Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc39.92 Carica papaya HOM05D006484 ORTHO05D008002 1.2e-92 343.2 173 100.0
COL.COLO4_28946 Corchorus olitorius HOM05D006484 ORTHO05D008002 3.8e-67 258.5 172 75.6
Manes.17G122200 Manihot esculenta HOM05D006484 ORTHO05D008002 3.8e-67 258.5 171 76.0
arahy.Tifrunner.gnm1.ann1.ND36BV Arachis hypogaea HOM05D006484 ORTHO05D008002 4.2e-66 255.0 168 76.8
arahy.Tifrunner.gnm1.ann1.J6NIZK Arachis hypogaea HOM05D006484 ORTHO05D008002 7.1e-66 254.2 168 76.8
CiPaw.03G037700 Carya illinoinensis HOM05D006484 ORTHO05D008002 3.5e-65 251.9 169 74.6
Thecc.04G008700 Theobroma cacao HOM05D006484 ORTHO05D008002 4.6e-65 251.5 172 72.7
Gohir.D11G071200 Gossypium hirsutum HOM05D006484 ORTHO05D008002 7.9e-65 250.8 174 72.4
Gorai.007G076500 Gossypium raimondii HOM05D006484 ORTHO05D008002 7.9e-65 250.8 174 72.4
Gohir.A11G067300 Gossypium hirsutum HOM05D006484 ORTHO05D008002 1.0e-64 250.4 176 71.6
THA.LOC104805398 Tarenaya hassleriana HOM05D006484 ORTHO05D008002 1.0e-64 250.4 180 71.7
Duzib147G0204 Durio zibethinus HOM05D006484 ORTHO05D008002 6.7e-64 247.7 173 72.8
Ciclev10016148m.g Citrus clementina HOM05D006484 ORTHO05D008002 2.5e-63 245.7 172 72.1
TWI56G0797 Tripterygium wilfordii HOM05D006484 ORTHO05D008002 3.3e-63 245.4 168 73.2
FAN02G1518 Fragaria x ananassa HOM05D006484 ORTHO05D008002 5.6e-63 244.6 163 72.4
MSTRG.15510 Avicennia marina HOM05D006484 ORTHO05D008002 9.6e-63 243.8 166 74.1
FvH4_6g50620 Fragaria vesca HOM05D006484 ORTHO05D008002 2.1e-62 242.7 163 71.8
FAN14G3872 Fragaria x ananassa HOM05D006484 ORTHO05D008002 2.1e-62 242.7 163 71.8
PGR142G1659 Punica granatum HOM05D006484 ORTHO05D008002 3.7e-62 241.9 165 73.9
Prupe.3G283800 Prunus persica HOM05D006484 ORTHO05D008002 1.1e-61 240.4 167 70.1
Cfa007430 Carpinus fangiana HOM05D006484 ORTHO05D008002 3.1e-61 238.8 165 69.7
Haze_14667 Corylus avellana HOM05D006484 ORTHO05D008002 5.3e-61 238.0 168 69.0
RcHm_v2.0_Chr2g0171411 Rosa chinensis HOM05D006484 ORTHO05D008002 5.3e-61 238.0 167 71.3
CSS0043741 Camellia sinensis var. sinensis HOM05D006484 ORTHO05D008002 9.0e-61 237.3 160 70.6
FAN09G0334 Fragaria x ananassa HOM05D006484 ORTHO05D008002 9.0e-61 237.3 160 71.2
SGA_v2.0_scaffold30G12470 Striga asiatica HOM05D006484 ORTHO05D008002 9.0e-61 237.3 131 86.3
SalBow7G4444 Salvia bowleyana HOM05D006484 ORTHO05D008002 1.5e-60 236.5 163 71.8
Sabra16G0230700 Salix brachista HOM05D006484 ORTHO05D008002 2.6e-60 235.7 167 70.1
TAR629G1796 Trochodendron aralioides HOM05D006484 ORTHO05D008002 2.6e-60 235.7 171 69.0
Phvul.004G016700 Phaseolus vulgaris HOM05D006484 ORTHO05D008002 7.6e-60 234.2 144 77.1
