Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc405.6 Carica papaya HOM05D000751 ORTHO05D000889 0.0e+00 1202.2 607 100.0
Cpa.g.c44565 Carica papaya HOM05D000751 ORTHO05D000889 1.5e-163 580.5 277 100.0
Dinv05472 Davidia involucrata HOM05D000751 ORTHO05D000889 1.7e-90 337.8 592 39.7
Potri.015G020400 Populus trichocarpa HOM05D000751 ORTHO05D000889 3.2e-89 333.6 594 39.1
TAR375G0110 Trochodendron aralioides HOM05D000751 ORTHO05D000889 8.0e-88 328.9 592 39.2
Potri.012G000900 Populus trichocarpa HOM05D000751 ORTHO05D000889 3.0e-87 327.0 590 39.7
CSS0000685 Camellia sinensis var. sinensis HOM05D000751 ORTHO05D000889 1.0e-79 302.0 586 36.7
Aqoxy7G00122 Aquilegia oxysepala HOM05D000751 ORTHO05D000889 1.4e-79 301.6 530 36.6
Sabra12G0020300 Salix brachista HOM05D000751 ORTHO05D000889 1.3e-77 295.0 589 37.5
TAR374G0274 Trochodendron aralioides HOM05D000751 ORTHO05D000889 2.2e-77 294.3 618 37.1
GSVIVG01028706001 Vitis vinifera HOM05D000751 ORTHO05D000889 2.8e-77 293.9 592 36.3
Cc02_g39220 Coffea canephora HOM05D000751 ORTHO05D000889 2.9e-74 283.9 635 33.9
Nn1g01852 Nelumbo nucifera HOM05D000751 ORTHO05D000889 3.8e-74 283.5 616 35.1
Cfa003812 Carpinus fangiana HOM05D000751 ORTHO05D000889 3.3e-73 280.4 599 35.7
CSS0016436 Camellia sinensis var. sinensis HOM05D000751 ORTHO05D000889 2.1e-72 277.7 600 35.8
Nn3g19032 Nelumbo nucifera HOM05D000751 ORTHO05D000889 6.1e-72 276.2 581 36.1
CSS0040691 Camellia sinensis var. sinensis HOM05D000751 ORTHO05D000889 1.8e-71 274.6 601 35.6
Dinv18736 Davidia involucrata HOM05D000751 ORTHO05D000889 2.3e-71 274.2 596 34.2
Haze_15642 Corylus avellana HOM05D000751 ORTHO05D000889 4.0e-71 273.5 599 34.7
Aqoxy5G04195 Aquilegia oxysepala HOM05D000751 ORTHO05D000889 5.2e-71 273.1 643 34.4
Dinv32574 Davidia involucrata HOM05D000751 ORTHO05D000889 2.0e-70 271.2 597 34.7
Hund27209 Selenicereus undatus HOM05D000751 ORTHO05D000889 4.1e-68 263.5 534 34.5
Actinidia28502 Actinidia chinensis HOM05D000751 ORTHO05D000889 5.4e-68 263.1 596 33.9
MBI16_g18209_MAGBIO Magnolia biondii HOM05D000751 ORTHO05D000889 7.0e-68 262.7 576 34.2
Rhsim03G0200200 Rhododendron simsii HOM05D000751 ORTHO05D000889 1.2e-67 261.9 621 35.1
Manes.05G024100 Manihot esculenta HOM05D000751 ORTHO05D000889 7.3e-65 252.7 599 33.2
Manes.01G247200 Manihot esculenta HOM05D000751 ORTHO05D000889 9.5e-65 252.3 603 32.5
Ciclev10023855m.g Citrus clementina HOM05D000751 ORTHO05D000889 1.2e-64 251.9 636 32.1
DCAR_010616 Daucus carota HOM05D000751 ORTHO05D000889 1.6e-64 251.5 590 34.7
TWI59G1107 Tripterygium wilfordii HOM05D000751 ORTHO05D000889 1.6e-64 251.5 549 33.7
VMungo0331G1997 Vigna mungo HOM05D000751 ORTHO05D000889 1.6e-64 251.5 589 33.6
