Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc40.100 Carica papaya HOM05D002451 ORTHO05D007901 1.7e-69 265.8 127 100.0
Atru.chr7.1460 Acer truncatum HOM05D002451 ORTHO05D007901 1.5e-44 183.0 94 89.4
Peaxi162Scf00665g00035 Petunia axillaris HOM05D002451 ORTHO05D007901 9.6e-44 180.3 94 90.4
Gorai.009G027400 Gossypium raimondii HOM05D002451 ORTHO05D007901 6.2e-43 177.6 94 86.2
Duzib168G1562 Durio zibethinus HOM05D002451 ORTHO05D007901 2.4e-42 175.6 94 86.2
COL.COLO4_34751 Corchorus olitorius HOM05D002451 ORTHO05D007901 4.0e-42 174.9 94 85.1
Ciclev10008594m.g Citrus clementina HOM05D002451 ORTHO05D007901 9.0e-42 173.7 94 85.1
Nitab4.5_0000566g0090 Nicotiana tabacum HOM05D002451 ORTHO05D007901 1.2e-41 173.3 94 85.1
Lj7A665T28 Lonicera japonica HOM05D002451 ORTHO05D007901 3.4e-41 171.8 92 88.0
QL02p041683 Quercus lobata HOM05D002451 ORTHO05D007901 4.5e-41 171.4 98 84.7
ClCG11G002150 Citrullus lanatus HOM05D002451 ORTHO05D007901 7.6e-41 170.6 94 84.0
MELO3C004587.2 Cucumis melo HOM05D002451 ORTHO05D007901 7.6e-41 170.6 94 84.0
Nitab4.5_0005668g0020 Nicotiana tabacum HOM05D002451 ORTHO05D007901 7.6e-41 170.6 94 84.0
Sed0018496 Sechium edule HOM05D002451 ORTHO05D007901 7.6e-41 170.6 95 85.3
Sopen12g003400 Solanum pennellii HOM05D002451 ORTHO05D007901 9.9e-41 170.2 94 84.0
CAN.G1241.33 Capsicum annuum HOM05D002451 ORTHO05D007901 1.3e-40 169.9 88 88.6
Potri.018G087300 Populus trichocarpa HOM05D002451 ORTHO05D007901 1.3e-40 169.9 91 85.7
Dinv36690 Davidia involucrata HOM05D002451 ORTHO05D007901 2.2e-40 169.1 92 83.7
vmacro06250 Vaccinium macrocarpon HOM05D002451 ORTHO05D007901 2.2e-40 169.1 92 83.7
PGSC0003DMG400000298 Solanum tuberosum HOM05D002451 ORTHO05D007901 2.9e-40 168.7 94 83.0
Hund09106 Selenicereus undatus HOM05D002451 ORTHO05D007901 3.8e-40 168.3 92 84.8
CANSAT56G2212 Cannabis sativa HOM05D002451 ORTHO05D007901 6.4e-40 167.5 92 83.7
CsaV3_2G001930 Cucumis sativus L. HOM05D002451 ORTHO05D007901 6.4e-40 167.5 94 81.9
arahy.Tifrunner.gnm1.ann1.GUCG30 Arachis hypogaea HOM05D002451 ORTHO05D007901 8.4e-40 167.2 93 84.9
CiPaw.03G225500 Carya illinoinensis HOM05D002451 ORTHO05D007901 8.4e-40 167.2 90 86.7
TWI34G1500 Tripterygium wilfordii HOM05D002451 ORTHO05D007901 8.4e-40 167.2 93 84.9
Lalb_Chr05g0223211 Lupinus albus HOM05D002451 ORTHO05D007901 1.1e-39 166.8 93 86.0
Rhsim03G0237000 Rhododendron simsii HOM05D002451 ORTHO05D007901 1.1e-39 166.8 92 83.7
Hma1.2p1_0571F.1_g180680 Hydrangea macrophylla HOM05D002451 ORTHO05D007901 1.4e-39 166.4 89 85.4
Solyc12g008450.2 Solanum lycopersicum HOM05D002451 ORTHO05D007901 1.4e-39 166.4 94 83.0
TAR636G2911 Trochodendron aralioides HOM05D002451 ORTHO05D005601 1.4e-39 166.4 92 83.7
CSS0003026 Camellia sinensis var. sinensis HOM05D002451 ORTHO05D007901 1.9e-39 166.0 94 80.9