VMungo0464G2075 Vigna mungo HOM05D006484 ORTHO05D008002 7.6e-60 234.2 153 75.2
Dinv33496 Davidia involucrata HOM05D006484 ORTHO05D008002 1.0e-59 233.8 164 70.7
Sed0007993 Sechium edule HOM05D006484 ORTHO05D008002 1.0e-59 233.8 161 72.0
Eucgr.I01814 Eucalyptus grandis HOM05D006484 ORTHO05D008002 1.3e-59 233.4 168 70.2
MD17G1035000 Malus domestica HOM05D006484 ORTHO05D008002 1.3e-59 233.4 162 70.4
Potri.017G073000 Populus trichocarpa HOM05D006484 ORTHO05D008002 1.7e-59 233.0 171 69.0
ClCG10G014230 Citrullus lanatus HOM05D006484 ORTHO05D008002 2.2e-59 232.6 159 72.3
HanXRQChr15g0474541 Helianthus annuus HOM05D006484 ORTHO05D008002 2.9e-59 232.3 170 69.4
Aa31LG10G9850 Aethionema arabicum HOM05D006484 ORTHO05D008002 3.8e-59 231.9 169 69.8
A09p48180 Brassica napus HOM05D006484 ORTHO05D008002 4.9e-59 231.5 180 67.2
QL02p076682 Quercus lobata HOM05D006484 ORTHO05D008002 4.9e-59 231.5 170 68.2
AT3G55250 Arabidopsis thaliana HOM05D006484 ORTHO05D008002 6.5e-59 231.1 174 67.8
A04p04700 Brassica napus HOM05D006484 ORTHO05D008002 6.5e-59 231.1 174 69.0
BraA04t16182Z Brassica rapa HOM05D006484 ORTHO05D008002 6.5e-59 231.1 174 69.0
Lsat_1_v5_gn_0_26201 Lactuca sativa HOM05D006484 ORTHO05D008002 6.5e-59 231.1 185 64.3
Nitab4.5_0005176g0030 Nicotiana tabacum HOM05D006484 ORTHO05D008002 8.4e-59 230.7 168 68.5
BcaC02g09737 Brassica carinata HOM05D006484 ORTHO05D008002 1.1e-58 230.3 176 68.8
C04p37040 Brassica napus HOM05D006484 ORTHO05D008002 1.1e-58 230.3 176 68.8
BolC4t25282H Brassica oleracea HOM05D006484 ORTHO05D008002 1.1e-58 230.3 176 68.8
BraA09t40274Z Brassica rapa HOM05D006484 ORTHO05D008002 1.1e-58 230.3 180 66.7
Migut.K01368 Erythranthe guttata HOM05D006484 ORTHO05D008002 1.1e-58 230.3 168 70.2
GSVIVG01032484001 Vitis vinifera HOM05D006484 ORTHO05D008002 1.1e-58 230.3 127 85.8
AL5G36370 Arabidopsis lyrata HOM05D006484 ORTHO05D008002 1.4e-58 229.9 174 68.4
Thhalv10010599m.g Eutrema salsugineum HOM05D006484 ORTHO05D008002 1.4e-58 229.9 182 65.9
Lj2g0018435 Lotus japonicus HOM05D006484 ORTHO05D008002 1.4e-58 229.9 162 70.4
Sopen02g031660 Solanum pennellii HOM05D006484 ORTHO05D008002 1.4e-58 229.9 165 69.7
Actinidia35740 Actinidia chinensis HOM05D006484 ORTHO05D008002 1.9e-58 229.6 131 80.9
Peaxi162Scf00129g00106 Petunia axillaris HOM05D006484 ORTHO05D008002 1.9e-58 229.6 163 72.4
Sp5g07210 Schrenkiella parvula HOM05D006484 ORTHO05D008002 1.9e-58 229.6 180 66.1
Sc10g0003790 Simmondsia chinensis HOM05D006484 ORTHO05D008002 1.9e-58 229.6 143 76.2
BcaC07g39842 Brassica carinata HOM05D006484 ORTHO05D008002 2.5e-58 229.2 171 68.4
MELO3C009955.2 Cucumis melo HOM05D006484 ORTHO05D008002 2.5e-58 229.2 157 70.1
