Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc39.46 Carica papaya HOM05D005862 ORTHO05D007731 1.4e-116 422.9 206 100.0
Cfa013617 Carpinus fangiana HOM05D005862 ORTHO05D007731 1.2e-72 276.9 201 71.6
MD07G1304500 Malus domestica HOM05D005862 ORTHO05D007731 4.6e-72 275.0 182 73.1
EL10Ac3g06117 Beta vulgaris HOM05D005862 ORTHO05D007731 1.8e-71 273.1 188 72.9
Nitab4.5_0002302g0060 Nicotiana tabacum HOM05D005862 ORTHO05D007731 1.8e-71 273.1 190 71.1
Eucgr.A02953 Eucalyptus grandis HOM05D005862 ORTHO05D007731 2.3e-71 272.7 196 70.9
Haze_22244 Corylus avellana HOM05D005862 ORTHO05D002549 8.7e-71 270.8 218 66.1
FAN17G0149 Fragaria x ananassa HOM05D005862 ORTHO05D007731 1.1e-70 270.4 177 74.0
Gohir.D03G049400 Gossypium hirsutum HOM05D005862 ORTHO05D007731 1.1e-70 270.4 201 69.7
Thecc.05G207900 Theobroma cacao HOM05D005862 ORTHO05D007731 1.1e-70 270.4 201 69.7
Duzib177G0812 Durio zibethinus HOM05D005862 ORTHO05D007731 1.5e-70 270.0 206 68.9
FAN07G2680 Fragaria x ananassa HOM05D005862 ORTHO05D007731 1.5e-70 270.0 183 72.7
COL.COLO4_08905 Corchorus olitorius HOM05D005862 ORTHO05D007731 2.5e-70 269.2 216 66.7
Gohir.A02G138900 Gossypium hirsutum HOM05D005862 ORTHO05D007731 4.3e-70 268.5 201 69.2
THA.LOC104820358 Tarenaya hassleriana HOM05D005862 ORTHO05D007731 4.3e-70 268.5 205 69.3
Aa31LG8G4960 Aethionema arabicum HOM05D005862 ORTHO05D007731 5.7e-70 268.1 188 73.4
Peaxi162Scf01650g00056 Petunia axillaris HOM05D005862 ORTHO05D007731 5.7e-70 268.1 188 71.3
MSTRG.26941 Avicennia marina HOM05D005862 ORTHO05D007731 9.7e-70 267.3 193 68.4
Gorai.003G050800 Gossypium raimondii HOM05D005862 ORTHO05D007731 9.7e-70 267.3 200 69.0
Lalb_Chr25g0279841 Lupinus albus HOM05D005862 ORTHO05D007731 9.7e-70 267.3 196 69.4
Manes.08G165200 Manihot esculenta HOM05D005862 ORTHO05D007731 9.7e-70 267.3 192 69.3
GSVIVG01024457001 Vitis vinifera HOM05D005862 ORTHO05D007731 9.7e-70 267.3 204 66.7
A05p31680 Brassica napus HOM05D005862 ORTHO05D007731 1.3e-69 266.9 190 72.1
Dinv29179 Davidia involucrata HOM05D005862 ORTHO05D007731 1.3e-69 266.9 189 69.3
Ciclev10013854m.g Citrus clementina HOM05D005862 ORTHO05D007731 1.6e-69 266.5 198 70.7
DCAR_006500 Daucus carota HOM05D005862 ORTHO05D007731 2.8e-69 265.8 186 70.4
Prupe.6G174500 Prunus persica HOM05D005862 ORTHO05D007731 2.8e-69 265.8 193 69.4
Ca_24470_v3 Cicer arietinum L. HOM05D005862 ORTHO05D007731 3.7e-69 265.4 198 68.7
Medtr5g008300 Medicago truncatula HOM05D005862 ORTHO05D007731 3.7e-69 265.4 199 69.3
Hund09764 Selenicereus undatus HOM05D005862 ORTHO05D007731 4.8e-69 265.0 165 77.0
CSS0041877 Camellia sinensis var. sinensis HOM05D005862 ORTHO05D007731 1.1e-68 263.8 200 65.5
Glyma.11G013700 Glycine max HOM05D005862 ORTHO05D007731 1.1e-68 263.8 198 70.2
Sp3g16230 Schrenkiella parvula HOM05D005862 ORTHO05D007731 1.1e-68 263.8 201 69.2
MELO3C025691.2 Cucumis melo HOM05D005862 ORTHO05D007731 1.4e-68 263.5 194 68.6
Sed0009679 Sechium edule HOM05D005862 ORTHO05D007731 1.4e-68 263.5 194 69.1
CsaV3_6G018920 Cucumis sativus L. HOM05D005862 ORTHO05D007731 1.8e-68 263.1 189 68.3