AUR62004473 Chenopodium quinoa HOM05D000751 ORTHO05D000889 4.7e-64 250.0 560 34.6
Prupe.2G186200 Prunus persica HOM05D000751 ORTHO05D000889 6.8e-63 246.1 592 33.1
arahy.Tifrunner.gnm1.ann1.2FK0GQ Arachis hypogaea HOM05D000751 ORTHO05D000889 2.9e-61 240.7 585 34.0
ClCG09G009590 Citrullus lanatus HOM05D000751 ORTHO05D000889 4.9e-61 240.0 585 33.2
Glyma.07G056700 Glycine max HOM05D000751 ORTHO05D000889 4.9e-61 240.0 587 32.5
TPR.G31614 Trifolium pratense HOM05D000751 ORTHO05D000889 4.9e-61 240.0 569 32.7
ATR0626G291 Amborella trichopoda HOM05D000751 ORTHO05D000889 1.1e-60 238.8 580 33.1
AUR62023477 Chenopodium quinoa HOM05D000751 ORTHO05D000889 1.4e-60 238.4 555 34.1
Phvul.010G112700 Phaseolus vulgaris HOM05D000751 ORTHO05D000889 1.4e-60 238.4 553 33.3
RcHm_v2.0_Chr1g0359271 Rosa chinensis HOM05D000751 ORTHO05D000889 1.4e-60 238.4 592 33.1
Potri.014G097600 Populus trichocarpa HOM05D000751 ORTHO05D000889 3.2e-60 237.3 568 32.7
Actinidia10121 Actinidia chinensis HOM05D000751 ORTHO05D000889 5.4e-60 236.5 598 32.8
Ca_26355_v3 Cicer arietinum L. HOM05D000751 ORTHO05D000889 1.6e-59 235.0 584 31.8
Ca_30811_v3 Cicer arietinum L. HOM05D000751 ORTHO05D000889 1.6e-59 235.0 584 31.8
Atru.chr5.651 Acer truncatum HOM05D000751 ORTHO05D000889 2.7e-59 234.2 544 33.3
Glyma.16G025800 Glycine max HOM05D000751 ORTHO05D000889 4.6e-59 233.4 574 32.9
Peaxi162Scf00786g00440 Petunia axillaris HOM05D000751 ORTHO05D000889 6.0e-59 233.0 601 32.6
arahy.Tifrunner.gnm1.ann1.8G1IGY Arachis hypogaea HOM05D000751 ORTHO05D000889 1.7e-58 231.5 584 33.6
Lj3g0026226 Lotus japonicus HOM05D000751 ORTHO05D000889 1.7e-58 231.5 567 31.0
Gorai.008G124600 Gossypium raimondii HOM05D000751 ORTHO05D000889 3.9e-58 230.3 533 33.8
MD07G1148100 Malus domestica HOM05D000751 ORTHO05D000889 3.9e-58 230.3 595 31.9
Psat4g214480 Pisum sativum HOM05D000751 ORTHO05D000889 3.9e-58 230.3 568 30.5
Gohir.D12G115000 Gossypium hirsutum HOM05D000751 ORTHO05D000889 1.1e-57 228.8 533 33.4
Sabra02G0142700 Salix brachista HOM05D000751 ORTHO05D000889 1.1e-57 228.8 604 33.6
Sopen10g005300 Solanum pennellii HOM05D000751 ORTHO05D000889 1.1e-57 228.8 524 33.2
MELO3C023722.2 Cucumis melo HOM05D000751 ORTHO05D000889 1.5e-57 228.4 589 33.4
Rhsim01G0171600 Rhododendron simsii HOM05D000751 ORTHO05D000889 1.5e-57 228.4 591 33.8
vmacro13151 Vaccinium macrocarpon HOM05D000751 ORTHO05D000889 2.5e-57 227.6 607 31.6
Duzib138G1949 Durio zibethinus HOM05D000751 ORTHO05D000889 3.3e-57 227.3 599 32.1
CsaV3_7G025210 Cucumis sativus L. HOM05D000751 ORTHO05D000889 7.3e-57 226.1 589 33.3
Potri.002G169732 Populus trichocarpa HOM05D000751 ORTHO05D000889 7.3e-57 226.1 540 33.0
