Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc40.63 Carica papaya HOM05D004485 ORTHO05D005485 2.9e-202 708.8 471 100.0
Atru.chr7.1446 Acer truncatum HOM05D004485 ORTHO05D005485 3.6e-88 329.7 440 51.4
Dinv36695 Davidia involucrata HOM05D004485 ORTHO05D005485 1.1e-87 328.2 437 49.4
Thecc.09G101900 Theobroma cacao HOM05D004485 ORTHO05D005485 1.1e-87 328.2 440 52.3
Haze_25812 Corylus avellana HOM05D004485 ORTHO05D005485 1.4e-87 327.8 452 50.2
Duzib187G1416 Durio zibethinus HOM05D004485 ORTHO05D005485 1.2e-86 324.7 440 50.2
QL02p042072 Quercus lobata HOM05D004485 ORTHO05D005485 1.7e-85 320.9 440 49.3
GSVIVG01015314001 Vitis vinifera HOM05D004485 ORTHO05D005485 1.1e-84 318.2 444 48.9
CiPaw.04G158800 Carya illinoinensis HOM05D004485 ORTHO05D005485 9.2e-84 315.1 446 49.1
Ciclev10007632m.g Citrus clementina HOM05D004485 ORTHO05D005485 4.6e-83 312.8 441 50.1
TWI34G0799 Tripterygium wilfordii HOM05D004485 ORTHO05D005485 1.0e-82 311.6 440 49.8
CiPaw.03G226100 Carya illinoinensis HOM05D004485 ORTHO05D005485 3.0e-82 310.1 441 48.8
CSS0002032 Camellia sinensis var. sinensis HOM05D004485 ORTHO05D005485 4.3e-81 306.2 441 48.8
CSS0009570 Camellia sinensis var. sinensis HOM05D004485 ORTHO05D005485 4.3e-81 306.2 441 48.8
vmacro10859 Vaccinium macrocarpon HOM05D004485 ORTHO05D005485 2.1e-80 303.9 439 48.7
Gohir.A08G242800 Gossypium hirsutum HOM05D004485 ORTHO05D005485 4.7e-80 302.8 448 49.1
Gohir.D08G263700 Gossypium hirsutum HOM05D004485 ORTHO05D005485 1.4e-79 301.2 448 46.4
TAR624G1325 Trochodendron aralioides HOM05D004485 ORTHO05D005485 2.4e-79 300.4 440 48.4
Gorai.010G076200 Gossypium raimondii HOM05D004485 ORTHO05D005485 1.5e-78 297.7 440 56.4
Gohir.D06G065100 Gossypium hirsutum HOM05D004485 ORTHO05D005485 9.9e-78 295.0 440 45.9
MD02G1064300 Malus domestica HOM05D004485 ORTHO05D005485 9.9e-78 295.0 449 48.1
Gohir.A06G066600 Gossypium hirsutum HOM05D004485 ORTHO05D005485 1.1e-76 291.6 440 45.7
Actinidia09445 Actinidia chinensis HOM05D004485 ORTHO05D005485 1.9e-76 290.8 446 46.0
Nn8g39096 Nelumbo nucifera HOM05D004485 ORTHO05D005485 3.2e-76 290.0 440 47.5
Potri.018G086600 Populus trichocarpa HOM05D004485 ORTHO05D005485 3.5e-75 286.6 440 45.7
MD15G1195100 Malus domestica HOM05D004485 ORTHO05D005485 8.1e-72 275.4 447 47.2
Duzib168G0844 Durio zibethinus HOM05D004485 ORTHO05D005485 1.4e-71 274.6 440 44.3
Prupe.7G221400 Prunus persica HOM05D004485 ORTHO05D005485 1.2e-70 271.6 483 43.9
Glyma.16G077500 Glycine max HOM05D004485 ORTHO05D005485 1.7e-69 267.7 442 45.0
Sabra18G0074900 Salix brachista HOM05D004485 ORTHO05D005485 1.7e-69 267.7 440 44.8
Actinidia17528 Actinidia chinensis HOM05D004485 ORTHO05D005485 2.2e-69 267.3 446 43.3