AL3G31270 Arabidopsis lyrata HOM05D005862 ORTHO05D007731 3.1e-68 262.3 199 68.8
CAN.G303.67 Capsicum annuum HOM05D005862 ORTHO05D007731 3.1e-68 262.3 176 71.6
SGA_v2.0_scaffold44G16880 Striga asiatica HOM05D005862 ORTHO05D007731 3.1e-68 262.3 194 67.5
AT3G18110 Arabidopsis thaliana HOM05D005862 ORTHO05D007731 6.9e-68 261.2 199 68.8
TPR.G37938 Trifolium pratense HOM05D005862 ORTHO05D007731 6.9e-68 261.2 191 69.1
Thhalv10019896m.g Eutrema salsugineum HOM05D005862 ORTHO05D007731 9.1e-68 260.8 199 67.8
Psat2g187320 Pisum sativum HOM05D005862 ORTHO05D007731 1.2e-67 260.4 199 66.8
CANSAT11G1786 Cannabis sativa HOM05D005862 ORTHO05D007731 1.5e-67 260.0 182 69.2
Carub.0003s1784 Capsella rubella HOM05D005862 ORTHO05D007731 2.0e-67 259.6 201 68.7
CARHR093420 Cardamine hirsuta HOM05D005862 ORTHO05D007731 2.0e-67 259.6 199 67.8
Nitab4.5_0000021g0260 Nicotiana tabacum HOM05D005862 ORTHO05D007731 2.6e-67 259.2 219 62.6
PGR042G0369 Punica granatum HOM05D005862 ORTHO05D007731 2.6e-67 259.2 180 71.7
QL09p026590 Quercus lobata HOM05D005862 ORTHO05D007731 2.6e-67 259.2 201 69.2
RcHm_v2.0_Chr4g0421271 Rosa chinensis HOM05D005862 ORTHO05D007731 2.6e-67 259.2 189 68.3
SalBow4G1238 Salvia bowleyana HOM05D005862 ORTHO05D007731 2.6e-67 259.2 180 67.8
arahy.Tifrunner.gnm1.ann1.LMCB5G Arachis hypogaea HOM05D005862 ORTHO05D007731 3.4e-67 258.8 191 70.2
Sopen03g027570 Solanum pennellii HOM05D005862 ORTHO05D007731 3.4e-67 258.8 187 68.4
arahy.Tifrunner.gnm1.ann1.UAU06L Arachis hypogaea HOM05D005862 ORTHO05D007731 4.5e-67 258.5 191 70.2
ECA232G4753 Erigeron canadensis HOM05D005862 ORTHO05D007731 5.9e-67 258.1 197 65.5
Migut.F00109 Erythranthe guttata HOM05D005862 ORTHO05D007731 5.9e-67 258.1 193 67.9
unitig_747.g21705 Utricularia gibba HOM05D005862 ORTHO05D007731 5.9e-67 258.1 190 66.3
arahy.Tifrunner.gnm1.ann1.B0Y075 Arachis hypogaea HOM05D005862 ORTHO05D007731 7.7e-67 257.7 191 70.2
Oeu055444.1 Olea europaea HOM05D005862 ORTHO05D007731 7.7e-67 257.7 183 68.9
Phvul.002G036500 Phaseolus vulgaris HOM05D005862 ORTHO05D007731 7.7e-67 257.7 198 67.2
TWI60G0141 Tripterygium wilfordii HOM05D005862 ORTHO05D007731 1.0e-66 257.3 198 66.2
VMungo1215G3088 Vigna mungo HOM05D005862 ORTHO05D007731 1.0e-66 257.3 198 67.2
Potri.017G036400 Populus trichocarpa HOM05D005862 ORTHO05D007731 1.7e-66 256.5 185 69.2
BolC5t33517H Brassica oleracea HOM05D005862 ORTHO05D007731 2.2e-66 256.1 207 66.2
Sc25g0001110 Simmondsia chinensis HOM05D005862 ORTHO05D007731 2.9e-66 255.8 177 70.6
BolC5t33548H Brassica oleracea HOM05D005862 ORTHO05D007731 3.8e-66 255.4 189 70.4
FvH4_4g17300 Fragaria vesca HOM05D005862 ORTHO05D007731 3.8e-66 255.4 194 67.0
Aqoxy1G00072 Aquilegia oxysepala HOM05D005862 ORTHO05D007731 5.0e-66 255.0 186 68.8
Solyc03g096830.4 Solanum lycopersicum HOM05D005862 ORTHO05D007731 5.0e-66 255.0 187 67.4
Actinidia34295 Actinidia chinensis HOM05D005862 ORTHO05D007731 6.5e-66 254.6 200 65.0
LjContig00222g0010720 Lotus japonicus HOM05D005862 ORTHO05D007731 1.4e-65 253.4 199 66.3
PSO063G7658 Papaver somniferum HOM05D005862 ORTHO05D007731 1.9e-65 253.1 177 70.6
Potri.007G123900 Populus trichocarpa HOM05D005862 ORTHO05D007731 1.9e-65 253.1 201 64.7