Solyc02g086890.3 Solanum lycopersicum HOM05D006484 ORTHO05D008002 2.5e-58 229.2 165 69.7
unitig_88.g27777 Utricularia gibba HOM05D000190 ORTHO05D000113 2.5e-58 229.2 154 69.5
Lalb_Chr21g0319431 Lupinus albus HOM05D006484 ORTHO05D008002 3.2e-58 228.8 133 79.7
C08p30440 Brassica napus HOM05D006484 ORTHO05D008002 4.2e-58 228.4 179 65.9
CsaV3_3G042410 Cucumis sativus L. HOM05D006484 ORTHO05D008002 4.2e-58 228.4 157 69.4
Glyma.13G169000 Glycine max HOM05D006484 ORTHO05D008002 5.5e-58 228.0 166 68.7
CARHR165250 Cardamine hirsuta HOM05D006484 ORTHO05D008002 7.1e-58 227.6 174 66.7
Cc07_g02300 Coffea canephora HOM05D006484 ORTHO05D008002 7.1e-58 227.6 127 83.5
Hma1.2p1_0802F.1_g220370 Hydrangea macrophylla HOM05D006484 ORTHO05D008002 7.1e-58 227.6 178 65.7
Hund05806 Selenicereus undatus HOM05D006484 ORTHO05D008002 7.1e-58 227.6 131 81.7
BolC8t50667H Brassica oleracea HOM05D006484 ORTHO05D008002 9.3e-58 227.3 179 65.9
Nitab4.5_0003337g0080 Nicotiana tabacum HOM05D006484 ORTHO05D008002 9.3e-58 227.3 171 68.4
Rhsim08G0055200 Rhododendron simsii HOM05D006484 ORTHO05D008002 2.1e-57 226.1 184 62.5
PSO063G6163 Papaver somniferum HOM05D006484 ORTHO05D008002 2.7e-57 225.7 163 68.1
BcaB02g08436 Brassica carinata HOM05D006484 ORTHO05D008002 3.5e-57 225.3 172 68.6
FAN05G1767 Fragaria x ananassa HOM05D006484 ORTHO05D008002 3.5e-57 225.3 197 59.4
Aqoxy3G01007 Aquilegia oxysepala HOM05D006484 ORTHO05D008002 4.6e-57 224.9 177 65.0
CANSAT64G2071 Cannabis sativa HOM05D006484 ORTHO05D008002 6.0e-57 224.6 163 70.6
Glyma.19G009200 Glycine max HOM05D006484 ORTHO05D008002 6.0e-57 224.6 144 74.3
TPR.G2295 Trifolium pratense HOM05D006484 ORTHO05D008002 7.9e-57 224.2 152 71.1
PSO832G1464 Papaver somniferum HOM05D006484 ORTHO05D008002 1.8e-56 223.0 163 67.5
Lj7A591T78 Lonicera japonica HOM05D006484 ORTHO05D008002 2.3e-56 222.6 133 79.7
ECA246G1918 Erigeron canadensis HOM05D006484 ORTHO05D008002 3.0e-56 222.2 131 79.4
Carub.0005s2191 Capsella rubella HOM05D006484 ORTHO05D008002 6.7e-56 221.1 179 64.2
MBI16_g26453_MAGBIO Magnolia biondii HOM05D006484 ORTHO05D008002 8.7e-56 220.7 130 80.8
EL10Ac6g14629 Beta vulgaris HOM05D006484 ORTHO05D008002 4.3e-55 218.4 128 78.1
Ca_04198_v3 Cicer arietinum L. HOM05D006484 ORTHO05D008002 4.3e-55 218.4 142 74.6
PGSC0003DMG401000526 Solanum tuberosum HOM05D006484 ORTHO05D008002 5.7e-55 218.0 126 81.0
PGSC0003DMG402000526 Solanum tuberosum HOM05D006484 ORTHO05D008002 5.7e-55 218.0 126 81.0
DCAR_021681 Daucus carota HOM05D006484 ORTHO05D008002 3.1e-53 212.2 163 64.4
Ah.02g127510 Amaranthus hybridus HOM05D006484 ORTHO05D008002 2.6e-52 209.1 121 82.6
