Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc179.9 Carica papaya HOM05D003845 ORTHO05D004161 1.1e-34 149.4 76 100.0
Cpa.g.sc3785.2 Carica papaya HOM05D003845 ORTHO05D004161 1.1e-34 149.4 76 100.0
CiPaw.04G040900 Carya illinoinensis HOM05D003845 ORTHO05D004161 5.4e-26 120.6 75 82.7
CANSAT64G2814 Cannabis sativa HOM05D003845 ORTHO05D004161 2.5e-23 111.7 75 74.7
Haze_14141 Corylus avellana HOM05D003845 ORTHO05D004161 5.6e-23 110.5 75 76.0
Thecc.04G136100 Theobroma cacao HOM05D003845 ORTHO05D004161 5.6e-23 110.5 75 76.0
Manes.02G067500 Manihot esculenta HOM05D003845 ORTHO05D004161 7.3e-23 110.2 74 78.4
Dinv34837 Davidia involucrata HOM05D003845 ORTHO05D004161 1.2e-22 109.4 75 76.0
Potri.004G101250 Populus trichocarpa HOM05D003845 ORTHO05D004161 1.2e-22 109.4 75 74.7
Atru.chr8.887 Acer truncatum HOM05D003845 ORTHO05D004161 2.1e-22 108.6 76 73.7
Duzib133G1200 Durio zibethinus HOM05D003845 ORTHO05D004161 2.1e-22 108.6 75 76.0
TAR629G0674 Trochodendron aralioides HOM05D003845 ORTHO05D004161 2.1e-22 108.6 75 76.0
vmacro05567 Vaccinium macrocarpon HOM05D003845 ORTHO05D004161 2.1e-22 108.6 75 76.0
CARHR059600 Cardamine hirsuta HOM05D003845 ORTHO05D004161 2.8e-22 108.2 75 76.0
ClCG11G005440 Citrullus lanatus HOM05D003845 ORTHO05D004161 3.6e-22 107.8 75 76.0
Manes.07G074028 Manihot esculenta HOM05D003845 ORTHO05D004161 3.6e-22 107.8 74 75.7
GSVIVG01031064001 Vitis vinifera HOM05D003845 ORTHO05D004161 4.7e-22 107.5 75 74.7
RcHm_v2.0_Chr2g0162941 Rosa chinensis HOM05D003845 ORTHO05D004161 6.2e-22 107.1 75 73.3
Dinv33933 Davidia involucrata HOM05D003845 ORTHO05D004161 1.1e-21 106.3 75 74.7
FAN02G2813 Fragaria x ananassa HOM05D003845 ORTHO05D004161 1.4e-21 105.9 75 72.0
MD12G1002400 Malus domestica HOM05D003845 ORTHO05D004161 1.8e-21 105.5 75 73.3
MELO3C022095.2 Cucumis melo HOM05D003845 ORTHO05D004161 2.3e-21 105.1 75 74.7
CsaV3_5G039200 Cucumis sativus L. HOM05D003845 ORTHO05D004161 2.3e-21 105.1 75 73.3
QL02p051715 Quercus lobata HOM05D003845 ORTHO05D004161 2.3e-21 105.1 71 77.5
FvH4_6g45230 Fragaria vesca HOM05D003845 ORTHO05D004161 3.1e-21 104.8 75 70.7
FAN14G4373 Fragaria x ananassa HOM05D003845 ORTHO05D004161 3.1e-21 104.8 75 70.7
Aa31LG2G3530 Aethionema arabicum HOM05D003845 ORTHO05D004161 4.0e-21 104.4 75 72.0
Gohir.A07G071701 Gossypium hirsutum HOM05D003845 ORTHO05D004161 4.0e-21 104.4 71 77.5
Gohir.D07G076100 Gossypium hirsutum HOM05D003845 ORTHO05D004161 4.0e-21 104.4 71 77.5
Gorai.001G080300 Gossypium raimondii HOM05D003845 ORTHO05D004161 4.0e-21 104.4 71 77.5
Sed0012635 Sechium edule HOM05D003845 ORTHO05D004161 6.8e-21 103.6 75 73.3
Carub.0002s1343 Capsella rubella HOM05D003845 ORTHO05D004161 8.9e-21 103.2 75 72.0
TWI53G0876 Tripterygium wilfordii HOM05D003845 ORTHO05D004161 8.9e-21 103.2 75 69.3
