Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc370.1 Carica papaya HOM05D005096 ORTHO05D006566 5.0e-85 317.8 165 100.0
Atru.chr5.1434 Acer truncatum HOM05D005096 ORTHO05D006566 5.4e-39 164.9 171 62.6
Ciclev10023868m.g Citrus clementina HOM05D005096 ORTHO05D006566 9.2e-39 164.1 174 59.8
Potri.005G209200 Populus trichocarpa HOM05D005096 ORTHO05D006566 1.3e-37 160.2 142 65.5
Thecc.01G279600 Theobroma cacao HOM05D005096 ORTHO05D006566 3.9e-37 158.7 166 60.2
Dinv32937 Davidia involucrata HOM05D005096 ORTHO05D006566 1.1e-36 157.1 125 65.6
COL.COLO4_09099 Corchorus olitorius HOM05D005096 ORTHO05D006566 2.5e-36 156.0 159 59.7
CSS0045500 Camellia sinensis var. sinensis HOM05D005096 ORTHO05D006566 4.3e-36 155.2 137 63.5
Prupe.8G241300 Prunus persica HOM05D005096 ORTHO05D006566 5.6e-36 154.8 139 61.9
ClCG07G000240 Citrullus lanatus HOM05D005096 ORTHO05D006566 2.8e-35 152.5 170 57.1
Sabra05G0159300 Salix brachista HOM05D005096 ORTHO05D006566 3.6e-35 152.1 176 56.8
Hma1.2p1_0257F.1_g103450 Hydrangea macrophylla HOM05D005096 ORTHO05D006566 4.7e-35 151.8 111 74.8
Gohir.D08G075900 Gossypium hirsutum HOM05D005096 ORTHO05D006566 1.1e-34 150.6 171 57.9
Gorai.004G080200 Gossypium raimondii HOM05D005096 ORTHO05D006566 1.1e-34 150.6 171 57.9
Hund05342 Selenicereus undatus HOM05D005096 ORTHO05D006566 3.1e-34 149.1 175 54.9
Cfa006136 Carpinus fangiana HOM05D005096 ORTHO05D006566 4.0e-34 148.7 168 53.0
Manes.05G076137 Manihot esculenta HOM05D005096 ORTHO05D006566 4.0e-34 148.7 151 60.3
Actinidia00750 Actinidia chinensis HOM05D005096 ORTHO05D006566 5.2e-34 148.3 137 63.5
Hund05386 Selenicereus undatus HOM05D005096 ORTHO05D006566 6.9e-34 147.9 129 63.6
Actinidia09139 Actinidia chinensis HOM05D005096 ORTHO05D006566 8.9e-34 147.5 136 62.5
Gohir.A08G067500 Gossypium hirsutum HOM05D005096 ORTHO05D006566 8.9e-34 147.5 169 55.0
Oeu022870.1 Olea europaea HOM05D005096 ORTHO05D006566 8.9e-34 147.5 143 64.3
Duzib133G0542 Durio zibethinus HOM05D005096 ORTHO05D006566 1.2e-33 147.1 169 56.2
Lsat_1_v5_gn_9_3760 Lactuca sativa HOM05D005096 ORTHO05D006566 1.2e-33 147.1 109 71.6
MD11G1286100 Malus domestica HOM05D005096 ORTHO05D006566 1.5e-33 146.7 167 50.9
CANSAT25G0791 Cannabis sativa HOM05D005096 ORTHO05D006566 2.6e-33 146.0 161 55.3
MELO3C014400.2 Cucumis melo HOM05D005096 ORTHO05D008790 3.4e-33 145.6 170 56.5
Lalb_Chr02g0142771 Lupinus albus HOM05D005096 ORTHO05D006566 3.4e-33 145.6 115 65.2
TWI23G0916 Tripterygium wilfordii HOM05D005096 ORTHO05D006566 3.4e-33 145.6 135 62.2
Haze_04712 Corylus avellana HOM05D005096 ORTHO05D006566 4.4e-33 145.2 164 52.4
GSVIVG01011085001 Vitis vinifera HOM05D005096 ORTHO05D006566 4.4e-33 145.2 126 63.5
RcHm_v2.0_Chr6g0291071 Rosa chinensis HOM05D005096 ORTHO05D006566 5.8e-33 144.8 163 52.1
Duzib138G0773 Durio zibethinus HOM05D005096 ORTHO05D006566 7.6e-33 144.4 120 67.5
FAN15G1882 Fragaria x ananassa HOM05D005096 ORTHO05D006566 7.6e-33 144.4 141 58.2
CsaV3_6G037120 Cucumis sativus L. HOM05D005096 ORTHO05D006566 1.3e-32 143.7 169 55.0
FvH4_2g23600 Fragaria vesca HOM05D005096 ORTHO05D006566 1.3e-32 143.7 124 61.3
FAN24G2260 Fragaria x ananassa HOM05D005096 ORTHO05D006566 1.3e-32 143.7 124 61.3
