lonicera japonica HOM05D006537 ORTHO05D008186 2.9e-29 132.9 84 76.2
DCAR_022903 Daucus carota HOM05D006537 ORTHO05D008186 1.4e-28 130.6 119 58.8
Cre13.g576300 Chlamydomonas reinhardtii HOM05D006537 ORTHO05D008186 9.2e-20 101.3 190 36.3
vmacro00700 Vaccinium macrocarpon HOM05D006537 ORTHO05D008186 3.0e-18 96.3 126 51.6
CBR_g29804 Chara braunii HOM05D006537 ORTHO05D008186 1.5e-17 94.0 70 65.7
A10p04420 Brassica napus HOM05D006537 ORTHO05D008186 1.1e-12 77.8 50 74.0
Sopen06g005930 Solanum pennellii HOM05D006537 ORTHO05D008186 6.2e-08 62.0 38 86.8


User provided reference genes

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