Actinidia36313 Actinidia chinensis HOM05D003845 ORTHO05D004161 1.2e-20 102.8 75 74.7
AL2G25520 Arabidopsis lyrata HOM05D003845 ORTHO05D004161 1.2e-20 102.8 75 72.0
CSS0012709 Camellia sinensis var. sinensis HOM05D003845 ORTHO05D004161 1.5e-20 102.4 75 72.0
Lj2C445G6 Lonicera japonica HOM05D003845 ORTHO05D004161 1.5e-20 102.4 75 72.0
Sp5g22090 Schrenkiella parvula HOM05D003845 ORTHO05D004161 2.0e-20 102.1 75 72.0
Nn4g23790 Nelumbo nucifera HOM05D003845 ORTHO05D004161 4.4e-20 100.9 75 69.3
Prupe.7G002300 Prunus persica HOM05D003845 ORTHO05D004161 4.4e-20 100.9 75 68.0
A07p33800 Brassica napus HOM05D003845 ORTHO05D004161 5.8e-20 100.5 75 70.7
C06p43130 Brassica napus HOM05D003845 ORTHO05D004161 5.8e-20 100.5 75 70.7
BolC6t39126H Brassica oleracea HOM05D003845 ORTHO05D004161 5.8e-20 100.5 75 70.7
BraA07t31006Z Brassica rapa HOM05D003845 ORTHO05D004161 5.8e-20 100.5 75 70.7
arahy.Tifrunner.gnm1.ann1.4V7WUF Arachis hypogaea HOM05D003845 ORTHO05D004161 9.9e-20 99.8 73 67.1
arahy.Tifrunner.gnm1.ann1.UJVA95 Arachis hypogaea HOM05D003845 ORTHO05D004161 9.9e-20 99.8 73 67.1
Lj1g0009000 Lotus japonicus HOM05D003845 ORTHO05D004161 9.9e-20 99.8 76 68.4
MD14G1001900 Malus domestica HOM05D003845 ORTHO05D004161 9.9e-20 99.8 75 68.0
CAN.G625.4 Capsicum annuum HOM05D003845 ORTHO05D004161 1.3e-19 99.4 75 69.3
Lalb_Chr21g0317871 Lupinus albus HOM05D003845 ORTHO05D004161 1.3e-19 99.4 76 65.8
AT1G67140 Arabidopsis thaliana HOM05D003845 ORTHO05D004161 1.7e-19 99.0 75 69.3
Solyc02g085810.3 Solanum lycopersicum HOM05D003845 ORTHO05D004161 1.7e-19 99.0 75 68.0
Sopen02g030490 Solanum pennellii HOM05D003845 ORTHO05D004161 1.7e-19 99.0 75 68.0
THA.LOC104805559 Tarenaya hassleriana HOM05D003845 ORTHO05D004161 1.7e-19 99.0 75 68.0
Glyma.18G297900 Glycine max HOM05D003845 ORTHO05D004161 2.2e-19 98.6 76 68.4
Medtr7g406950 Medicago truncatula HOM05D003845 ORTHO05D004161 2.9e-19 98.2 76 67.1
VMungo1383G2489 Vigna mungo HOM05D003845 ORTHO05D004161 2.9e-19 98.2 76 68.4
Phvul.008G004700 Phaseolus vulgaris HOM05D003845 ORTHO05D004161 3.7e-19 97.8 76 67.1
Thhalv10017993m.g Eutrema salsugineum HOM05D003845 ORTHO05D004161 4.9e-19 97.4 75 69.3
Nitab4.5_0002288g0020 Nicotiana tabacum HOM05D003845 ORTHO05D004161 4.9e-19 97.4 75 66.7
Lsat_1_v5_gn_4_153700 Lactuca sativa HOM05D003845 ORTHO05D004161 6.4e-19 97.1 75 66.7
Peaxi162Scf00814g00242 Petunia axillaris HOM05D003845 ORTHO05D004161 6.4e-19 97.1 75 66.7
SGA_v2.0_scaffold33G13453 Striga asiatica HOM05D003845 ORTHO05D004161 1.9e-18 95.5 75 65.3
Ca_04078_v3 Cicer arietinum L. HOM05D003845 ORTHO05D004161 2.4e-18 95.1 76 63.2
Zm00001eb382690 Zea mays HOM05D003845 ORTHO05D004161 2.4e-18 95.1 75 65.3
Migut.H00208 Erythranthe guttata HOM05D003845 ORTHO05D004161 3.2e-18 94.7 75 64.0
Nitab4.5_0001569g0050 Nicotiana tabacum HOM05D003845 ORTHO05D004161 3.2e-18 94.7 75 65.3
