Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc37.103 Carica papaya HOM05D000004 ORTHO05D000002 5.6e-92 340.9 168 100.0
SHI02826 Sapria himalayana HOM05D000004 ORTHO05D000002 1.5e-20 103.6 96 53.1
Manes.10G090351 Manihot esculenta HOM05D000004 ORTHO05D000002 7.5e-20 101.3 107 44.9
Cpa.g.sc24.61 Carica papaya HOM05D000004 ORTHO05D000002 1.3e-19 100.5 103 48.5
Cpa.g.sc56.17 Carica papaya HOM05D000004 ORTHO05D000002 2.2e-19 99.8 107 53.3
Manes.04G053766 Manihot esculenta HOM05D000004 ORTHO05D000002 2.8e-19 99.4 110 49.1
Manes.04G037351 Manihot esculenta HOM05D000004 ORTHO05D000002 1.1e-18 97.4 107 43.0
SHI33292 Sapria himalayana HOM05D000004 ORTHO05D000002 2.4e-18 96.3 96 49.0
SHI49895 Sapria himalayana HOM05D000004 ORTHO05D000002 4.1e-18 95.5 93 47.3
SHI50554 Sapria himalayana HOM05D000004 ORTHO05D000002 4.1e-18 95.5 93 47.3
Manes.02G187850 Manihot esculenta HOM05D000004 ORTHO05D000002 7.0e-18 94.7 104 47.1
Manes.10G110180 Manihot esculenta HOM05D000004 ORTHO05D000002 1.2e-17 94.0 103 45.6
Cpa.g.sc3.90 Carica papaya HOM05D000004 ORTHO05D000002 1.6e-17 93.6 86 54.7
Cpa.g.sc23.138 Carica papaya HOM05D000004 ORTHO05D000002 2.7e-17 92.8 108 44.4
Cpa.g.sc21.152 Carica papaya HOM05D000004 ORTHO05D000002 3.5e-17 92.4 100 45.0
Manes.15G069950 Manihot esculenta HOM05D000004 ORTHO05D000002 3.5e-17 92.4 86 52.3
Cpa.g.sc2.141 Carica papaya HOM05D000004 ORTHO05D000002 5.0e-16 88.6 97 46.4
Cpa.g.sc2.91 Carica papaya HOM05D000004 ORTHO05D000002 9.5e-15 84.3 108 45.4
Cpa.g.sc33.107 Carica papaya HOM05D000004 ORTHO05D000002 1.6e-14 83.6 90 45.6
Manes.13G089210 Manihot esculenta HOM05D000004 ORTHO05D000002 2.1e-14 83.2 104 42.3
SHI54825 Sapria himalayana HOM05D000004 ORTHO05D000002 2.8e-14 82.8 80 48.8
SHI52889 Sapria himalayana HOM05D000004 ORTHO05D000002 6.1e-14 81.6 81 48.1
SHI35233 Sapria himalayana HOM05D000004 ORTHO05D000002 1.4e-13 80.5 93 44.1
SHI53972 Sapria himalayana HOM05D000004 ORTHO05D000002 6.8e-13 78.2 107 41.1
QL12p011078 Quercus lobata HOM05D000432 ORTHO05D000002 1.2e-12 77.4 87 41.4
SHI49581 Sapria himalayana HOM05D000004 ORTHO05D000002 3.4e-12 75.9 107 40.2
Cpa.g.sc598.2 Carica papaya HOM05D000004 ORTHO05D000002 5.7e-12 75.1 52 59.6
SHI41517 Sapria himalayana HOM05D000004 ORTHO05D000002 7.5e-12 74.7 94 42.6
SHI44756 Sapria himalayana HOM05D000004 ORTHO05D000002 9.8e-12 74.3 101 40.6
Cpa.g.sc18.29 Carica papaya HOM05D000004 ORTHO05D000002 2.2e-11 73.2 80 48.8
SHI10882 Sapria himalayana HOM05D000004 ORTHO05D000002 2.9e-11 72.8 107 40.2
Nn6g33421 Nelumbo nucifera HOM05D000004 ORTHO05D000002 4.9e-11 72.0 83 42.2
SHI46300 Sapria himalayana HOM05D000004 ORTHO05D000002 6.4e-11 71.6 107 39.3
Cpa.g.sc308.1 Carica papaya HOM05D000004 ORTHO05D000002 8.3e-11 71.2 68 47.1
Cpa.g.sc2.254 Carica papaya HOM05D000004 ORTHO05D000002 1.1e-10 70.9 95 37.9
Cpa.g.sc23.76 Carica papaya HOM05D000004 ORTHO05D000002 1.1e-10 70.9 81 42.0
Manes.16G001601 Manihot esculenta HOM05D000004 ORTHO05D000002 4.1e-10 68.9 63 47.6
Manes.01G005508 Manihot esculenta HOM05D000004 ORTHO05D000002 1.6e-09 67.0 90 35.6
SHI52724 Sapria himalayana HOM05D000004 ORTHO05D000002 7.8e-09 64.7 85 40.0