Cc06_g10440 Coffea canephora HOM05D002451 ORTHO05D007901 2.4e-39 165.6 89 86.5
Lj4g0024953 Lotus japonicus HOM05D002451 ORTHO05D007901 3.2e-39 165.2 89 87.6
Medtr8g102540 Medicago truncatula HOM05D002451 ORTHO05D007901 4.2e-39 164.9 93 83.9
Psat7g017040 Pisum sativum HOM05D002451 ORTHO05D007901 4.2e-39 164.9 90 85.6
EL10Ac8g18383 Beta vulgaris HOM05D002451 ORTHO05D007901 5.4e-39 164.5 91 83.5
Sc08g0008000 Simmondsia chinensis HOM05D002451 ORTHO05D007901 5.4e-39 164.5 94 78.7
PGR142G3373 Punica granatum HOM05D002451 ORTHO05D007901 7.1e-39 164.1 89 85.4
Actinidia32654 Actinidia chinensis HOM05D002451 ORTHO05D007901 9.3e-39 163.7 91 81.3
Glyma.05G227000 Glycine max HOM05D002451 ORTHO05D007901 1.2e-38 163.3 95 85.3
VMungo0251G0535 Vigna mungo HOM05D002451 ORTHO05D007901 1.2e-38 163.3 93 83.9
TPR.G23434 Trifolium pratense HOM05D002451 ORTHO05D007901 1.6e-38 162.9 90 83.3
Ah.14g083250 Amaranthus hybridus HOM05D002451 ORTHO05D007901 2.7e-38 162.2 87 85.1
MD02G1065300 Malus domestica HOM05D002451 ORTHO05D007901 2.7e-38 162.2 99 79.8
MSTRG.10604 Avicennia marina HOM05D002451 ORTHO05D007901 3.5e-38 161.8 92 81.5
FAN19G3003 Fragaria x ananassa HOM05D002451 ORTHO05D007901 4.6e-38 161.4 97 78.4
FAN26G0432 Fragaria x ananassa HOM05D002451 ORTHO05D007901 4.6e-38 161.4 97 78.4
FAN26G3439 Fragaria x ananassa HOM05D002451 ORTHO05D007901 4.6e-38 161.4 97 78.4
RcHm_v2.0_Chr2g0091831 Rosa chinensis HOM05D002451 ORTHO05D007901 4.6e-38 161.4 94 79.8
FAN23G2627 Fragaria x ananassa HOM05D002451 ORTHO05D007901 7.9e-38 160.6 97 77.3
Lsat_1_v5_gn_7_39761 Lactuca sativa HOM05D002451 ORTHO05D007901 1.0e-37 160.2 93 78.5
MBI04_g20306_MAGBIO Magnolia biondii HOM05D002451 ORTHO05D007901 1.8e-37 159.5 94 78.7
PSO063G0860 Papaver somniferum HOM05D002451 ORTHO05D007901 1.8e-37 159.5 92 77.2
Migut.K00538 Erythranthe guttata HOM05D002451 ORTHO05D007901 2.3e-37 159.1 91 84.6
GSVIVG01015305001 Vitis vinifera HOM05D002451 ORTHO05D007901 2.3e-37 159.1 91 82.4
Aa31LG3G1530 Aethionema arabicum HOM05D002451 ORTHO05D007901 3.0e-37 158.7 93 79.6
Aqoxy7G01412 Aquilegia oxysepala HOM05D002451 ORTHO05D007901 3.0e-37 158.7 91 79.1
CARHR135670 Cardamine hirsuta HOM05D002451 ORTHO05D007901 3.0e-37 158.7 87 85.1
AL4G38420 Arabidopsis lyrata HOM05D002451 ORTHO05D007901 3.9e-37 158.3 90 83.3
SGA_v2.0_scaffold19G08729 Striga asiatica HOM05D002451 ORTHO05D007901 6.7e-37 157.5 92 80.4
Oeu053181.2 Olea europaea HOM05D002451 ORTHO05D007901 8.7e-37 157.1 89 82.0
Sp4g22900 Schrenkiella parvula HOM05D002451 ORTHO05D007901 8.7e-37 157.1 90 82.2
SpUn0061_0010 Schrenkiella parvula HOM05D002451 ORTHO05D007901 8.7e-37 157.1 90 82.2
AT2G40570 Arabidopsis thaliana HOM05D002451 ORTHO05D007901 1.1e-36 156.8 90 82.2
DCAR_012039 Daucus carota HOM05D002451 ORTHO05D007901 1.1e-36 156.8 94 77.7
Thhalv10016464m.g Eutrema salsugineum HOM05D002451 ORTHO05D007901 1.1e-36 156.8 92 80.4
