Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc4.196 Carica papaya HOM05D013899 ORTHO05D010953 1.3e-182 642.9 308 100.0
Cpa.g.sc93.6 Carica papaya HOM05D013899 ORTHO05D119125 5.2e-35 152.5 89 80.9
Cpa.g.sc189.15 Carica papaya HOM05D013899 ORTHO05D016902 2.1e-28 130.6 200 40.5
Cpa.g.sc0.199 Carica papaya HOM05D010740 ORTHO05D000022 9.2e-24 115.2 105 56.2
Cpa.g.sc0.187 Carica papaya HOM05D010740 ORTHO05D010953 7.8e-23 112.1 96 59.4
Cpa.g.sc28.90 Carica papaya HOM05D013899 ORTHO05D010953 9.8e-18 95.1 235 32.8
Cpa.g.c38141 Carica papaya HOM05D010740 ORTHO05D010953 7.0e-16 89.0 77 58.4
Atru.chr3.2099 Acer truncatum HOM05D000003 ORTHO05D000022 1.6e-12 77.8 122 36.9
TWI81G0242 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 2.8e-12 77.0 108 45.4
Prupe.1G446500 Prunus persica HOM05D000003 ORTHO05D000022 3.6e-12 76.6 186 28.5
Atru.chr3.2393 Acer truncatum HOM05D000003 ORTHO05D000022 6.2e-12 75.9 122 35.2
Atru.chr4.136 Acer truncatum HOM05D000003 ORTHO05D000022 8.1e-12 75.5 108 40.7
Atru.chr4.1844 Acer truncatum HOM05D000003 ORTHO05D000022 8.1e-12 75.5 109 41.3
Atru.chr6.2848 Acer truncatum HOM05D000003 ORTHO05D000022 1.8e-11 74.3 134 35.1
Atru.chr6.1170 Acer truncatum HOM05D000003 ORTHO05D000022 5.2e-11 72.8 108 40.7
Atru.chr1.1302 Acer truncatum HOM05D000003 ORTHO05D000004 8.9e-11 72.0 134 33.6
Atru.chr1.2428 Acer truncatum HOM05D000003 ORTHO05D000004 1.2e-10 71.6 102 43.1
PGR119G2417 Punica granatum HOM05D000003 ORTHO05D000004 1.5e-10 71.2 106 36.8
Atru.chr1.956 Acer truncatum HOM05D000003 ORTHO05D000006 3.4e-10 70.1 119 37.0
Atru.chr4.29 Acer truncatum HOM05D000003 ORTHO05D000022 3.4e-10 70.1 108 38.0
Prupe.6G118100 Prunus persica HOM05D000003 ORTHO05D000022 3.4e-10 70.1 120 35.8
PGR031G0166 Punica granatum HOM05D000155 ORTHO05D000022 4.4e-10 69.7 120 34.2
Atru.chr13.1101 Acer truncatum HOM05D000003 ORTHO05D000022 5.8e-10 69.3 102 42.2
Atru.chr3.867 Acer truncatum HOM05D000003 ORTHO05D000022 5.8e-10 69.3 119 37.8
FvH4_3g33091 Fragaria vesca HOM05D000003 ORTHO05D000022 5.8e-10 69.3 119 34.5
Prupe.5G085900 Prunus persica HOM05D000003 ORTHO05D000022 5.8e-10 69.3 120 35.8
Prupe.6G201000 Prunus persica HOM05D000003 ORTHO05D000022 5.8e-10 69.3 106 37.7
Atru.chr8.1057 Acer truncatum HOM05D000003 ORTHO05D000022 7.5e-10 68.9 86 43.0
Atru.chr10.713 Acer truncatum HOM05D000003 ORTHO05D000022 9.9e-10 68.6 119 36.1
Atru.chr12.2455 Acer truncatum HOM05D000003 ORTHO05D000022 9.9e-10 68.6 108 34.3