MD01G1079200 Malus domestica HOM05D000751 ORTHO05D000889 2.1e-56 224.6 593 32.0
Solyc01g095730.4 Solanum lycopersicum HOM05D000751 ORTHO05D000889 2.1e-56 224.6 537 35.2
Sopen01g039480 Solanum pennellii HOM05D000751 ORTHO05D000889 2.1e-56 224.6 537 35.0
Ah.05g179730 Amaranthus hybridus HOM05D000751 ORTHO05D000889 2.8e-56 224.2 595 31.1
Gohir.A12G111700 Gossypium hirsutum HOM05D000751 ORTHO05D000889 8.1e-56 222.6 597 31.2
CAN.G986.20 Capsicum annuum HOM05D000751 ORTHO05D000889 1.1e-55 222.2 591 32.8
Lj9A596T52 Lonicera japonica HOM05D000751 ORTHO05D000889 1.8e-55 221.5 576 31.1
Solyc10g009490.2 Solanum lycopersicum HOM05D000751 ORTHO05D000889 1.8e-55 221.5 524 32.8
Nitab4.5_0008279g0040 Nicotiana tabacum HOM05D000751 ORTHO05D000889 5.2e-55 219.9 531 35.0
Medtr8g027790 Medicago truncatula HOM05D000751 ORTHO05D000889 1.2e-54 218.8 590 30.7
QL04p056643 Quercus lobata HOM05D000751 ORTHO05D000889 1.5e-54 218.4 589 30.9
Thecc.01G344300 Theobroma cacao HOM05D000751 ORTHO05D000889 1.5e-54 218.4 587 31.5
EL10Ac1g00291 Beta vulgaris HOM05D000751 ORTHO05D000889 2.0e-54 218.0 553 32.2
Gohir.A07G138300 Gossypium hirsutum HOM05D000751 ORTHO05D000889 2.0e-54 218.0 527 34.3
PGR031G2844 Punica granatum HOM05D000751 ORTHO05D000889 2.0e-54 218.0 552 36.1
VMungo0540G1551 Vigna mungo HOM05D000751 ORTHO05D000889 2.0e-54 218.0 574 31.2
Lalb_Chr17g0342511 Lupinus albus HOM05D000751 ORTHO05D000889 7.5e-54 216.1 567 29.6
Peaxi162Scf00218g00063 Petunia axillaris HOM05D000751 ORTHO05D000889 7.5e-54 216.1 532 32.3
Lalb_Chr04g0254471 Lupinus albus HOM05D000751 ORTHO05D000889 9.8e-54 215.7 571 29.8
Sed0027487 Sechium edule HOM05D000751 ORTHO05D000889 9.8e-54 215.7 610 30.0
Nitab4.5_0001715g0020 Nicotiana tabacum HOM05D000751 ORTHO05D000889 2.2e-53 214.5 526 33.1
FAN10G1631 Fragaria x ananassa HOM05D000751 ORTHO05D000889 2.9e-53 214.2 588 31.1
FAN10G3268 Fragaria x ananassa HOM05D000751 ORTHO05D000889 2.9e-53 214.2 588 31.1
FAN06G1708 Fragaria x ananassa HOM05D000751 ORTHO05D000889 3.7e-53 213.8 590 32.2
FvH4_7g16250 Fragaria vesca HOM05D000751 ORTHO05D000889 8.3e-53 212.6 591 32.1
Rhsim07G0005100 Rhododendron simsii HOM05D000751 ORTHO05D000889 1.1e-52 212.2 601 31.8
Phvul.006G112100 Phaseolus vulgaris HOM05D000751 ORTHO05D000889 4.1e-52 210.3 556 30.6
Sc23g0002150 Simmondsia chinensis HOM05D000751 ORTHO05D000889 4.1e-52 210.3 529 31.0
Cpa.g.c37005 Carica papaya HOM05D000751 ORTHO05D000889 1.2e-51 208.8 523 32.5
Oeu026814.1 Olea europaea HOM05D000751 ORTHO05D000889 1.6e-51 208.4 530 30.9
FAN01G0360 Fragaria x ananassa HOM05D000751 ORTHO05D000889 2.1e-51 208.0 589 31.1
