Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc39.10 Carica papaya HOM05D006133 ORTHO05D007855 1.7e-55 219.2 116 100.0
Cpa.g.sc27.45 Carica papaya HOM05D006133 ORTHO05D007855 4.8e-42 174.5 131 76.3
Thecc.06G188500 Theobroma cacao HOM05D006133 ORTHO05D007855 2.8e-34 148.7 131 67.2
TWI38G1277 Tripterygium wilfordii HOM05D006133 ORTHO05D007855 1.7e-31 139.4 132 62.1
Gohir.D10G026300 Gossypium hirsutum HOM05D006133 ORTHO05D007855 1.5e-30 136.3 132 62.1
Gorai.011G027600 Gossypium raimondii HOM05D006133 ORTHO05D007855 1.5e-30 136.3 132 62.1
Manes.16G026900 Manihot esculenta HOM05D006133 ORTHO05D007855 1.5e-30 136.3 131 60.3
COL.COLO4_31481 Corchorus olitorius HOM05D006133 ORTHO05D007855 2.5e-30 135.6 130 63.1
Gohir.A10G025600 Gossypium hirsutum HOM05D006133 ORTHO05D007855 2.5e-30 135.6 132 61.4
Atru.chr10.1894 Acer truncatum HOM05D006133 ORTHO05D007855 2.1e-29 132.5 131 60.3
Potri.011G051900 Populus trichocarpa HOM05D006133 ORTHO05D007855 6.1e-29 131.0 131 58.8
Dinv40551 Davidia involucrata HOM05D006133 ORTHO05D007855 8.8e-28 127.1 132 58.3
Lj1A1206T67 Lonicera japonica HOM05D006133 ORTHO05D007855 1.1e-27 126.7 132 57.6
CSS0047692 Camellia sinensis var. sinensis HOM05D006133 ORTHO05D007855 2.6e-27 125.6 131 57.3
Dinv07556 Davidia involucrata HOM05D006133 ORTHO05D007855 2.6e-27 125.6 132 56.8
Potri.004G042800 Populus trichocarpa HOM05D006133 ORTHO05D007855 4.4e-27 124.8 131 56.5
Actinidia05630 Actinidia chinensis HOM05D006133 ORTHO05D007855 1.3e-26 123.2 130 59.2
Haze_06477 Corylus avellana HOM05D006133 ORTHO05D007855 1.7e-26 122.9 133 54.9
Oeu057904.1 Olea europaea HOM05D006133 ORTHO05D007855 2.8e-26 122.1 132 55.3
Cfa000437 Carpinus fangiana HOM05D006133 ORTHO05D007855 3.7e-26 121.7 133 54.9
MD05G1313300 Malus domestica HOM05D006133 ORTHO05D007855 1.4e-25 119.8 132 54.5
QL05p040164 Quercus lobata HOM05D006133 ORTHO05D007855 1.4e-25 119.8 130 56.9
Prupe.4G046300 Prunus persica HOM05D006133 ORTHO05D007855 2.4e-25 119.0 132 56.1
THA.LOC104814218 Tarenaya hassleriana HOM05D006133 ORTHO05D007855 5.3e-25 117.9 132 53.0
Cc02_g13300 Coffea canephora HOM05D006133 ORTHO05D007855 9.1e-25 117.1 128 52.3
CiPaw.09G059200 Carya illinoinensis HOM05D006133 ORTHO05D007855 2.0e-24 115.9 132 56.1
Hma1.2p1_0785F.1_g217580 Hydrangea macrophylla HOM05D006133 ORTHO05D007855 2.6e-24 115.5 140 52.1
RcHm_v2.0_Chr5g0008281 Rosa chinensis HOM05D006133 ORTHO05D007855 4.5e-24 114.8 133 54.9
TAR628G0719 Trochodendron aralioides HOM05D006133 ORTHO05D007855 1.7e-23 112.8 132 53.8
Migut.M01145 Erythranthe guttata HOM05D006133 ORTHO05D007855 2.9e-23 112.1 125 56.8
MBI09_g12165_MAGBIO Magnolia biondii HOM05D006133 ORTHO05D007855 2.9e-23 112.1 131 54.2
FvH4_3g09320 Fragaria vesca HOM05D006133 ORTHO05D007855 5.0e-23 111.3 133 54.9
Peaxi162Scf00736g00427 Petunia axillaris HOM05D006133 ORTHO05D007855 1.1e-22 110.2 135 49.6
Nn1g08778 Nelumbo nucifera HOM05D006133 ORTHO05D007855 1.5e-22 109.8 132 53.0
Rhsim13G0177600 Rhododendron simsii HOM05D006133 ORTHO05D007855 1.9e-22 109.4 133 51.9
ECA234G2723 Erigeron canadensis HOM05D006133 ORTHO05D007855 4.2e-22 108.2 127 52.8
Sed0025328 Sechium edule HOM05D006133 ORTHO05D007855 4.2e-22 108.2 132 54.5