Atru.chr5.1030 Acer truncatum HOM05D000003 ORTHO05D000022 9.9e-10 68.6 119 36.1
COL.COLO4_06865 Corchorus olitorius HOM05D007909 ORTHO05D000743 9.9e-10 68.6 123 35.0
Atru.chr1.1484 Acer truncatum HOM05D000003 ORTHO05D000022 1.3e-09 68.2 106 38.7
Atru.chr11.82 Acer truncatum HOM05D000003 ORTHO05D000022 1.3e-09 68.2 97 38.1
Atru.chr7.120 Acer truncatum HOM05D000003 ORTHO05D000004 1.3e-09 68.2 114 39.5
Prupe.4G161900 Prunus persica HOM05D000003 ORTHO05D000022 1.7e-09 67.8 120 35.0
Atru.chr1.2620 Acer truncatum HOM05D000003 ORTHO05D000004 2.2e-09 67.4 108 35.2
Atru.chr5.1023 Acer truncatum HOM05D000003 ORTHO05D000022 2.2e-09 67.4 119 36.1
TWI38G0333 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 2.2e-09 67.4 105 39.0
Atru.chr12.663 Acer truncatum HOM05D000003 ORTHO05D000022 2.9e-09 67.0 120 32.5
Cpa.g.sc30.84 Carica papaya HOM05D013899 ORTHO05D000022 4.9e-09 66.2 74 43.2
Cpa.g.sc152.9 Carica papaya HOM05D013899 ORTHO05D017373 6.4e-09 65.9 59 49.2
SGA_v2.0_scaffold245G44469 Striga asiatica HOM05D000003 ORTHO05D000022 6.4e-09 65.9 103 37.9
Atru.chr11.90 Acer truncatum HOM05D000003 ORTHO05D000022 8.3e-09 65.5 102 38.2
Cpa.g.sc161.21 Carica papaya HOM05D011316 ORTHO05D010953 1.1e-08 65.1 72 50.0
Glyma.13G224100 Glycine max HOM05D000062 ORTHO05D000043 1.1e-08 65.1 148 33.8
VMungo0540G1625 Vigna mungo HOM05D000062 ORTHO05D000043 1.1e-08 65.1 148 32.4
Atru.chr11.1190 Acer truncatum HOM05D000003 ORTHO05D000022 1.4e-08 64.7 105 35.2
Atru.chr3.3019 Acer truncatum HOM05D000003 ORTHO05D000022 1.4e-08 64.7 108 33.3
Atru.chr2.284 Acer truncatum HOM05D000003 ORTHO05D000022 1.9e-08 64.3 105 34.3
Cpa.g.sc51.27 Carica papaya HOM05D016823 ORTHO05D043531 1.9e-08 64.3 60 51.7
Atru.chr8.699 Acer truncatum HOM05D000003 ORTHO05D000022 3.2e-08 63.5 108 32.4
Atru.chr7.668 Acer truncatum HOM05D000003 ORTHO05D000004 4.1e-08 63.2 135 34.1
Atru.chr8.2517 Acer truncatum HOM05D000003 ORTHO05D000022 4.1e-08 63.2 105 35.2
Cpa.g.sc280.8 Carica papaya HOM05D011316 ORTHO05D010953 4.1e-08 63.2 58 50.0
Lalb_Chr09g0330401 Lupinus albus HOM05D000155 ORTHO05D000022 4.1e-08 63.2 103 32.0
Atru.chr6.1037 Acer truncatum HOM05D000003 ORTHO05D000022 5.4e-08 62.8 108 33.3
Lalb_Chr07g0182561 Lupinus albus HOM05D000155 ORTHO05D000022 5.4e-08 62.8 104 33.7
Atru.chr2.2394 Acer truncatum HOM05D000003 ORTHO05D000022 7.1e-08 62.4 107 34.6
CSS0016748 Camellia sinensis var. sinensis HOM05D000155 ORTHO05D000022 7.1e-08 62.4 169 30.2
