Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc37.52 Carica papaya HOM05D000189 ORTHO05D007859 4.9e-57 224.2 107 100.0
Nn5g28246 Nelumbo nucifera HOM05D000189 ORTHO05D007859 5.4e-24 114.4 76 72.4
TAR628G1698 Trochodendron aralioides HOM05D000189 ORTHO05D007859 1.8e-22 109.4 95 58.9
Actinidia06600 Actinidia chinensis HOM05D000189 ORTHO05D007859 1.5e-21 106.3 77 64.9
Aa31LG3G17850 Aethionema arabicum HOM05D000189 ORTHO05D007859 1.5e-21 106.3 101 50.5
Psat5g058320 Pisum sativum HOM05D000189 ORTHO05D007859 2.5e-21 105.5 95 58.9
BcaC03g13240 Brassica carinata HOM05D000189 ORTHO05D007859 3.3e-21 105.1 76 64.5
C02p03720 Brassica napus HOM05D000189 ORTHO05D007859 3.3e-21 105.1 76 64.5
BolC2t06332H Brassica oleracea HOM05D000189 ORTHO05D007859 3.3e-21 105.1 76 64.5
THA.LOC104800276 Tarenaya hassleriana HOM05D000189 ORTHO05D007859 3.3e-21 105.1 73 63.0
Atru.chr4.1118 Acer truncatum HOM05D000189 ORTHO05D007859 7.4e-21 104.0 96 59.4
EL10Ac4g09653 Beta vulgaris HOM05D000189 ORTHO05D007859 1.3e-20 103.2 95 54.7
Medtr3g097060 Medicago truncatula HOM05D000189 ORTHO05D007859 1.3e-20 103.2 95 55.8
AUR62006916 Chenopodium quinoa HOM05D000189 ORTHO05D007859 1.6e-20 102.8 96 54.2
AL6G19440 Arabidopsis lyrata HOM05D000189 ORTHO05D007859 2.1e-20 102.4 73 65.8
Sp6g34160 Schrenkiella parvula HOM05D000189 ORTHO05D007859 2.1e-20 102.4 72 65.3
GSVIVG01022385001 Vitis vinifera HOM05D000189 ORTHO05D007859 2.1e-20 102.4 71 74.6
AT5G08710 Arabidopsis thaliana HOM05D000189 ORTHO05D007859 2.8e-20 102.1 81 61.7
arahy.Tifrunner.gnm1.ann1.50NT7J Arachis hypogaea HOM05D000189 ORTHO05D007859 2.8e-20 102.1 70 67.1
CiPaw.04G179600 Carya illinoinensis HOM05D000189 ORTHO05D007859 2.8e-20 102.1 74 66.2
Carub.0006s0768 Capsella rubella HOM05D000189 ORTHO05D007859 3.7e-20 101.7 73 65.8
Dinv06652 Davidia involucrata HOM05D000189 ORTHO05D007859 3.7e-20 101.7 85 58.8
CSS0023610 Camellia sinensis var. sinensis HOM05D000189 ORTHO05D007859 8.1e-20 100.5 89 59.6
COL.COLO4_12122 Corchorus olitorius HOM05D000189 ORTHO05D007859 1.1e-19 100.1 69 66.7
arahy.Tifrunner.gnm1.ann1.682KPN Arachis hypogaea HOM05D000189 ORTHO05D007859 1.4e-19 99.8 68 67.6
Thhalv10013591m.g Eutrema salsugineum HOM05D000189 ORTHO05D007859 1.8e-19 99.4 73 61.6
Aqoxy5G02356 Aquilegia oxysepala HOM05D000189 ORTHO05D007859 2.4e-19 99.0 81 65.4
AUR62000563 Chenopodium quinoa HOM05D000189 ORTHO05D007859 2.4e-19 99.0 96 53.1
Lj1g0005687 Lotus japonicus HOM05D000189 ORTHO05D007859 2.4e-19 99.0 95 57.9
Sc09g0002050 Simmondsia chinensis HOM05D000189 ORTHO05D007859 3.1e-19 98.6 96 56.2