Glyma.13G179800 Glycine max HOM05D006133 ORTHO05D007855 7.2e-22 107.5 135 53.3
Phvul.002G234200 Phaseolus vulgaris HOM05D006133 ORTHO05D007855 7.2e-22 107.5 135 52.6
Nitab4.5_0003432g0010 Nicotiana tabacum HOM05D006133 ORTHO05D007855 9.4e-22 107.1 133 48.9
Glyma.07G196100 Glycine max HOM05D006133 ORTHO05D007855 1.2e-21 106.7 135 53.3
Thhalv10017234m.g Eutrema salsugineum HOM05D006133 ORTHO05D007855 1.6e-21 106.3 132 51.5
FAN16G1924 Fragaria x ananassa HOM05D006133 ORTHO05D007855 2.1e-21 105.9 138 52.9
HanXRQChr16g0517711 Helianthus annuus HOM05D006133 ORTHO05D007855 2.1e-21 105.9 103 57.3
BcaC02g07769 Brassica carinata HOM05D006133 ORTHO05D007855 3.6e-21 105.1 135 50.4
C04p63360 Brassica napus HOM05D006133 ORTHO05D007855 3.6e-21 105.1 135 50.4
Lsat_1_v5_gn_4_52940 Lactuca sativa HOM05D006133 ORTHO05D007855 3.6e-21 105.1 104 55.8
PSO478G5317 Papaver somniferum HOM05D006133 ORTHO05D007855 3.6e-21 105.1 123 51.2
BolC4t27810H Brassica oleracea HOM05D006133 ORTHO05D007855 4.7e-21 104.8 135 49.6
Lj4g0021405 Lotus japonicus HOM05D006133 ORTHO05D007855 4.7e-21 104.8 137 54.0
Solyc02g078290.4 Solanum lycopersicum HOM05D006133 ORTHO05D007855 4.7e-21 104.8 133 48.1
PGSC0003DMG400029689 Solanum tuberosum HOM05D006133 ORTHO05D007855 4.7e-21 104.8 133 47.4
CARHR127900 Cardamine hirsuta HOM05D006133 ORTHO05D007855 8.0e-21 104.0 133 51.1
PSO478G1675 Papaver somniferum HOM05D006133 ORTHO05D007855 8.0e-21 104.0 125 49.6
AT2G33793 Arabidopsis thaliana HOM05D006133 ORTHO05D007855 1.0e-20 103.6 133 50.4
Sopen02g023140 Solanum pennellii HOM05D006133 ORTHO05D007855 1.4e-20 103.2 133 47.4
arahy.Tifrunner.gnm1.ann1.Y5A5WX Arachis hypogaea HOM05D006133 ORTHO05D007855 1.8e-20 102.8 131 51.1
Nitab4.5_0007940g0050 Nicotiana tabacum HOM05D006133 ORTHO05D007855 1.8e-20 102.8 133 47.4
Hund23731 Selenicereus undatus HOM05D006133 ORTHO05D007855 1.8e-20 102.8 132 51.5
Sc05g0007700 Simmondsia chinensis HOM05D006133 ORTHO05D007855 2.3e-20 102.4 131 51.9
Hund23730 Selenicereus undatus HOM05D006133 ORTHO05D007855 3.0e-20 102.1 132 51.5
AL4G29540 Arabidopsis lyrata HOM05D006133 ORTHO05D007855 4.0e-20 101.7 132 49.2
BraA04t18104Z Brassica rapa HOM05D006133 ORTHO05D007855 4.0e-20 101.7 136 48.5
arahy.Tifrunner.gnm1.ann1.YAJ938 Arachis hypogaea HOM05D006133 ORTHO05D007855 5.2e-20 101.3 145 47.6
CAN.G1164.26 Capsicum annuum HOM05D006133 ORTHO05D007855 5.2e-20 101.3 133 47.4
ClCG03G006010 Citrullus lanatus HOM05D006133 ORTHO05D007855 6.8e-20 100.9 130 52.3
Duzib235G0895 Durio zibethinus HOM05D006133 ORTHO05D007855 1.2e-19 100.1 89 65.2
Sabra11G0035700 Salix brachista HOM05D006133 ORTHO05D007855 1.5e-19 99.8 119 52.1
Carub.0004s1546 Capsella rubella HOM05D006133 ORTHO05D007855 2.0e-19 99.4 129 48.8
MELO3C002599.2 Cucumis melo HOM05D006133 ORTHO05D007855 3.4e-19 98.6 97 60.8
AUR62017011 Chenopodium quinoa HOM05D006133 ORTHO05D007855 4.4e-19 98.2 134 49.3
CSS0042278 Camellia sinensis var. sinensis HOM05D006133 ORTHO05D007855 5.7e-19 97.8 122 50.8
AUR62014816 Chenopodium quinoa HOM05D006133 ORTHO05D007855 9.7e-19 97.1 134 48.5
VMungo0251G0712 Vigna mungo HOM05D006133 ORTHO05D007855 1.3e-18 96.7 135 48.9
