Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc395.3 Carica papaya HOM05D007219 ORTHO05D008995 8.5e-108 393.7 196 100.0
Duzib138G0301 Durio zibethinus HOM05D007219 ORTHO05D008995 6.8e-89 330.9 196 82.1
GSVIVG01030037001 Vitis vinifera HOM05D007219 ORTHO05D008995 1.1e-86 323.6 194 79.4
Thecc.01G189100 Theobroma cacao HOM05D007219 ORTHO05D008995 1.6e-85 319.7 196 79.6
TAR626G0546 Trochodendron aralioides HOM05D007219 ORTHO05D008995 1.6e-85 319.7 196 79.1
QL08p028873 Quercus lobata HOM05D007219 ORTHO05D008995 1.7e-84 316.2 192 78.6
Potri.014G161800 Populus trichocarpa HOM05D007219 ORTHO05D008995 3.8e-84 315.1 195 79.0
Gohir.A07G167500 Gossypium hirsutum HOM05D007219 ORTHO05D008995 6.6e-84 314.3 196 79.1
Gorai.001G193200 Gossypium raimondii HOM05D007219 ORTHO05D008995 8.6e-84 313.9 196 78.1
Prupe.3G202800 Prunus persica HOM05D007219 ORTHO05D008995 1.1e-83 313.5 194 79.4
Atru.chr6.3346 Acer truncatum HOM05D007219 ORTHO05D008995 1.5e-83 313.2 196 78.6
TWI36G0002 Tripterygium wilfordii HOM05D007219 ORTHO05D008995 1.9e-83 312.8 196 78.6
Gohir.D07G173000 Gossypium hirsutum HOM05D007219 ORTHO05D008995 2.5e-83 312.4 196 77.6
THA.LOC104826618 Tarenaya hassleriana HOM05D007219 ORTHO05D008995 2.8e-82 308.9 195 76.4
CSS0025035 Camellia sinensis var. sinensis HOM05D007219 ORTHO05D008995 4.7e-82 308.1 196 76.5
CsaV3_7G002720 Cucumis sativus L. HOM05D007219 ORTHO05D008995 4.0e-81 305.1 193 77.2
Hma1.2p1_0133F.1_g061230 Hydrangea macrophylla HOM05D007219 ORTHO05D008995 8.9e-81 303.9 194 74.7
Cc07_g19250 Coffea canephora HOM05D007219 ORTHO05D008995 1.2e-80 303.5 194 75.8
Dinv05845 Davidia involucrata HOM05D007219 ORTHO05D008995 3.4e-80 302.0 190 77.4
Manes.12G083700 Manihot esculenta HOM05D007219 ORTHO05D008995 5.8e-80 301.2 180 81.1
RcHm_v2.0_Chr2g0156861 Rosa chinensis HOM05D007219 ORTHO05D008995 1.3e-79 300.1 193 76.2
FAN14G1895 Fragaria x ananassa HOM05D007219 ORTHO05D008995 2.2e-79 299.3 194 74.7
FvH4_6g41300 Fragaria vesca HOM05D007219 ORTHO05D008995 2.9e-79 298.9 194 74.7
Nn1g03266 Nelumbo nucifera HOM05D007219 ORTHO05D008995 6.4e-79 297.7 188 76.6
MD09G1120700 Malus domestica HOM05D007219 ORTHO05D008995 8.3e-79 297.4 194 75.3
AT2G04845 Arabidopsis thaliana HOM05D007219 ORTHO05D008995 1.1e-78 297.0 193 74.1
Sp3g23430 Schrenkiella parvula HOM05D007219 ORTHO05D008995 1.9e-78 296.2 193 73.1
vmacro12114 Vaccinium macrocarpon HOM05D007219 ORTHO05D008995 5.4e-78 294.7 196 73.5
Eucgr.K00659 Eucalyptus grandis HOM05D007219 ORTHO05D008995 7.0e-78 294.3 188 76.6
Hund24148 Selenicereus undatus HOM05D007219 ORTHO05D008995 1.2e-77 293.5 188 77.1
AL3G42440 Arabidopsis lyrata HOM05D007219 ORTHO05D008995 1.6e-77 293.1 195 71.8
Carub.0003s2645 Capsella rubella HOM05D007219 ORTHO05D008995 1.6e-77 293.1 195 71.3
Glyma.13G025700 Glycine max HOM05D007219 ORTHO05D008995 1.6e-77 293.1 194 73.7
Migut.M00020 Erythranthe guttata HOM05D007219 ORTHO05D008995 6.0e-77 291.2 196 71.9
Peaxi162Scf00147g01822 Petunia axillaris HOM05D007219 ORTHO05D008995 6.0e-77 291.2 196 72.4
Lsat_1_v5_gn_5_121560 Lactuca sativa HOM05D007219 ORTHO05D008995 7.8e-77 290.8 196 71.4
CARHR102840 Cardamine hirsuta HOM05D007219 ORTHO05D008995 1.0e-76 290.4 193 71.5