Os06g0505302 Oryza sativa ssp. japonica HOM05D003845 ORTHO05D004161 3.2e-18 94.7 75 66.7
Hma1.2p1_0136F.1_g062170 Hydrangea macrophylla HOM05D003845 ORTHO05D004161 4.1e-18 94.4 75 68.0
Hma1.2p1_0136F.1_g062180 Hydrangea macrophylla HOM05D003845 ORTHO05D004161 4.1e-18 94.4 75 68.0
Sc23g0006880 Simmondsia chinensis HOM05D003845 ORTHO05D004161 4.1e-18 94.4 75 66.7
Aqoxy3G03940 Aquilegia oxysepala HOM05D003845 ORTHO05D004161 5.4e-18 94.0 75 61.3
PSO063G7466 Papaver somniferum HOM05D003845 ORTHO05D004161 9.2e-18 93.2 76 64.5
PSO782G1231 Papaver somniferum HOM05D003845 ORTHO05D004161 9.2e-18 93.2 76 64.5
ATR0564G046 Amborella trichopoda HOM05D003845 ORTHO05D004161 1.6e-17 92.4 75 60.0
HPP92_003934 Vanilla planifolia HOM05D003845 ORTHO05D004161 1.6e-17 92.4 75 64.0
HPP92_003935 Vanilla planifolia HOM05D003845 ORTHO05D004161 1.6e-17 92.4 75 64.0
CDE02G0049 Ceratophyllum demersum HOM05D003845 ORTHO05D004161 2.7e-17 91.7 76 64.5
Ah.10g037590 Amaranthus hybridus HOM05D003845 ORTHO05D004161 3.5e-17 91.3 65 70.8
ECA232G1957 Erigeron canadensis HOM05D003845 ORTHO05D004161 3.5e-17 91.3 71 64.8
PGR004G1392 Punica granatum HOM05D003845 ORTHO05D004161 3.5e-17 91.3 74 63.5
SalBow3G0178 Salvia bowleyana HOM05D003845 ORTHO05D004161 3.5e-17 91.3 75 61.3
EL10Ac2g04592 Beta vulgaris HOM05D003845 ORTHO05D004161 6.0e-17 90.5 75 64.0
EL10Ac2g04610 Beta vulgaris HOM05D003845 ORTHO05D004161 6.0e-17 90.5 75 64.0
AUR62008978 Chenopodium quinoa HOM05D003845 ORTHO05D004161 6.0e-17 90.5 75 64.0
Hund16134 Selenicereus undatus HOM05D003845 ORTHO05D004161 7.8e-17 90.1 75 65.3
AUR62014525 Chenopodium quinoa HOM05D003845 ORTHO05D004161 2.3e-16 88.6 75 61.3
Psat3g206280 Pisum sativum HOM05D003845 ORTHO05D004161 1.1e-15 86.3 68 64.7
unitig_899.g14510 Utricularia gibba HOM05D003845 ORTHO05D004161 1.5e-15 85.9 75 58.7
Cc07_g08900 Coffea canephora HOM05D003845 ORTHO05D004161 1.9e-15 85.5 75 60.0
CAN.G178.11 Capsicum annuum HOM05D007284 ORTHO05D009303 2.5e-15 85.1 73 64.4
Eucgr.F02484 Eucalyptus grandis HOM05D003845 ORTHO05D004161 7.3e-15 83.6 73 61.6
SEGI_31548 Sequoiadendron giganteum HOM05D003845 ORTHO05D004161 2.1e-14 82.0 70 55.7
HanXRQChr14g0438731 Helianthus annuus HOM05D003845 ORTHO05D004161 4.7e-14 80.9 75 58.7
SHI17842 Sapria himalayana HOM05D003845 ORTHO05D004161 8.9e-13 76.6 66 59.1
Pp3c15_3000 Physcomitrium patens HOM05D003845 ORTHO05D004161 9.2e-10 66.6 69 43.5
Mapoly0101s0033 Marchantia polymorpha HOM05D003845 ORTHO05D004161 1.3e-08 62.8 72 41.7
SMO239G0031 Selaginella moellendorffii HOM05D003845 ORTHO05D004161 2.3e-08 62.0 67 40.3
CBR_g31193 Chara braunii HOM05D003845 ORTHO05D004161 5.1e-08 60.8 61 47.5
Oeu052985.1 Olea europaea HOM05D003845 ORTHO05D004161 1.6e-06 55.8 35 71.4


User provided reference genes

Program Settings