CsaV3_1G012270 Cucumis sativus L. HOM05D006133 ORTHO05D007855 2.2e-18 95.9 130 50.8
CANSAT35G1333 Cannabis sativa HOM05D006133 ORTHO05D007855 4.8e-18 94.7 93 59.1
Ah.09g237330 Amaranthus hybridus HOM05D006133 ORTHO05D007855 6.3e-18 94.4 146 44.5
TPR.G12027 Trifolium pratense HOM05D006133 ORTHO05D007855 8.3e-18 94.0 131 48.9
Medtr4g088855 Medicago truncatula HOM05D006133 ORTHO05D007855 1.1e-17 93.6 131 48.1
ATR0584G083 Amborella trichopoda HOM05D006133 ORTHO05D007855 2.4e-17 92.4 125 44.8
PGR004G1018 Punica granatum HOM05D006133 ORTHO05D007855 2.4e-17 92.4 116 51.7
unitig_22.g6229 Utricularia gibba HOM05D006133 ORTHO05D007855 2.4e-17 92.4 103 55.3
A04p26010 Brassica napus HOM05D006133 ORTHO05D007855 1.0e-15 87.0 136 44.1
CDE04G1633 Ceratophyllum demersum HOM05D006133 ORTHO05D007855 1.0e-15 87.0 131 43.5
Cc01_g03530 Coffea canephora HOM05D006133 ORTHO05D007855 3.8e-15 85.1 89 53.9
Solyc02g078280.3 Solanum lycopersicum HOM05D006133 ORTHO05D007855 5.0e-15 84.7 90 55.6
Os03g0837800 Oryza sativa ssp. japonica HOM05D006133 ORTHO05D007855 8.5e-15 84.0 113 44.2
SMO353G0258 Selaginella moellendorffii HOM05D006133 ORTHO05D007855 1.1e-14 83.6 102 46.1
AagrBONN_evm.TU.Sc2ySwM_228.202 Anthoceros agrestis HOM05D006133 ORTHO05D007855 2.5e-14 82.4 129 40.3
Gohir.A11G286823 Gossypium hirsutum HOM05D006133 ORTHO05D007855 3.2e-14 82.0 67 73.1
Gohir.A01G166500 Gossypium hirsutum HOM05D006133 ORTHO05D007855 1.6e-13 79.7 67 70.1
Sp4g16180 Schrenkiella parvula HOM05D006133 ORTHO05D007855 6.1e-13 77.8 111 47.7
Lalb_Chr05g0218461 Lupinus albus HOM05D006133 ORTHO05D007855 8.0e-13 77.4 119 48.7
Zm00001eb063880 Zea mays HOM05D006133 ORTHO05D007855 3.0e-12 75.5 140 35.7
Ca_18541_v3 Cicer arietinum L. HOM05D006133 ORTHO05D007855 5.2e-12 74.7 94 51.1
BolC4t23106H Brassica oleracea HOM05D006133 ORTHO05D007855 2.0e-11 72.8 114 44.7
Ciclev10017918m.g Citrus clementina HOM05D006133 ORTHO05D007855 4.4e-11 71.6 45 75.6
FAN25G2154 Fragaria x ananassa HOM05D006133 ORTHO05D007855 9.8e-11 70.5 74 51.4
FAN11G1298 Fragaria x ananassa HOM05D006133 ORTHO05D007855 2.8e-10 68.9 78 48.7
FAN21G1061 Fragaria x ananassa HOM05D006133 ORTHO05D007855 3.7e-10 68.6 71 52.1
Cc01_g03500 Coffea canephora HOM05D006133 ORTHO05D007855 4.8e-10 68.2 64 60.9
GSVIVG01033625001 Vitis vinifera HOM05D006133 ORTHO05D007855 4.8e-10 68.2 75 56.0
SGA_v2.0_scaffold22G09717 Striga asiatica HOM05D006133 ORTHO05D007855 1.1e-09 67.0 99 49.5
EL10Ac8g20377 Beta vulgaris HOM05D006133 ORTHO05D007855 2.4e-09 65.9 70 51.4
Psat7g113640 Pisum sativum HOM05D006133 ORTHO05D007855 5.4e-09 64.7 101 46.5
Os07g0208801 Oryza sativa ssp. japonica HOM05D006133 ORTHO05D007855 7.7e-08 60.8 62 51.6
HPP92_006840 Vanilla planifolia HOM05D006133 ORTHO05D007855 7.7e-08 60.8 112 37.5
Mapoly0103s0052 Marchantia polymorpha HOM05D006133 ORTHO05D007855 1.5e-06 56.6 96 35.4
C04p15330 Brassica napus HOM05D006133 ORTHO05D007855 5.5e-06 54.7 72 44.4
BcaC02g11457 Brassica carinata HOM05D006133 ORTHO05D007855 7.2e-06 54.3 72 44.4
BcaB02g10593 Brassica carinata HOM05D006133 ORTHO05D007855 9.5e-06 53.9 109 36.7


User provided reference genes

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