Medtr6g007180 Medicago truncatula HOM05D006484 ORTHO05D008002 3.4e-52 208.8 148 68.9
CDE05G1394 Ceratophyllum demersum HOM05D001719 ORTHO05D008883 1.0e-51 207.2 118 78.0
BolC3t16636H Brassica oleracea HOM05D006484 ORTHO05D008002 1.7e-51 206.5 177 61.6
Psat1g058640 Pisum sativum HOM05D006484 ORTHO05D008002 1.7e-51 206.5 127 76.4
ATR0730G086 Amborella trichopoda HOM05D006484 ORTHO05D008002 5.0e-51 204.9 126 76.2
Os05g0526200 Oryza sativa ssp. japonica HOM05D006484 ORTHO05D008002 4.2e-50 201.8 144 68.8
Zm00001eb215070 Zea mays HOM05D006484 ORTHO05D008002 3.5e-49 198.7 139 68.3
BolC7t43763H Brassica oleracea HOM05D006484 ORTHO05D008002 1.3e-48 196.8 197 55.3
BcaB01g00117 Brassica carinata HOM05D006484 ORTHO05D008002 1.8e-48 196.4 179 59.2
HPP92_024318 Vanilla planifolia HOM05D006484 ORTHO05D008002 1.4e-45 186.8 127 68.5
Nn4g22800 Nelumbo nucifera HOM05D006484 ORTHO05D008002 6.7e-40 167.9 133 65.4
Atru.chr6.2293 Acer truncatum HOM05D006484 ORTHO05D008002 5.3e-37 158.3 87 82.8
Mapoly0095s0016 Marchantia polymorpha HOM05D006484 ORTHO05D008002 3.9e-32 142.1 129 51.2
Pp3c21_1380 Physcomitrium patens HOM05D006484 ORTHO05D008002 3.3e-31 139.0 141 48.2
AagrBONN_evm.TU.Sc2ySwM_344.2636 Anthoceros agrestis HOM05D006484 ORTHO05D008002 5.7e-31 138.3 131 51.9
HPP92_024280 Vanilla planifolia HOM05D006484 ORTHO05D008002 3.1e-29 132.5 106 61.3
SMO165G0092 Selaginella moellendorffii HOM05D006484 ORTHO05D008002 9.1e-29 131.0 149 46.3
AUR62007841 Chenopodium quinoa HOM05D006484 ORTHO05D008002 7.7e-28 127.9 126 55.6
vmacro18241 Vaccinium macrocarpon HOM05D006484 ORTHO05D008002 1.3e-27 127.1 125 52.8
CBR_g163 Chara braunii HOM05D006484 ORTHO05D008002 1.5e-26 123.6 133 47.4
BcaC06g34142 Brassica carinata HOM05D006484 ORTHO05D008002 4.4e-23 112.1 139 47.5
arahy.Tifrunner.gnm1.ann1.QWBN9A Arachis hypogaea HOM05D006484 ORTHO05D008002 1.1e-18 97.4 60 76.7
CAN.G473.120 Capsicum annuum HOM05D006484 ORTHO05D008002 5.5e-18 95.1 57 80.7
AUR62003035 Chenopodium quinoa HOM05D006484 ORTHO05D008002 3.1e-13 79.3 43 76.7
TPR.G33278 Trifolium pratense HOM05D006484 ORTHO05D008002 3.1e-13 79.3 51 68.6
CAN.G685.18 Capsicum annuum HOM05D006484 ORTHO05D008002 1.2e-12 77.4 47 83.0
Cre03.g183400 Chlamydomonas reinhardtii HOM05D006484 ORTHO05D008002 3.5e-12 75.9 111 35.1
MD09G1034700 Malus domestica HOM05D006484 ORTHO05D008002 1.2e-09 67.4 70 51.4
arahy.Tifrunner.gnm1.ann1.5V94PQ Arachis hypogaea HOM05D005791 ORTHO05D008002 5.2e-08 62.0 34 82.4
PRCOL_00006041 Prasinoderma coloniale HOM05D006484 ORTHO05D008002 5.7e-07 58.5 130 31.5


User provided reference genes

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