FAN28G1338 Fragaria x ananassa HOM05D002451 ORTHO05D007901 2.5e-36 155.6 97 76.3
unitig_46.g18400 Utricularia gibba HOM05D002451 ORTHO05D007901 2.5e-36 155.6 91 81.3
HPP92_009804 Vanilla planifolia HOM05D002451 ORTHO05D007901 4.3e-36 154.8 93 76.3
BcaB06g29152 Brassica carinata HOM05D002451 ORTHO05D007901 9.6e-36 153.7 90 78.9
BcaC02g07322 Brassica carinata HOM05D002451 ORTHO05D007901 9.6e-36 153.7 90 78.9
C04p68410 Brassica napus HOM05D002451 ORTHO05D007901 9.6e-36 153.7 90 78.9
BolC4t28342H Brassica oleracea HOM05D002451 ORTHO05D007901 9.6e-36 153.7 90 78.9
SalBow1G3696 Salvia bowleyana HOM05D002451 ORTHO05D007901 1.3e-35 153.3 87 81.6
SalBow1G8658 Salvia bowleyana HOM05D002451 ORTHO05D007901 1.3e-35 153.3 87 81.6
SGA_v2.0_scaffold19G08736 Striga asiatica HOM05D002451 ORTHO05D007901 2.1e-35 152.5 92 77.2
HanXRQChr09g0238871 Helianthus annuus HOM05D002451 ORTHO05D007901 2.8e-35 152.1 95 74.7
ATR0705G045 Amborella trichopoda HOM05D002451 ORTHO05D007901 3.7e-35 151.8 93 72.0
A04p31020 Brassica napus HOM05D002451 ORTHO05D007901 6.2e-35 151.0 90 77.8
BraA04t18559Z Brassica rapa HOM05D002451 ORTHO05D007901 6.2e-35 151.0 90 77.8
THA.LOC104807537 Tarenaya hassleriana HOM05D002451 ORTHO05D007901 1.4e-34 149.8 93 74.2
AUR62010914 Chenopodium quinoa HOM05D002451 ORTHO05D007901 1.8e-34 149.4 94 77.7
SEGI_00986 Sequoiadendron giganteum HOM05D002451 ORTHO05D007901 3.1e-34 148.7 92 71.7
SHI02693 Sapria himalayana HOM05D002451 ORTHO05D007901 2.6e-33 145.6 93 72.0
Eucgr.C00999 Eucalyptus grandis HOM05D002451 ORTHO05D007901 5.8e-33 144.4 91 81.3
Pp3c1_19270 Physcomitrium patens HOM05D002451 ORTHO05D007901 9.9e-33 143.7 87 73.6
AagrBONN_evm.TU.Sc2ySwM_117.4166 Anthoceros agrestis HOM05D002451 ORTHO05D007901 7.1e-31 137.5 92 70.7
SMO118G0195 Selaginella moellendorffii HOM05D002451 ORTHO05D007901 9.3e-31 137.1 87 73.6
Mapoly0002s0306 Marchantia polymorpha HOM05D002451 ORTHO05D007901 2.7e-30 135.6 87 67.8
Zm00001eb384640 Zea mays HOM05D002451 ORTHO05D007901 4.6e-30 134.8 90 70.0
CBR_g41536 Chara braunii HOM05D002451 ORTHO05D007901 1.8e-29 132.9 89 66.3
Os06g0555500 Oryza sativa ssp. japonica HOM05D002451 ORTHO05D007901 3.9e-29 131.7 90 70.0
MD15G1196200 Malus domestica HOM05D002451 ORTHO05D007901 2.5e-28 129.0 91 69.2
Sabra18G0075400 Salix brachista HOM05D002451 ORTHO05D007901 5.6e-28 127.9 71 81.7
Cre06.g272100 Chlamydomonas reinhardtii HOM05D002451 ORTHO05D007901 2.9e-24 115.5 87 59.8
Ca_17363_v3 Cicer arietinum L. HOM05D002451 ORTHO05D007901 1.9e-20 102.8 53 86.8
MCO03G573 Micromonas commoda HOM05D002451 ORTHO05D007901 4.1e-18 95.1 114 42.1
PRCOL_00006066 Prasinoderma coloniale HOM05D000173 ORTHO05D004400 9.7e-12 73.9 81 46.9


User provided reference genes

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