HanXRQChr04g0111711 Helianthus annuus HOM05D005862 ORTHO05D007731 2.5e-65 252.7 193 66.3
FAN12G1215 Fragaria x ananassa HOM05D005862 ORTHO05D007731 4.2e-65 251.9 203 64.0
FAN12G4319 Fragaria x ananassa HOM05D005862 ORTHO05D007731 4.2e-65 251.9 203 64.0
Lsat_1_v5_gn_9_47361 Lactuca sativa HOM05D005862 ORTHO05D007731 9.4e-65 250.8 198 63.6
vmacro06486 Vaccinium macrocarpon HOM05D005862 ORTHO05D007731 1.6e-64 250.0 197 65.5
Atru.chr12.2039 Acer truncatum HOM05D005862 ORTHO05D007731 2.1e-64 249.6 165 75.8
Nn3g19139 Nelumbo nucifera HOM05D005862 ORTHO05D007731 2.1e-64 249.6 198 64.6
Lj2A679T10 Lonicera japonica HOM05D005862 ORTHO05D007731 6.1e-64 248.1 180 68.9
BraA05t22001Z Brassica rapa HOM05D005862 ORTHO05D007731 7.9e-64 247.7 201 66.2
AUR62002419 Chenopodium quinoa HOM05D005862 ORTHO05D007731 7.9e-64 247.7 232 56.5
Rhsim03G0219600 Rhododendron simsii HOM05D005862 ORTHO05D007731 2.3e-63 246.1 209 60.3
Ah.07g202930 Amaranthus hybridus HOM05D005862 ORTHO05D007731 1.5e-62 243.4 163 74.2
CDE01G0240 Ceratophyllum demersum HOM05D005862 ORTHO05D007731 1.5e-62 243.4 192 65.1
Sabra07G0100300 Salix brachista HOM05D005862 ORTHO05D007731 1.5e-62 243.4 188 64.4
Cc11_g03910 Coffea canephora HOM05D005862 ORTHO05D007731 4.4e-62 241.9 208 60.6
HPP92_027606 Vanilla planifolia HOM05D005862 ORTHO05D007731 7.4e-62 241.1 195 64.6
MBI04_g30800_MAGBIO Magnolia biondii HOM05D005862 ORTHO05D007731 5.3e-60 235.0 225 57.8
ATR0568G095 Amborella trichopoda HOM05D005862 ORTHO05D007731 2.0e-59 233.0 183 63.9
PGSC0003DMG400000542 Solanum tuberosum HOM05D005862 ORTHO05D007731 2.0e-59 233.0 156 71.8
AUR62021709 Chenopodium quinoa HOM05D005862 ORTHO05D007731 5.9e-59 231.5 168 68.5
Lj2C685T2 Lonicera japonica HOM05D005862 ORTHO05D007731 7.2e-57 224.6 170 67.1
Os06g0199100 Oryza sativa ssp. japonica HOM05D005862 ORTHO05D007731 1.4e-55 220.3 180 61.1
TAR375G0634 Trochodendron aralioides HOM05D005862 ORTHO05D007731 3.1e-52 209.1 132 78.0
HPP92_002379 Vanilla planifolia HOM05D005862 ORTHO05D007731 4.7e-48 195.3 127 75.6
SEGI_36659 Sequoiadendron giganteum HOM05D005862 ORTHO05D007731 5.2e-47 191.8 202 51.0
Atru.chr12.1739 Acer truncatum HOM05D005862 ORTHO05D007731 1.2e-43 180.6 109 81.7
AagrBONN_evm.TU.Sc2ySwM_344.2098 Anthoceros agrestis HOM05D005862 ORTHO05D007731 1.8e-39 166.8 196 45.9
SMO356G0443 Selaginella moellendorffii HOM05D005862 ORTHO05D007731 1.8e-39 166.8 186 43.5
Mapoly0068s0065 Marchantia polymorpha HOM05D005862 ORTHO05D007731 1.7e-37 160.2 179 48.6
CDE12G0098 Ceratophyllum demersum HOM05D005862 ORTHO05D007731 6.5e-34 148.3 98 68.4
Pp3c25_7340 Physcomitrium patens HOM05D005862 ORTHO05D007731 8.9e-31 137.9 193 38.9
CBR_g41643 Chara braunii HOM05D005862 ORTHO05D007731 1.4e-23 114.0 192 36.5
MBI10_g16708_MAGBIO Magnolia biondii HOM05D005862 ORTHO05D007731 6.4e-13 78.6 50 76.0
C05p47250 Brassica napus HOM05D005862 ORTHO05D007731 3.9e-10 69.3 40 72.5
BolC5t33451H Brassica oleracea HOM05D005862 ORTHO05D007731 3.9e-10 69.3 40 72.5


User provided reference genes

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