Gorai.001G155400 Gossypium raimondii HOM05D000751 ORTHO05D000889 2.1e-51 208.0 590 32.4
Lj3C908T15 Lonicera japonica HOM05D000751 ORTHO05D000889 2.1e-51 208.0 526 33.5
vmacro06560 Vaccinium macrocarpon HOM05D000751 ORTHO05D000889 2.1e-51 208.0 577 32.2
CAN.G72.20 Capsicum annuum HOM05D000751 ORTHO05D000889 2.7e-51 207.6 556 30.4
CANSAT56G1511 Cannabis sativa HOM05D000751 ORTHO05D000889 1.0e-50 205.7 595 31.4
FAN06G2986 Fragaria x ananassa HOM05D000751 ORTHO05D000889 1.0e-50 205.7 591 31.8
PSO063G2570 Papaver somniferum HOM05D000751 ORTHO05D000889 1.7e-50 204.9 546 32.4
HPP92_020417 Vanilla planifolia HOM05D000751 ORTHO05D000889 3.0e-50 204.1 571 30.5
Nitab4.5_0000838g0100 Nicotiana tabacum HOM05D000751 ORTHO05D000889 3.9e-50 203.8 608 32.7
Sed0006751 Sechium edule HOM05D000751 ORTHO05D000889 5.1e-50 203.4 578 31.3
PSO170G4436 Papaver somniferum HOM05D000751 ORTHO05D000889 6.6e-50 203.0 545 32.5
Gohir.D07G143400 Gossypium hirsutum HOM05D000751 ORTHO05D000889 1.5e-49 201.8 526 33.3
FAN03G1458 Fragaria x ananassa HOM05D000751 ORTHO05D000889 2.5e-49 201.1 589 30.7
Ciclev10018622m.g Citrus clementina HOM05D000751 ORTHO05D000889 3.3e-49 200.7 534 30.9
Gohir.A08G033900 Gossypium hirsutum HOM05D000751 ORTHO05D000889 1.6e-48 198.4 539 32.3
CiPaw.02G039900 Carya illinoinensis HOM05D000751 ORTHO05D000889 2.8e-48 197.6 601 30.0
Lalb_Chr18g0044381 Lupinus albus HOM05D000751 ORTHO05D000889 1.1e-47 195.7 568 31.5
vmacro12683 Vaccinium macrocarpon HOM05D000751 ORTHO05D000889 3.1e-47 194.1 597 29.6
Gorai.004G043500 Gossypium raimondii HOM05D000751 ORTHO05D000889 4.0e-47 193.7 599 32.1
Gohir.D08G044500 Gossypium hirsutum HOM05D000751 ORTHO05D000889 5.2e-47 193.4 535 32.3
Sabra14G0071400 Salix brachista HOM05D000751 ORTHO05D000889 6.8e-47 193.0 533 32.3
DCAR_008660 Daucus carota HOM05D000751 ORTHO05D000889 1.2e-46 192.2 523 29.3
Aa31LG10G15690 Aethionema arabicum HOM05D000751 ORTHO05D000889 3.4e-46 190.7 536 31.0
Oeu019764.1 Olea europaea HOM05D000751 ORTHO05D000889 5.8e-46 189.9 596 28.2
Hma1.2p1_0295F.1_g116580 Hydrangea macrophylla HOM05D000751 ORTHO05D000889 7.6e-46 189.5 571 29.2
Migut.B01854 Erythranthe guttata HOM05D000751 ORTHO05D000889 1.3e-45 188.7 595 30.6
Lj2g0009144 Lotus japonicus HOM05D000751 ORTHO05D000889 2.9e-45 187.6 541 30.5
THA.LOC104817345 Tarenaya hassleriana HOM05D000751 ORTHO05D000889 4.9e-45 186.8 587 29.0
MSTRG.20898 Avicennia marina HOM05D000751 ORTHO05D000889 8.4e-45 186.0 545 31.6
DCAR_006969 Daucus carota HOM05D000751 ORTHO05D000889 8.4e-45 186.0 559 29.3
Nitab4.5_0001829g0050 Nicotiana tabacum HOM05D000751 ORTHO05D000889 5.4e-44 183.3 546 29.9
