Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc39.98 Carica papaya HOM05D004296 ORTHO05D005045 3.3e-34 147.9 79 100.0
Cpa.g.sc45.44 Carica papaya HOM05D004296 ORTHO05D005045 5.6e-26 120.6 79 83.5
Haze_21601 Corylus avellana HOM05D004296 ORTHO05D005045 7.9e-12 73.6 79 50.6
Hma1.2p1_0896F.1_g234000 Hydrangea macrophylla HOM05D004296 ORTHO05D005045 1.0e-11 73.2 76 52.6
Haze_22818 Corylus avellana HOM05D004296 ORTHO05D005045 2.3e-11 72.0 78 50.0
Cfa013198 Carpinus fangiana HOM05D004296 ORTHO05D005045 3.0e-11 71.6 79 48.1
QL12p012797 Quercus lobata HOM05D004296 ORTHO05D005045 5.1e-11 70.9 76 47.4
CiPaw.08G074700 Carya illinoinensis HOM05D004296 ORTHO05D005045 6.7e-11 70.5 70 54.3
Duzib068G1191 Durio zibethinus HOM05D004296 ORTHO05D005045 1.9e-10 68.9 73 56.2
Atru.chr9.2192 Acer truncatum HOM05D004296 ORTHO05D005045 4.3e-10 67.8 70 54.3
Actinidia14560 Actinidia chinensis HOM05D004296 ORTHO05D005045 5.6e-10 67.4 75 49.3
CSS0003782 Camellia sinensis var. sinensis HOM05D004296 ORTHO05D005045 5.6e-10 67.4 78 48.7
FvH4_4g24221 Fragaria vesca HOM05D004296 ORTHO05D005045 7.4e-10 67.0 79 46.8
Thecc.03G278500 Theobroma cacao HOM05D004296 ORTHO05D005045 7.4e-10 67.0 73 56.2
CSS0030285 Camellia sinensis var. sinensis HOM05D004296 ORTHO05D005045 1.6e-09 65.9 78 47.4
Solyc08g081040.3 Solanum lycopersicum HOM05D004296 ORTHO05D005045 1.6e-09 65.9 74 47.3
Prupe.5G099900 Prunus persica HOM05D004296 ORTHO05D005045 2.1e-09 65.5 74 51.4
FAN12G3540 Fragaria x ananassa HOM05D004296 ORTHO05D005045 2.8e-09 65.1 79 46.8
Manes.01G061800 Manihot esculenta HOM05D004296 ORTHO05D005045 2.8e-09 65.1 78 50.0
TAR268G0002 Trochodendron aralioides HOM05D004296 ORTHO05D005045 2.8e-09 65.1 79 45.6
FvH4_5g02380 Fragaria vesca HOM05D004296 ORTHO05D005045 3.7e-09 64.7 79 45.6
Oeu009155.1 Olea europaea HOM05D004296 ORTHO05D005045 3.7e-09 64.7 70 48.6
TAR375G1065 Trochodendron aralioides HOM05D004296 ORTHO05D005045 3.7e-09 64.7 79 44.3
FAN07G0166 Fragaria x ananassa HOM05D004296 ORTHO05D005045 4.8e-09 64.3 79 45.6
Dinv38945 Davidia involucrata HOM05D004296 ORTHO05D005045 8.1e-09 63.5 79 46.8
Peaxi162Scf00119g00828 Petunia axillaris HOM05D004296 ORTHO05D005045 8.1e-09 63.5 73 50.7
SalBow1G8718 Salvia bowleyana HOM05D004296 ORTHO05D005045 8.1e-09 63.5 73 46.6
Nitab4.5_0001615g0200 Nicotiana tabacum HOM05D004296 ORTHO05D005045 1.4e-08 62.8 74 47.3
Oeu020615.1 Olea europaea HOM05D004296 ORTHO05D005045 3.1e-08 61.6 76 46.1
CAN.G774.35 Capsicum annuum HOM05D004296 ORTHO05D005045 6.9e-08 60.5 76 44.7
Lj8A231T11 Lonicera japonica HOM05D004296 ORTHO05D005045 6.9e-08 60.5 66 51.5
RcHm_v2.0_Chr7g0197731 Rosa chinensis HOM05D004296 ORTHO05D005045 6.9e-08 60.5 79 44.3
Lj8C228T3 Lonicera japonica HOM05D004296 ORTHO05D005045 9.0e-08 60.1 66 51.5
Sopen08g029360 Solanum pennellii HOM05D004296 ORTHO05D005045 9.0e-08 60.1 73 43.8
MBI18_g42175_MAGBIO Magnolia biondii HOM05D004296 ORTHO05D005045 1.2e-07 59.7 77 45.5
CSS0037206 Camellia sinensis var. sinensis HOM05D004296 ORTHO05D005045 1.5e-07 59.3 78 43.6
Cc10_g03910 Coffea canephora HOM05D004296 ORTHO05D005045 1.5e-07 59.3 73 47.9
Glyma.01G220000 Glycine max HOM05D004296 ORTHO05D005045 1.5e-07 59.3 74 52.7
QL05p087372 Quercus lobata HOM05D004296 ORTHO05D005045 1.5e-07 59.3 77 46.8
Rhsim02G0231000 Rhododendron simsii HOM05D004296 ORTHO05D005045 1.5e-07 59.3 75 42.7
Sopen04g002480 Solanum pennellii HOM05D004296 ORTHO05D005045 1.5e-07 59.3 74 45.9
Eucgr.D01846 Eucalyptus grandis HOM05D004296 ORTHO05D005045 2.0e-07 58.9 79 45.6
FAN04G1575 Fragaria x ananassa HOM05D004296 ORTHO05D005045 3.4e-07 58.2 79 41.8
Medtr6g011320 Medicago truncatula HOM05D004296 ORTHO05D005045 4.5e-07 57.8 72 54.2
DCAR_000614 Daucus carota HOM05D004296 ORTHO05D005045 7.6e-07 57.0 79 41.8
Sc01g0009550 Simmondsia chinensis HOM05D004296 ORTHO05D005045 7.6e-07 57.0 74 48.6
PGSC0003DMG403005999 Solanum tuberosum HOM05D004296 ORTHO05D005045 1.3e-06 56.2 74 45.9
Nn1g01503 Nelumbo nucifera HOM05D004296 ORTHO05D005045 2.2e-06 55.5 83 43.4
Nitab4.5_0011683g0020 Nicotiana tabacum HOM05D004296 ORTHO05D005045 2.9e-06 55.1 74 43.2
MSTRG.11985 Avicennia marina HOM05D004296 ORTHO05D005045 3.8e-06 54.7 74 45.9
Lalb_Chr20g0109121 Lupinus albus HOM05D004296 ORTHO05D005045 3.8e-06 54.7 72 51.4
PSO478G0046 Papaver somniferum HOM05D004296 ORTHO05D005045 3.8e-06 54.7 72 47.2
COL.COLO4_34461 Corchorus olitorius HOM05D001502 ORTHO05D002950 4.9e-06 54.3 58 58.6
Peaxi162Scf00014g00082 Petunia axillaris HOM05D004296 ORTHO05D005045 4.9e-06 54.3 73 42.5
PGSC0003DMG400012342 Solanum tuberosum HOM05D004296 ORTHO05D005045 8.4e-06 53.5 75 46.7


User provided reference genes

Program Settings