FAN20G2556 Fragaria x ananassa HOM05D005096 ORTHO05D006566 1.7e-32 143.3 124 61.3
FAN27G2515 Fragaria x ananassa HOM05D005096 ORTHO05D006566 1.7e-32 143.3 124 61.3
Ah.15g091940 Amaranthus hybridus HOM05D005096 ORTHO05D006566 2.9e-32 142.5 165 52.7
MBI19_g21295_MAGBIO Magnolia biondii HOM05D005096 ORTHO05D006566 3.8e-32 142.1 146 59.6
Medtr1g072270 Medicago truncatula HOM05D005096 ORTHO05D006566 3.8e-32 142.1 128 61.7
Lj2A1173G9 Lonicera japonica HOM05D005096 ORTHO05D006566 4.9e-32 141.7 133 60.2
PSO170G0567 Papaver somniferum HOM05D005096 ORTHO05D006566 4.9e-32 141.7 149 56.4
Aqoxy2G03326 Aquilegia oxysepala HOM05D005096 ORTHO05D006566 6.4e-32 141.4 170 52.4
vmacro02569 Vaccinium macrocarpon HOM05D005096 ORTHO05D006566 6.4e-32 141.4 144 57.6
PGR119G0033 Punica granatum HOM05D005096 ORTHO05D006566 8.4e-32 141.0 157 52.2
Sc05g0004960 Simmondsia chinensis HOM05D005096 ORTHO05D006566 8.4e-32 141.0 171 53.8
EL10Ac7g17230 Beta vulgaris HOM05D005096 ORTHO05D006566 1.1e-31 140.6 137 58.4
CiPaw.07G091400 Carya illinoinensis HOM05D005096 ORTHO05D006566 1.1e-31 140.6 140 58.6
Peaxi162Scf01607g00116 Petunia axillaris HOM05D005096 ORTHO05D006566 1.1e-31 140.6 146 58.9
PSO302G0140 Papaver somniferum HOM05D005096 ORTHO05D006566 2.4e-31 139.4 131 61.1
Rhsim13G0024600 Rhododendron simsii HOM05D005096 ORTHO05D006566 3.2e-31 139.0 152 57.2
SGA_v2.0_scaffold1G00471 Striga asiatica HOM05D005096 ORTHO05D006566 5.4e-31 138.3 109 70.6
arahy.Tifrunner.gnm1.ann1.2R7T4K Arachis hypogaea HOM05D005096 ORTHO05D006566 7.1e-31 137.9 141 54.6
HanXRQChr10g0282661 Helianthus annuus HOM05D005096 ORTHO05D006566 7.1e-31 137.9 109 66.1
Lj5g0021757 Lotus japonicus HOM05D005096 ORTHO05D006566 7.1e-31 137.9 174 50.6
Carub.0001s0230 Capsella rubella HOM05D005096 ORTHO05D006566 1.6e-30 136.7 158 54.4
CARHR002500 Cardamine hirsuta HOM05D005096 ORTHO05D006566 2.1e-30 136.3 158 54.4
AT1G03160 Arabidopsis thaliana HOM05D005096 ORTHO05D006566 2.7e-30 136.0 158 55.1
arahy.Tifrunner.gnm1.ann1.TN9YNV Arachis hypogaea HOM05D005096 ORTHO05D006566 2.7e-30 136.0 141 53.9
BolC8t46843H Brassica oleracea HOM05D005096 ORTHO05D006566 3.5e-30 135.6 170 54.7
CAN.G242.2 Capsicum annuum HOM05D005096 ORTHO05D006566 3.5e-30 135.6 142 56.3
Migut.D00294 Erythranthe guttata HOM05D005096 ORTHO05D006566 3.5e-30 135.6 109 67.0
Psat6g060000 Pisum sativum HOM05D005096 ORTHO05D006566 3.5e-30 135.6 138 57.2
A08p37450 Brassica napus HOM05D005096 ORTHO05D006566 4.6e-30 135.2 170 54.7
BraA08t35643Z Brassica rapa HOM05D005096 ORTHO05D006566 4.6e-30 135.2 170 54.7
C08p00440 Brassica napus HOM05D005096 ORTHO05D006566 6.0e-30 134.8 170 54.1
Aa31LG1G9370 Aethionema arabicum HOM05D005096 ORTHO05D006566 7.8e-30 134.4 154 57.1
AL1G12650 Arabidopsis lyrata HOM05D005096 ORTHO05D006566 1.0e-29 134.0 158 53.8
TPR.G9125 Trifolium pratense HOM05D005096 ORTHO05D006566 1.0e-29 134.0 105 69.5
SalBow4G0282 Salvia bowleyana HOM05D005096 ORTHO05D006566 1.3e-29 133.7 109 67.0
THA.LOC104801235 Tarenaya hassleriana HOM05D005096 ORTHO05D006566 1.3e-29 133.7 175 52.0
TAR633G0362 Trochodendron aralioides HOM05D005096 ORTHO05D006566 1.3e-29 133.7 155 55.5