SalBow5G0471 Salvia bowleyana HOM05D000751 ORTHO05D000889 5.4e-44 183.3 536 31.5
MSTRG.4812 Avicennia marina HOM05D000751 ORTHO05D000889 1.6e-43 181.8 522 30.3
BraA07t30207Z Brassica rapa HOM05D000751 ORTHO05D000889 3.5e-43 180.6 615 28.8
AT3G61690 Arabidopsis thaliana HOM05D000751 ORTHO05D000889 4.6e-43 180.3 609 29.6
Carub.0005s2844 Capsella rubella HOM05D000751 ORTHO05D000889 7.8e-43 179.5 617 30.0
Lalb_Chr10g0100431 Lupinus albus HOM05D000751 ORTHO05D000889 7.8e-43 179.5 534 29.6
AL5G44190 Arabidopsis lyrata HOM05D000751 ORTHO05D000889 1.0e-42 179.1 609 29.7
Gorai.007G107700 Gossypium raimondii HOM05D000751 ORTHO05D000889 1.0e-42 179.1 576 31.2
THA.LOC104802065 Tarenaya hassleriana HOM05D000751 ORTHO05D000889 1.7e-42 178.3 549 29.3
Gohir.D11G101200 Gossypium hirsutum HOM05D000751 ORTHO05D000889 6.6e-42 176.4 576 30.9
PSO384G4917 Papaver somniferum HOM05D000751 ORTHO05D000889 1.9e-41 174.9 297 40.1
Sc26g0000690 Simmondsia chinensis HOM05D000751 ORTHO05D000889 2.5e-41 174.5 563 29.8
PSO135G0332 Papaver somniferum HOM05D000751 ORTHO05D000889 3.3e-41 174.1 297 39.7
Sp5g01700 Schrenkiella parvula HOM05D000751 ORTHO05D000889 9.6e-41 172.6 571 28.5
CiPaw.02G039700 Carya illinoinensis HOM05D000751 ORTHO05D000889 2.8e-40 171.0 652 27.5
CARHR172000 Cardamine hirsuta HOM05D000751 ORTHO05D000889 8.1e-40 169.5 611 28.8
Migut.N01553 Erythranthe guttata HOM05D000751 ORTHO05D000889 1.1e-39 169.1 534 29.8
ECA236G1997 Erigeron canadensis HOM05D000751 ORTHO05D000889 5.2e-39 166.8 608 29.1
ECA236G0082 Erigeron canadensis HOM05D000751 ORTHO05D000889 2.0e-38 164.9 577 29.8
HanXRQChr04g0120291 Helianthus annuus HOM05D000751 ORTHO05D000889 9.9e-38 162.5 586 28.8
BcaC08g45150 Brassica carinata HOM05D000751 ORTHO05D000889 1.3e-37 162.2 609 27.8
Thhalv10005749m.g Eutrema salsugineum HOM05D000751 ORTHO05D000889 1.7e-37 161.8 638 27.3
GSVIVG01027083001 Vitis vinifera HOM05D000751 ORTHO05D000889 2.2e-37 161.4 594 28.5
Eucgr.D02366 Eucalyptus grandis HOM05D000751 ORTHO05D000889 4.9e-37 160.2 534 28.3
SHI13284 Sapria himalayana HOM05D000751 ORTHO05D000889 6.4e-37 159.8 573 28.1
HanXRQChr06g0170661 Helianthus annuus HOM05D000751 ORTHO05D000889 8.4e-37 159.5 524 30.9
SGA_v2.0_scaffold11G05730 Striga asiatica HOM05D000751 ORTHO05D000889 4.2e-36 157.1 571 28.9
Gohir.A11G096500 Gossypium hirsutum HOM05D000751 ORTHO05D000889 1.3e-34 152.1 555 29.0
C06p27680 Brassica napus HOM05D000751 ORTHO05D000889 1.7e-34 151.8 607 28.7
BolC6t37939H Brassica oleracea HOM05D000751 ORTHO05D000889 2.3e-34 151.4 607 28.7
unitig_22.g6817 Utricularia gibba HOM05D000751 ORTHO05D000889 1.1e-33 149.1 488 27.7