Thhalv10002661m.g Eutrema salsugineum HOM05D007219 ORTHO05D008995 1.0e-76 290.4 195 71.8
CANSAT64G0298 Cannabis sativa HOM05D007219 ORTHO05D008995 1.3e-76 290.0 194 72.7
ECA234G4660 Erigeron canadensis HOM05D007219 ORTHO05D008995 1.3e-76 290.0 196 70.4
BolC3t17801H Brassica oleracea HOM05D007219 ORTHO05D008995 5.0e-76 288.1 195 69.2
Sed0018447 Sechium edule HOM05D007219 ORTHO05D008995 6.6e-76 287.7 170 82.4
Lj6g0005071 Lotus japonicus HOM05D007219 ORTHO05D008995 8.6e-76 287.3 194 71.1
CAN.G716.12 Capsicum annuum HOM05D007219 ORTHO05D008995 1.1e-75 287.0 196 70.9
HanXRQChr12g0373931 Helianthus annuus HOM05D007219 ORTHO05D008995 1.5e-75 286.6 193 71.5
Sopen05g025870 Solanum pennellii HOM05D007219 ORTHO05D008995 1.5e-75 286.6 196 69.9
Aa31LG1G4150 Aethionema arabicum HOM05D002708 ORTHO05D003516 2.5e-75 285.8 195 70.3
SalBow7G0564 Salvia bowleyana HOM05D007219 ORTHO05D008995 3.3e-75 285.4 194 71.1
Nitab4.5_0011106g0020 Nicotiana tabacum HOM05D007219 ORTHO05D008995 4.3e-75 285.0 196 71.4
PGR142G0267 Punica granatum HOM05D007219 ORTHO05D008995 5.6e-75 284.6 198 70.7
Phvul.006G013300 Phaseolus vulgaris HOM05D007219 ORTHO05D008995 2.8e-74 282.3 194 70.1
Oeu029809.1 Olea europaea HOM05D007219 ORTHO05D008995 3.6e-74 282.0 195 68.7
MSTRG.14930 Avicennia marina HOM05D007219 ORTHO05D008995 6.2e-74 281.2 196 69.4
Lalb_Chr22g0360881 Lupinus albus HOM05D007219 ORTHO05D008995 6.2e-74 281.2 195 69.2
Duzib133G0547 Durio zibethinus HOM05D007219 ORTHO05D008995 2.3e-73 279.3 187 75.9
CiPaw.03G278000 Carya illinoinensis HOM05D007219 ORTHO05D008995 4.0e-73 278.5 194 71.6
Aqoxy1G04023 Aquilegia oxysepala HOM05D007219 ORTHO05D008995 6.8e-73 277.7 194 69.6
MELO3C024213.2 Cucumis melo HOM05D007219 ORTHO05D008995 1.5e-72 276.6 193 71.5
arahy.Tifrunner.gnm1.ann1.N6EW4G Arachis hypogaea HOM05D007219 ORTHO05D008995 4.4e-72 275.0 192 69.3
Medtr3g083200 Medicago truncatula HOM05D007219 ORTHO05D008995 5.8e-72 274.6 194 69.1
Psat5g102680 Pisum sativum HOM05D007219 ORTHO05D008995 5.8e-72 274.6 194 69.1
Actinidia07878 Actinidia chinensis HOM05D007219 ORTHO05D008995 2.9e-71 272.3 170 78.2
Sabra14G0123400 Salix brachista HOM05D007219 ORTHO05D008995 3.7e-71 271.9 267 57.3
Haze_12702 Corylus avellana HOM05D007219 ORTHO05D008995 6.4e-71 271.2 187 71.7
TPR.G19322 Trifolium pratense HOM05D007219 ORTHO05D008995 6.4e-71 271.2 194 67.5
CDE10G1006 Ceratophyllum demersum HOM05D007219 ORTHO05D008995 7.0e-70 267.7 196 67.3
PGSC0003DMG400020758 Solanum tuberosum HOM05D007219 ORTHO05D008995 1.3e-68 263.5 171 74.3
DCAR_019229 Daucus carota HOM05D007219 ORTHO05D008995 1.7e-68 263.1 190 69.5
PSO302G0207 Papaver somniferum HOM05D007219 ORTHO05D008995 8.6e-68 260.8 180 71.1
HPP92_020392 Vanilla planifolia HOM05D007219 ORTHO05D008995 1.1e-67 260.4 177 71.8
AUR62017530 Chenopodium quinoa HOM05D007219 ORTHO05D008995 1.5e-67 260.0 257 54.1
COL.COLO4_04268 Corchorus olitorius HOM05D007219 ORTHO05D008995 1.9e-67 259.6 150 84.0
ATR0712G058 Amborella trichopoda HOM05D007219 ORTHO05D008995 3.3e-67 258.8 194 64.4
Ciclev10016673m.g Citrus clementina HOM05D007219 ORTHO05D008995 5.6e-67 258.1 156 78.2