CANSAT56G2449 Cannabis sativa HOM05D004485 ORTHO05D005485 3.8e-69 266.5 446 44.4
Glyma.01G008900 Glycine max HOM05D004485 ORTHO05D005485 8.4e-69 265.4 444 44.6
Oeu053166.1 Olea europaea HOM05D004485 ORTHO05D005485 1.4e-68 264.6 440 52.3
Ca_25562_v3 Cicer arietinum L. HOM05D004485 ORTHO05D005485 1.2e-67 261.5 445 59.8
MELO3C004583.2 Cucumis melo HOM05D004485 ORTHO05D005485 3.3e-65 253.4 446 43.9
CsaV3_2G001970 Cucumis sativus L. HOM05D004485 ORTHO05D005485 3.3e-65 253.4 446 43.9
Psat1g046640 Pisum sativum HOM05D004485 ORTHO05D005485 3.3e-65 253.4 446 50.4
MBI01_g35400_MAGBIO Magnolia biondii HOM05D004485 ORTHO05D005485 1.4e-63 248.1 443 44.9
ClCG11G002190 Citrullus lanatus HOM05D004485 ORTHO05D005485 3.1e-63 246.9 445 42.9
Sed0011847 Sechium edule HOM05D004485 ORTHO05D005485 6.9e-63 245.7 469 41.6
MSTRG.26380 Avicennia marina HOM05D004485 ORTHO05D005485 2.6e-62 243.8 441 43.1
Lalb_Chr14g0371821 Lupinus albus HOM05D004485 ORTHO05D005485 2.6e-62 243.8 445 43.6
RcHm_v2.0_Chr2g0091661 Rosa chinensis HOM05D004485 ORTHO05D005485 7.6e-62 242.3 457 57.1
Cc06_g10330 Coffea canephora HOM05D004485 ORTHO05D005485 1.7e-61 241.1 440 42.3
Actinidia39786 Actinidia chinensis HOM05D004485 ORTHO05D005485 2.2e-61 240.7 424 42.7
Nitab4.5_0000566g0170 Nicotiana tabacum HOM05D004485 ORTHO05D005485 2.9e-61 240.4 466 40.6
Hund29368 Selenicereus undatus HOM05D004485 ORTHO05D005485 6.4e-61 239.2 450 43.6
COL.COLO4_34764 Corchorus olitorius HOM05D004485 ORTHO05D005485 1.1e-60 238.4 441 42.2
CAN.G1642.10 Capsicum annuum HOM05D004485 ORTHO05D005485 1.4e-60 238.0 457 40.7
Eucgr.C01004 Eucalyptus grandis HOM05D004485 ORTHO05D005485 3.2e-60 236.9 440 41.1
THA.LOC104820040 Tarenaya hassleriana HOM05D004485 ORTHO05D005485 3.2e-60 236.9 446 57.6
TPR.G21387 Trifolium pratense HOM05D004485 ORTHO05D005485 3.2e-60 236.9 445 57.3
Gorai.004G281700 Gossypium raimondii HOM05D004485 ORTHO05D005485 4.2e-60 236.5 342 47.1
Sopen12g003350 Solanum pennellii HOM05D004485 ORTHO05D005485 4.2e-60 236.5 457 40.5
PGR102G0995 Punica granatum HOM05D004485 ORTHO05D005485 5.5e-60 236.1 462 47.2
Hund29369 Selenicereus undatus HOM05D004485 ORTHO05D005485 5.5e-60 236.1 450 43.3
Hma1.2p1_0571F.1_g180870 Hydrangea macrophylla HOM05D004485 ORTHO05D005485 9.3e-60 235.3 458 40.2
Phvul.004G170300 Phaseolus vulgaris HOM05D004485 ORTHO05D005485 9.3e-60 235.3 443 50.8
Medtr6g088595 Medicago truncatula HOM05D004485 ORTHO05D005485 2.7e-59 233.8 445 56.2
Solyc12g008390.3 Solanum lycopersicum HOM05D004485 ORTHO05D005485 2.7e-59 233.8 457 40.0
Lj2g0014691 Lotus japonicus HOM05D004485 ORTHO05D005485 4.6e-59 233.0 444 52.3
MBI07_g22518_MAGBIO Magnolia biondii HOM05D004485 ORTHO05D005485 7.9e-59 232.3 449 43.7