FvH4_2g15861 Fragaria vesca HOM05D000003 ORTHO05D000022 7.1e-08 62.4 119 32.8
RcHm_v2.0_Chr7g0181271 Rosa chinensis HOM05D000003 ORTHO05D000022 7.1e-08 62.4 119 31.1
Atru.chr4.172 Acer truncatum HOM05D000003 ORTHO05D000004 9.2e-08 62.0 102 38.2
Atru.chr6.1397 Acer truncatum HOM05D000003 ORTHO05D000022 9.2e-08 62.0 121 34.7
Phvul.006G170300 Phaseolus vulgaris HOM05D000062 ORTHO05D000043 9.2e-08 62.0 148 32.4
Atru.chr1.1867 Acer truncatum HOM05D000003 ORTHO05D000022 1.2e-07 61.6 102 34.3
CARHR220690 Cardamine hirsuta HOM05D000003 ORTHO05D000022 1.2e-07 61.6 149 36.2
LjContig00357g0004525 Lotus japonicus HOM05D000003 ORTHO05D000022 1.2e-07 61.6 108 33.3
Atru.chr10.557 Acer truncatum HOM05D000003 ORTHO05D000022 1.6e-07 61.2 108 35.2
Atru.chr12.2484 Acer truncatum HOM05D000003 ORTHO05D000022 1.6e-07 61.2 93 35.5
Atru.chr10.629 Acer truncatum HOM05D000003 ORTHO05D000004 2.1e-07 60.8 120 33.3
Atru.chr3.2588 Acer truncatum HOM05D000003 ORTHO05D000022 2.1e-07 60.8 102 33.3
COL.COLO4_27635 Corchorus olitorius HOM05D000003 ORTHO05D000022 2.1e-07 60.8 103 37.9
Manes.07G103102 Manihot esculenta HOM05D000003 ORTHO05D000004 2.1e-07 60.8 108 30.6
Atru.chr1.3262 Acer truncatum HOM05D000003 ORTHO05D000022 2.7e-07 60.5 93 38.7
Atru.chr11.1308 Acer truncatum HOM05D000003 ORTHO05D000022 2.7e-07 60.5 116 34.5
Atru.chr3.2067 Acer truncatum HOM05D000003 ORTHO05D000022 2.7e-07 60.5 108 35.2
Atru.chr7.259 Acer truncatum HOM05D000003 ORTHO05D000022 2.7e-07 60.5 108 33.3
SHI38779 Sapria himalayana HOM05D000155 ORTHO05D000022 2.7e-07 60.5 106 36.8
Atru.chr10.1106 Acer truncatum HOM05D000003 ORTHO05D000022 3.5e-07 60.1 108 31.5
Atru.chr10.890 Acer truncatum HOM05D000003 ORTHO05D000022 3.5e-07 60.1 115 33.9
Atru.chr12.385 Acer truncatum HOM05D000003 ORTHO05D000022 3.5e-07 60.1 108 35.2
Atru.chr3.2200 Acer truncatum HOM05D000003 ORTHO05D000022 3.5e-07 60.1 108 32.4
Atru.chr1.1905 Acer truncatum HOM05D000003 ORTHO05D000022 4.6e-07 59.7 110 34.5
Atru.chr10.1248 Acer truncatum HOM05D000003 ORTHO05D000022 4.6e-07 59.7 108 30.6
Cpa.g.sc11.14 Carica papaya HOM05D010740 ORTHO05D010953 4.6e-07 59.7 193 27.5
Atru.chr13.1498 Acer truncatum HOM05D000003 ORTHO05D000022 6.0e-07 59.3 98 34.7
Atru.chr2.2708 Acer truncatum HOM05D000003 ORTHO05D000022 6.0e-07 59.3 93 33.3
Atru.chr3.2193 Acer truncatum HOM05D000003 ORTHO05D000022 6.0e-07 59.3 93 36.6
Atru.chr3.2744 Acer truncatum HOM05D000003 ORTHO05D000022 6.0e-07 59.3 121 29.8