BcaB05g21570 Brassica carinata HOM05D000189 ORTHO05D007859 5.3e-19 97.8 62 69.4
Phvul.009G151700 Phaseolus vulgaris HOM05D000189 ORTHO05D007859 6.9e-19 97.4 71 64.8
Haze_25388 Corylus avellana HOM05D000189 ORTHO05D007859 9.0e-19 97.1 70 68.6
Rhsim10G0130500 Rhododendron simsii HOM05D000189 ORTHO05D007859 1.2e-18 96.7 74 68.9
TPR.G7871 Trifolium pratense HOM05D000189 ORTHO05D007859 1.2e-18 96.7 95 55.8
BraA02t04966Z Brassica rapa HOM05D000189 ORTHO05D007859 2.0e-18 95.9 62 71.0
CARHR204300 Cardamine hirsuta HOM05D000189 ORTHO05D007859 2.6e-18 95.5 91 54.9
Thecc.01G143200 Theobroma cacao HOM05D000189 ORTHO05D007859 2.6e-18 95.5 69 63.8
Ca_17006_v3 Cicer arietinum L. HOM05D000189 ORTHO05D007859 3.4e-18 95.1 69 68.1
Gohir.A11G224808 Gossypium hirsutum HOM05D000189 ORTHO05D007859 3.4e-18 95.1 69 63.8
Gohir.D11G229200 Gossypium hirsutum HOM05D000189 ORTHO05D007859 3.4e-18 95.1 69 63.8
Gorai.003G068400 Gossypium raimondii HOM05D000189 ORTHO05D007859 3.4e-18 95.1 69 63.8
Glyma.04G206900 Glycine max HOM05D000189 ORTHO05D007859 4.5e-18 94.7 68 67.6
RcHm_v2.0_Chr2g0123961 Rosa chinensis HOM05D000189 ORTHO05D007859 4.5e-18 94.7 77 61.0
Ah.02g117830 Amaranthus hybridus HOM05D000189 ORTHO05D007859 9.9e-18 93.6 71 60.6
QL10p039723 Quercus lobata HOM05D000189 ORTHO05D007859 9.9e-18 93.6 67 67.2
ClCG04G001170 Citrullus lanatus HOM05D000189 ORTHO05D007859 1.7e-17 92.8 67 65.7
VMungo1309G2054 Vigna mungo HOM05D014460 ORTHO05D007859 1.7e-17 92.8 95 53.7
MD00G1127500 Malus domestica HOM05D000189 ORTHO05D007859 2.2e-17 92.4 68 64.7
Oeu042314.1 Olea europaea HOM05D000189 ORTHO05D007859 2.2e-17 92.4 103 46.6
Potri.005G071000 Populus trichocarpa HOM05D000189 ORTHO05D007859 2.2e-17 92.4 71 57.7
Lalb_Chr08g0237931 Lupinus albus HOM05D000189 ORTHO05D007859 2.9e-17 92.0 72 62.5
Prupe.4G282400 Prunus persica HOM05D000189 ORTHO05D007859 2.9e-17 92.0 83 56.6
Sabra05G0058100 Salix brachista HOM05D000189 ORTHO05D007859 4.9e-17 91.3 73 57.5
Cc00_g14750 Coffea canephora HOM05D000189 ORTHO05D007859 2.4e-16 89.0 89 48.3
Manes.17G018825 Manihot esculenta HOM05D000189 ORTHO05D007859 2.4e-16 89.0 63 65.1
Hma1.2p1_0073F.1_g038460 Hydrangea macrophylla HOM05D000189 ORTHO05D007859 3.2e-16 88.6 55 76.4
Lsat_1_v5_gn_1_80940 Lactuca sativa HOM05D000189 ORTHO05D007859 4.2e-16 88.2 94 50.0
FvH4_1g25640 Fragaria vesca HOM05D000189 ORTHO05D007859 5.5e-16 87.8 72 61.1
FAN19G0214 Fragaria x ananassa HOM05D000189 ORTHO05D007859 5.5e-16 87.8 72 61.1
FAN28G0421 Fragaria x ananassa HOM05D000189 ORTHO05D007859 5.5e-16 87.8 72 61.1