Carub.0003s3420 Capsella rubella HOM05D004485 ORTHO05D005485 1.0e-58 231.9 460 46.3
AL3G48250 Arabidopsis lyrata HOM05D004485 ORTHO05D005485 1.3e-58 231.5 458 42.1
AT2G19950 Arabidopsis thaliana HOM05D004485 ORTHO05D005485 1.8e-58 231.1 462 42.6
Manes.16G110100 Manihot esculenta HOM05D004485 ORTHO05D005485 3.9e-58 229.9 342 47.4
arahy.Tifrunner.gnm1.ann1.8771PM Arachis hypogaea HOM05D004485 ORTHO05D005485 8.7e-58 228.8 447 47.2
arahy.Tifrunner.gnm1.ann1.N3ID59 Arachis hypogaea HOM05D004485 ORTHO05D005485 1.1e-57 228.4 447 46.5
FAN26G0748 Fragaria x ananassa HOM05D004485 ORTHO05D005485 1.9e-57 227.6 458 56.1
FAN26G2333 Fragaria x ananassa HOM05D004485 ORTHO05D005485 2.5e-57 227.3 458 56.1
Sp3g33270 Schrenkiella parvula HOM05D004485 ORTHO05D005485 5.7e-57 226.1 460 54.6
Thhalv10001922m.g Eutrema salsugineum HOM05D004485 ORTHO05D005485 9.6e-57 225.3 460 41.5
EL10Ac8g18398 Beta vulgaris HOM05D004485 ORTHO05D005485 6.2e-56 222.6 444 40.8
Lalb_Chr24g0397331 Lupinus albus HOM05D004485 ORTHO05D005485 6.2e-56 222.6 446 46.6
BcaNung04089 Brassica carinata HOM05D004485 ORTHO05D005485 8.2e-56 222.2 468 42.9
FAN19G2910 Fragaria x ananassa HOM05D004485 ORTHO05D005485 4.0e-55 219.9 458 43.9
FAN28G2435 Fragaria x ananassa HOM05D004485 ORTHO05D005485 4.0e-55 219.9 458 55.5
FvH4_1g05970 Fragaria vesca HOM05D004485 ORTHO05D005485 5.3e-55 219.5 458 55.2
A09p12650 Brassica napus HOM05D004485 ORTHO05D005485 1.5e-54 218.0 462 41.3
Nitab4.5_0013389g0010 Nicotiana tabacum HOM05D004485 ORTHO05D005485 2.6e-54 217.2 481 38.0
Migut.K00530 Erythranthe guttata HOM05D004485 ORTHO05D005485 4.5e-54 216.5 441 39.2
VMungo0464G1472 Vigna mungo HOM05D004485 ORTHO05D005485 3.8e-53 213.4 444 50.2
BcaC04g22803 Brassica carinata HOM05D004485 ORTHO05D005485 8.4e-53 212.2 460 40.4
C09p15010 Brassica napus HOM05D004485 ORTHO05D005485 1.1e-52 211.8 460 40.4
PSO210G3171 Papaver somniferum HOM05D004485 ORTHO05D005485 1.1e-52 211.8 444 43.2
BolC9t54403H Brassica oleracea HOM05D004485 ORTHO05D005485 1.4e-52 211.5 460 40.2
BraA09t36912Z Brassica rapa HOM05D004485 ORTHO05D005485 2.5e-52 210.7 462 40.5
PSO210G4150 Papaver somniferum HOM05D004485 ORTHO05D005485 2.5e-52 210.7 444 39.9
Sc08g0007920 Simmondsia chinensis HOM05D004485 ORTHO05D005485 9.3e-52 208.8 442 39.1
Rhsim05G0040900 Rhododendron simsii HOM05D004485 ORTHO05D005485 1.2e-51 208.4 440 38.4
Aa31LG8G16840 Aethionema arabicum HOM05D004485 ORTHO05D005485 1.0e-50 205.3 479 43.8
CARHR110390 Cardamine hirsuta HOM05D004485 ORTHO05D005485 3.9e-50 203.4 464 44.4
Oeu064194.1 Olea europaea HOM05D004485 ORTHO05D005485 5.3e-47 193.0 421 40.1
Os01g0744400 Oryza sativa ssp. japonica HOM05D004485 ORTHO05D005485 3.4e-46 190.3 452 37.2
DCAR_012046 Daucus carota HOM05D004485 ORTHO05D005485 1.0e-45 188.7 307 43.0