A09p53780 Brassica napus HOM05D000751 ORTHO05D000889 1.3e-32 145.6 574 27.5
BraA09t40797Z Brassica rapa HOM05D000751 ORTHO05D000889 1.3e-32 145.6 572 26.9
C08p36590 Brassica napus HOM05D000751 ORTHO05D000889 6.2e-32 143.3 573 26.5
BolC8t51242H Brassica oleracea HOM05D000751 ORTHO05D000889 6.2e-32 143.3 573 26.5
A07p25670 Brassica napus HOM05D000751 ORTHO05D000889 8.1e-32 142.9 610 27.2
CDE07G0665 Ceratophyllum demersum HOM05D000751 ORTHO05D000889 2.4e-31 141.4 560 26.4
CDE04G0189 Ceratophyllum demersum HOM05D000751 ORTHO05D000889 7.6e-30 136.3 581 25.5
Hund11684 Selenicereus undatus HOM05D000751 ORTHO05D000889 9.9e-30 136.0 303 33.7
Os03g0210800 Oryza sativa ssp. japonica HOM05D000751 ORTHO05D000889 1.7e-29 135.2 625 25.6
Zm00001eb007050 Zea mays HOM05D000751 ORTHO05D000889 4.6e-27 127.1 613 23.7
AUR62006140 Chenopodium quinoa HOM05D000751 ORTHO05D000889 6.0e-27 126.7 251 35.5
TAR629G3273 Trochodendron aralioides HOM05D000751 ORTHO05D038485 1.0e-26 125.9 310 32.9
EL10Ac3g05337 Beta vulgaris HOM05D000751 ORTHO05D000889 1.3e-26 125.6 599 26.2
CSS0024343 Camellia sinensis var. sinensis HOM05D000751 ORTHO05D000889 3.3e-25 120.9 171 43.9
Zm00001eb400460 Zea mays HOM05D000751 ORTHO05D000889 4.3e-25 120.6 618 24.8
Lsat_1_v5_gn_4_33260 Lactuca sativa HOM05D000751 ORTHO05D000889 9.6e-25 119.4 554 27.1
Lsat_1_v5_gn_4_33301 Lactuca sativa HOM05D000751 ORTHO05D000889 9.6e-25 119.4 554 27.1
HanXRQChr17g0562871 Helianthus annuus HOM05D000751 ORTHO05D000889 1.6e-24 118.6 567 27.2
Lj1g0025738 Lotus japonicus HOM05D000751 ORTHO05D000889 2.4e-23 114.8 453 28.3
AUR62019349 Chenopodium quinoa HOM05D000751 ORTHO05D000889 4.0e-23 114.0 229 34.9
SEGI_18049 Sequoiadendron giganteum HOM05D000751 ORTHO05D000889 7.6e-22 109.8 228 33.8
SGA_v2.0_scaffold43G16370 Striga asiatica HOM05D000751 ORTHO05D000889 2.2e-21 108.2 196 39.3
Aqoxy5G01824 Aquilegia oxysepala HOM05D000751 ORTHO05D038485 3.8e-21 107.5 150 44.7
Oeu004943.2 Olea europaea HOM05D000751 ORTHO05D000889 2.5e-17 94.7 532 25.8
Ah.07g205960 Amaranthus hybridus HOM05D000751 ORTHO05D000889 5.3e-15 87.0 226 32.7
Actinidia28127 Actinidia chinensis HOM05D000751 ORTHO05D000889 2.9e-13 81.3 640 25.0
vmacro13150 Vaccinium macrocarpon HOM05D000751 ORTHO05D000889 5.1e-10 70.5 108 40.7
Cpa.g.sc273.3 Carica papaya HOM05D000751 ORTHO05D000889 2.5e-09 68.2 158 32.9
Ca_16677_v3 Cicer arietinum L. HOM05D000751 ORTHO05D000889 2.5e-09 68.2 227 28.2
Phvul.009G054300 Phaseolus vulgaris HOM05D000751 ORTHO05D000889 1.5e-06 58.9 194 30.4
VMungo1309G0290 Vigna mungo HOM05D000751 ORTHO05D000889 1.0e-05 56.2 188 31.4


User provided reference genes

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