Glyma.02G147400 Glycine max HOM05D005096 ORTHO05D006566 1.7e-29 133.3 166 54.8
DCAR_002736 Daucus carota HOM05D005096 ORTHO05D006566 2.3e-29 132.9 119 63.9
Thhalv10006729m.g Eutrema salsugineum HOM05D005096 ORTHO05D006566 2.3e-29 132.9 175 50.9
Cc01_g19500 Coffea canephora HOM05D005096 ORTHO05D006566 3.0e-29 132.5 179 50.8
Glyma.10G026400 Glycine max HOM05D005096 ORTHO05D006566 3.9e-29 132.1 170 54.1
Ca_09758_v3 Cicer arietinum L. HOM05D005096 ORTHO05D006566 6.6e-29 131.3 169 50.9
Sp1g02185 Schrenkiella parvula HOM05D005096 ORTHO05D006566 6.6e-29 131.3 156 53.8
VMungo0720G0024 Vigna mungo HOM05D005096 ORTHO05D006566 8.7e-29 131.0 128 62.5
Nitab4.5_0008435g0030 Nicotiana tabacum HOM05D005096 ORTHO05D006566 1.5e-28 130.2 152 53.3
PGSC0003DMG400012881 Solanum tuberosum HOM05D005096 ORTHO05D006566 1.9e-28 129.8 142 57.0
Sed0025205 Sechium edule HOM05D005096 ORTHO05D006566 2.5e-28 129.4 128 58.6
Nitab4.5_0000458g0050 Nicotiana tabacum HOM05D005096 ORTHO05D006566 9.6e-28 127.5 104 67.3
Phvul.007G172000 Phaseolus vulgaris HOM05D005096 ORTHO05D006566 9.6e-28 127.5 168 52.4
Sopen09g026860 Solanum pennellii HOM05D005096 ORTHO05D006566 1.3e-27 127.1 148 54.1
unitig_0.g1141 Utricularia gibba HOM05D005096 ORTHO05D003974 1.6e-27 126.7 107 66.4
MSTRG.21562 Avicennia marina HOM05D005096 ORTHO05D006566 2.1e-27 126.3 106 66.0
ECA247G0546 Erigeron canadensis HOM05D005096 ORTHO05D006566 3.6e-27 125.6 114 58.8
QL12p021914 Quercus lobata HOM05D005096 ORTHO05D006566 8.1e-27 124.4 161 50.9
Solyc09g065160.4 Solanum lycopersicum HOM05D005096 ORTHO05D006566 8.1e-27 124.4 148 53.4
CDE06G0317 Ceratophyllum demersum HOM05D005096 ORTHO05D006566 1.8e-26 123.2 107 62.6
HPP92_012091 Vanilla planifolia HOM05D003650 ORTHO05D004213 3.4e-25 119.0 167 49.7
ATR0626G051 Amborella trichopoda HOM05D005096 ORTHO05D006566 2.9e-24 115.9 119 53.8
Migut.D00341 Erythranthe guttata HOM05D005096 ORTHO05D006566 2.3e-21 106.3 96 62.5
AUR62043137 Chenopodium quinoa HOM05D005096 ORTHO05D006566 5.6e-20 101.7 122 49.2
AUR62043138 Chenopodium quinoa HOM05D005096 ORTHO05D006566 5.6e-20 101.7 122 49.2
AUR62036827 Chenopodium quinoa HOM05D005096 ORTHO05D006566 1.6e-19 100.1 151 43.7
Mapoly0002s0267 Marchantia polymorpha HOM05D005096 ORTHO05D006566 2.8e-19 99.4 115 50.4
SEGI_14404 Sequoiadendron giganteum HOM05D005096 ORTHO05D006566 1.2e-17 94.0 160 40.6
AagrBONN_evm.TU.Sc2ySwM_228.961 Anthoceros agrestis HOM05D005096 ORTHO05D006566 2.2e-16 89.7 102 51.0
Pp3c3_25850 Physcomitrium patens HOM05D005096 ORTHO05D006566 9.3e-15 84.3 123 42.3
Pp3c10_17390 Physcomitrium patens HOM05D005096 ORTHO05D006566 3.0e-13 79.3 108 41.7
CBR_g4009 Chara braunii HOM05D005096 ORTHO05D006566 6.7e-13 78.2 107 43.9
SMO147G0152 Selaginella moellendorffii HOM05D005096 ORTHO05D006566 1.3e-11 73.9 99 42.4
MD11G1311400 Malus domestica HOM05D005096 ORTHO05D006566 1.6e-11 73.6 49 73.5
Cre14.g616600 Chlamydomonas reinhardtii HOM05D005096 ORTHO05D006566 1.0e-08 64.3 98 34.7
PRCOL_00001755 Prasinoderma coloniale HOM05D005096 ORTHO05D006566 2.1e-06 56.6 96 37.5


User provided reference genes

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