AUR62021427 Chenopodium quinoa HOM05D004485 ORTHO05D005485 1.4e-44 184.9 472 35.8
HanXRQChr12g0358161 Helianthus annuus HOM05D004485 ORTHO05D005485 3.2e-44 183.7 493 47.7
FAN23G2550 Fragaria x ananassa HOM05D004485 ORTHO05D005485 4.2e-44 183.3 458 52.4
Zm00001eb153530 Zea mays HOM05D004485 ORTHO05D005485 7.2e-44 182.6 445 37.5
AUR62010900 Chenopodium quinoa HOM05D004485 ORTHO05D005485 1.4e-42 178.3 482 37.6
ATR0705G155 Amborella trichopoda HOM05D004485 ORTHO05D005485 6.7e-42 176.0 472 36.2
arahy.Tifrunner.gnm1.ann1.TC5UZA Arachis hypogaea HOM05D004485 ORTHO05D005485 3.7e-40 170.2 462 34.6
Zm00001eb371090 Zea mays HOM05D004485 ORTHO05D005485 6.3e-40 169.5 436 36.5
unitig_899.g15433 Utricularia gibba HOM05D004485 ORTHO05D005485 4.1e-39 166.8 445 40.2
arahy.Tifrunner.gnm1.ann1.96JC9B Arachis hypogaea HOM05D004485 ORTHO05D005485 1.5e-38 164.9 461 34.1
CDE04G3494 Ceratophyllum demersum HOM05D004485 ORTHO05D005485 2.6e-38 164.1 436 36.7
Aqoxy7G03881 Aquilegia oxysepala HOM05D004485 ORTHO05D005485 7.7e-38 162.5 448 40.6
ECA236G0540 Erigeron canadensis HOM05D004485 ORTHO05D005485 5.0e-37 159.8 465 37.4
SEGI_40884 Sequoiadendron giganteum HOM05D004485 ORTHO05D005485 1.2e-35 155.2 463 34.1
Peaxi162Scf00665g00331 Petunia axillaris HOM05D004485 ORTHO05D005485 2.7e-35 154.1 519 31.2
HPP92_005563 Vanilla planifolia HOM05D004485 ORTHO05D005485 6.1e-35 152.9 213 48.8
SHI02696 Sapria himalayana HOM05D004485 ORTHO05D005485 7.0e-31 139.4 409 35.2
Lsat_1_v5_gn_8_96840 Lactuca sativa HOM05D004485 ORTHO05D005485 7.7e-30 136.0 461 33.4
SGA_v2.0_scaffold129G34191 Striga asiatica HOM05D004485 ORTHO05D005485 1.0e-26 125.6 162 51.9
SMO140G0037 Selaginella moellendorffii HOM05D004485 ORTHO05D005485 1.3e-24 118.6 256 45.3
CBR_g39203 Chara braunii HOM05D004485 ORTHO05D005485 1.4e-18 98.6 193 35.8
arahy.Tifrunner.gnm1.ann1.SL9UG3 Arachis hypogaea HOM05D004485 ORTHO05D005485 6.3e-16 89.7 267 33.3
AagrBONN_evm.TU.Sc2ySwM_368.430 Anthoceros agrestis HOM05D004485 ORTHO05D005485 3.1e-15 87.4 459 27.5
SMO356G0242 Selaginella moellendorffii HOM05D004485 ORTHO05D005485 6.5e-13 79.7 256 29.7
Ah.14g083300 Amaranthus hybridus HOM05D004485 ORTHO05D005485 1.9e-12 78.2 167 38.9
CDE02G0772 Ceratophyllum demersum HOM05D004485 ORTHO05D005485 1.6e-11 75.1 52 80.8
Sc08g0007940 Simmondsia chinensis HOM05D004485 ORTHO05D005485 4.7e-11 73.6 50 84.0
Rhsim05G0040800 Rhododendron simsii HOM05D000602 ORTHO05D001147 6.8e-10 69.7 232 43.5
Ah.14g083310 Amaranthus hybridus HOM05D004485 ORTHO05D005485 4.5e-06 57.0 231 29.4
A07p00710 Brassica napus HOM05D004485 ORTHO05D005485 5.9e-06 56.6 64 60.9


User provided reference genes

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