Atru.chr2.669 Acer truncatum HOM05D000003 ORTHO05D000004 7.8e-07 58.9 106 36.8
Atru.chr11.757 Acer truncatum HOM05D000003 ORTHO05D000004 1.0e-06 58.5 80 41.2
Atru.chr2.3435 Acer truncatum HOM05D000003 ORTHO05D000022 1.0e-06 58.5 110 33.6
Atru.chr2.971 Acer truncatum HOM05D000003 ORTHO05D000022 1.0e-06 58.5 108 31.5
Atru.chr9.658 Acer truncatum HOM05D000003 ORTHO05D000022 1.0e-06 58.5 107 36.4
Lalb_Chr05g0228371 Lupinus albus HOM05D000003 ORTHO05D000022 1.0e-06 58.5 104 34.6
Psat7g059240 Pisum sativum HOM05D000003 ORTHO05D000022 1.0e-06 58.5 134 32.1
Atru.chr2.1419 Acer truncatum HOM05D000003 ORTHO05D000022 1.3e-06 58.2 104 34.6
Atru.chr2.1762 Acer truncatum HOM05D000003 ORTHO05D000022 1.3e-06 58.2 103 35.0
Atru.chr7.170 Acer truncatum HOM05D000003 ORTHO05D000022 1.3e-06 58.2 108 33.3
Cpa.g.sc37.61 Carica papaya HOM05D011316 ORTHO05D010953 1.3e-06 58.2 65 46.2
Ciclev10021474m.g Citrus clementina HOM05D000003 ORTHO05D000022 1.3e-06 58.2 128 29.7
Atru.chr10.857 Acer truncatum HOM05D000003 ORTHO05D000004 1.7e-06 57.8 109 33.9
Atru.chr12.1173 Acer truncatum HOM05D000003 ORTHO05D000022 1.7e-06 57.8 104 39.4
SHI10451 Sapria himalayana HOM05D000155 ORTHO05D000022 1.7e-06 57.8 108 38.9
Atru.chr3.1522 Acer truncatum HOM05D000003 ORTHO05D000006 2.3e-06 57.4 106 35.8
CSS0020468 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 2.3e-06 57.4 168 26.2
Atru.chr3.1505 Acer truncatum HOM05D000003 ORTHO05D000022 3.0e-06 57.0 91 35.2
Aqoxy4G00752 Aquilegia oxysepala HOM05D000155 ORTHO05D000022 3.0e-06 57.0 103 33.0
Cpa.g.sc126.1 Carica papaya HOM05D013899 ORTHO05D011148 3.0e-06 57.0 35 74.3
THA.LOC104801226 Tarenaya hassleriana HOM05D007909 ORTHO05D000743 3.0e-06 57.0 116 33.6
Atru.chr8.1133 Acer truncatum HOM05D000003 ORTHO05D000022 3.9e-06 56.6 99 38.4
Cpa.g.sc1.70 Carica papaya HOM05D010740 ORTHO05D010953 3.9e-06 56.6 48 54.2
PGR083G1305 Punica granatum HOM05D007909 ORTHO05D000022 3.9e-06 56.6 103 32.0
Atru.chr9.1443 Acer truncatum HOM05D000003 ORTHO05D000022 5.1e-06 56.2 93 32.3
arahy.Tifrunner.gnm1.ann1.S50QTL Arachis hypogaea HOM05D000011 ORTHO05D002639 5.1e-06 56.2 104 32.7
arahy.Tifrunner.gnm1.ann1.I6PHI5 Arachis hypogaea HOM05D000003 ORTHO05D000022 6.6e-06 55.8 117 30.8
Cpa.g.sc22.58 Carica papaya HOM05D010740 ORTHO05D000004 6.6e-06 55.8 64 48.4
Lj4g0025065 Lotus japonicus HOM05D000155 ORTHO05D000022 8.6e-06 55.5 101 34.7


User provided reference genes

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