FAN05G4854 Fragaria x ananassa HOM05D007219 ORTHO05D008995 7.5e-64 247.7 200 65.0
Os03g0194400 Oryza sativa ssp. japonica HOM05D007219 ORTHO05D008995 2.9e-63 245.7 176 68.8
QL08p028923 Quercus lobata HOM05D007219 ORTHO05D008995 1.9e-62 243.0 342 42.7
Dinv07849 Davidia involucrata HOM05D007219 ORTHO05D008995 5.1e-60 235.0 143 78.3
MBI16_g42309_MAGBIO Magnolia biondii HOM05D007219 ORTHO05D008995 5.1e-60 235.0 181 68.0
EL10Ac9g22747 Beta vulgaris HOM05D007219 ORTHO05D008995 1.1e-59 233.8 196 61.2
arahy.Tifrunner.gnm1.ann1.E78GDQ Arachis hypogaea HOM05D007219 ORTHO05D008995 4.0e-57 225.3 318 41.8
arahy.Tifrunner.gnm1.ann1.XZ9N91 Arachis hypogaea HOM05D007219 ORTHO05D008995 4.0e-57 225.3 318 41.8
Zm00001eb401150 Zea mays HOM05D007219 ORTHO05D008995 1.2e-56 223.8 150 70.7
SGA_v2.0_scaffold73G24522 Striga asiatica HOM05D007219 ORTHO05D008995 3.5e-53 212.2 168 63.7
ClCG02G002620 Citrullus lanatus HOM05D007219 ORTHO05D008995 3.9e-52 208.8 136 75.0
FAN02G0754 Fragaria x ananassa HOM05D007219 ORTHO05D008995 8.1e-50 201.1 194 55.2
AUR62015074 Chenopodium quinoa HOM05D007219 ORTHO05D008995 1.4e-49 200.3 137 70.8
SMO115G0308 Selaginella moellendorffii HOM05D007219 ORTHO05D008995 9.0e-49 197.6 170 57.1
Ah.14g082820 Amaranthus hybridus HOM05D007219 ORTHO05D008995 1.7e-47 193.4 136 68.4
Mapoly0089s0028 Marchantia polymorpha HOM05D007219 ORTHO05D008995 1.7e-47 193.4 170 57.1
Sc21g0000880 Simmondsia chinensis HOM05D007219 ORTHO05D008995 3.5e-45 185.7 111 78.4
VMungo0540G0477 Vigna mungo HOM05D007219 ORTHO05D008995 2.3e-44 183.0 191 51.8
Cfa014252 Carpinus fangiana HOM05D007219 ORTHO05D008995 1.3e-42 177.2 133 66.2
Ca_16365_v3 Cicer arietinum L. HOM05D007219 ORTHO05D008995 6.4e-39 164.9 121 66.9
Rhsim06G0172900 Rhododendron simsii HOM05D007219 ORTHO05D008995 6.0e-37 158.3 229 45.4
MCO15G116 Micromonas commoda HOM05D007219 ORTHO05D008995 1.9e-35 153.3 171 50.3
CBR_g31837 Chara braunii HOM05D007219 ORTHO05D008995 2.2e-31 139.8 277 32.9
Nitab4.5_0002877g0050 Nicotiana tabacum HOM05D007219 ORTHO05D008995 1.3e-28 130.6 91 72.5
MD17G1111700 Malus domestica HOM05D007219 ORTHO05D008995 1.1e-27 127.5 109 60.6
SEGI_01956 Sequoiadendron giganteum HOM05D007219 ORTHO05D008995 2.1e-26 123.2 82 64.6
CSS0035148 Camellia sinensis var. sinensis HOM05D007219 ORTHO05D008995 8.2e-26 121.3 85 70.6
Thhalv10003074m.g Eutrema salsugineum HOM05D007219 ORTHO05D008995 3.3e-19 99.4 114 50.9
MD17G1111600 Malus domestica HOM05D007219 ORTHO05D008995 3.3e-19 99.4 72 66.7
PRCOL_00004041 Prasinoderma coloniale HOM05D007219 ORTHO05D008995 5.3e-17 92.0 164 37.2
AagrBONN_evm.TU.Sc2ySwM_362.1409 Anthoceros agrestis HOM05D007219 ORTHO05D008995 4.5e-16 89.0 128 40.6
Actinidia09773 Actinidia chinensis HOM05D007219 ORTHO05D008995 4.2e-14 82.4 55 70.9
Cre03.g184151 Chlamydomonas reinhardtii HOM05D007219 ORTHO05D008995 5.1e-12 75.5 113 44.2
Oeu027288.1 Olea europaea HOM05D007219 ORTHO05D008995 2.2e-10 70.1 49 67.3
CSS0030489 Camellia sinensis var. sinensis HOM05D007219 ORTHO05D008995 1.5e-08 63.9 41 68.3
CSS0021882 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 1.3e-07 60.8 34 79.4


User provided reference genes

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