Migut.L00266 Erythranthe guttata HOM05D000189 ORTHO05D007859 9.3e-16 87.0 95 48.4
unitig_60.g25691 Utricularia gibba HOM05D000189 ORTHO05D007859 1.6e-15 86.3 107 44.9
Hma1.2p1_0073F.1_g038450 Hydrangea macrophylla HOM05D000189 ORTHO05D007859 2.1e-15 85.9 53 77.4
Sed0009877 Sechium edule HOM05D000189 ORTHO05D007859 2.1e-15 85.9 67 59.7
Migut.L00584 Erythranthe guttata HOM05D000189 ORTHO05D007859 3.5e-15 85.1 101 46.5
SGA_v2.0_scaffold244G44343 Striga asiatica HOM05D000189 ORTHO05D007859 3.5e-15 85.1 83 51.8
TWI79G0061 Tripterygium wilfordii HOM05D000189 ORTHO05D007859 3.5e-15 85.1 54 75.9
FAN26G1447 Fragaria x ananassa HOM05D000189 ORTHO05D007859 1.0e-14 83.6 72 58.3
MBI03_g11131_MAGBIO Magnolia biondii HOM05D000189 ORTHO05D007859 1.0e-14 83.6 66 62.1
Sopen05g034990 Solanum pennellii HOM05D000189 ORTHO05D007859 1.0e-14 83.6 53 69.8
DCAR_019974 Daucus carota HOM05D000189 ORTHO05D007859 1.8e-14 82.8 57 70.2
HanXRQChr01g0019121 Helianthus annuus HOM05D000189 ORTHO05D007859 2.3e-14 82.4 95 47.4
Eucgr.I00040 Eucalyptus grandis HOM05D000189 ORTHO05D007859 3.0e-14 82.0 102 45.1
ECA248G3490 Erigeron canadensis HOM05D000552 ORTHO05D007859 6.7e-14 80.9 55 69.1
SalBow7G4190 Salvia bowleyana HOM05D000189 ORTHO05D007859 1.5e-13 79.7 93 50.5
ATR0709G034 Amborella trichopoda HOM05D000189 ORTHO05D007859 1.9e-13 79.3 62 64.5
Peaxi162Scf00925g00013 Petunia axillaris HOM05D000189 ORTHO05D007859 2.5e-13 79.0 54 63.0
PSO210G6791 Papaver somniferum HOM05D000189 ORTHO05D007859 7.4e-13 77.4 64 56.2
CAN.G1464.5 Capsicum annuum HOM05D000189 ORTHO05D007859 1.3e-12 76.6 51 66.7
Zm00001eb197640 Zea mays HOM05D000189 ORTHO05D007859 3.7e-12 75.1 82 51.2
SEGI_34887 Sequoiadendron giganteum HOM05D000189 ORTHO05D007859 4.0e-11 71.6 58 60.3
PGR119G1265 Punica granatum HOM05D000189 ORTHO05D007859 9.0e-11 70.5 65 60.0
Os11g0545800 Oryza sativa ssp. japonica HOM05D000189 ORTHO05D007859 4.5e-10 68.2 73 52.1
BraA05t20873Z Brassica rapa HOM05D000189 ORTHO05D007859 2.9e-09 65.5 48 60.4
Pp3c14_25730 Physcomitrium patens HOM05D000189 ORTHO05D007859 2.9e-09 65.5 66 51.5
SMO144G0111 Selaginella moellendorffii HOM05D000189 ORTHO05D007859 2.9e-09 65.5 73 45.2
AagrBONN_evm.TU.Sc2ySwM_344.533 Anthoceros agrestis HOM05D000189 ORTHO05D007859 2.5e-08 62.4 52 59.6
A05p19680 Brassica napus HOM05D000189 ORTHO05D007859 2.5e-08 62.4 48 58.3
Mapoly0001s0080 Marchantia polymorpha HOM05D000189 ORTHO05D007859 4.6e-07 58.2 60 50.0


User provided reference genes

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