TWI31G1488 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 7.8e-09 64.7 81 38.3
TWI34G0287 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 7.8e-09 64.7 81 38.3
TWI38G0029 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 7.8e-09 64.7 81 38.3
TWI81G0785 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 7.8e-09 64.7 81 38.3
HanXRQChr06g0168021 Helianthus annuus HOM05D000004 ORTHO05D000002 1.0e-08 64.3 91 41.8
TPR.G39604 Trifolium pratense HOM05D000004 ORTHO05D000002 1.0e-08 64.3 72 41.7
Cpa.g.sc2481.1 Carica papaya HOM05D000004 ORTHO05D000002 2.3e-08 63.2 88 43.2
Sp7g21430 Schrenkiella parvula HOM05D000004 ORTHO05D000002 3.0e-08 62.8 94 40.4
SHI53513 Sapria himalayana HOM05D000004 ORTHO05D000002 5.0e-08 62.0 81 37.0
TPR.G9693 Trifolium pratense HOM05D000004 ORTHO05D000002 1.5e-07 60.5 88 35.2
Sp4g07510 Schrenkiella parvula HOM05D000004 ORTHO05D000002 1.9e-07 60.1 87 37.9
Psat5g149360 Pisum sativum HOM05D000004 ORTHO05D000002 2.5e-07 59.7 81 38.3
Psat5g245360 Pisum sativum HOM05D000004 ORTHO05D000002 3.3e-07 59.3 71 40.8
SEGI_19319 Sequoiadendron giganteum HOM05D006425 ORTHO05D007312 3.3e-07 59.3 73 47.9
SEGI_22423 Sequoiadendron giganteum HOM05D010666 ORTHO05D006902 3.3e-07 59.3 53 50.9
SEGI_24522 Sequoiadendron giganteum HOM05D000004 ORTHO05D000002 3.3e-07 59.3 68 48.5
SEGI_08047 Sequoiadendron giganteum HOM05D000004 ORTHO05D000002 5.6e-07 58.5 68 47.1
Ca_11979_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 9.5e-07 57.8 76 34.2
COL.COLO4_10142 Corchorus olitorius HOM05D000004 ORTHO05D000002 9.5e-07 57.8 65 38.5
SEGI_20098 Sequoiadendron giganteum HOM05D000004 ORTHO05D000002 9.5e-07 57.8 68 44.1
Psat4g090320 Pisum sativum HOM05D000004 ORTHO05D000002 1.2e-06 57.4 80 36.2
Nn4g22175 Nelumbo nucifera HOM05D049825 ORTHO05D000002 1.6e-06 57.0 96 34.4
Psat0s2641g0160 Pisum sativum HOM05D000004 ORTHO05D000002 1.6e-06 57.0 92 33.7
CsaV3_2G024670 Cucumis sativus L. HOM05D000004 ORTHO05D000002 2.1e-06 56.6 115 33.0
RcHm_v2.0_Chr5g0082941 Rosa chinensis HOM05D000004 ORTHO05D000002 2.8e-06 56.2 72 34.7
Hma1.2p1_0085F.1_g044720 Hydrangea macrophylla HOM05D000004 ORTHO05D000002 3.6e-06 55.8 83 33.7
PSO170G3542 Papaver somniferum HOM05D000004 ORTHO05D000002 3.6e-06 55.8 75 36.0
PSO675G6894 Papaver somniferum HOM05D000004 ORTHO05D000002 3.6e-06 55.8 79 31.6
PSO764G0260 Papaver somniferum HOM05D000004 ORTHO05D000002 3.6e-06 55.8 79 35.4
HanXRQChr15g0497421 Helianthus annuus HOM05D000004 ORTHO05D000002 4.7e-06 55.5 87 33.3
SHI18910 Sapria himalayana HOM05D000004 ORTHO05D000002 4.7e-06 55.5 87 37.9
SEGI_29632 Sequoiadendron giganteum HOM05D004538 ORTHO05D006068 4.7e-06 55.5 84 44.0
THA.LOC104814705 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 4.7e-06 55.5 90 37.8
CsaV3_UNG239520 Cucumis sativus L. HOM05D000004 ORTHO05D000002 6.2e-06 55.1 113 33.6
Psat4g198400 Pisum sativum HOM05D000004 ORTHO05D000002 6.2e-06 55.1 86 34.9
Psat5g079960 Pisum sativum HOM05D000004 ORTHO05D000002 6.2e-06 55.1 86 34.9
Psat5g135120 Pisum sativum HOM05D000004 ORTHO05D011729 6.2e-06 55.1 111 29.7
Sopen06g014260 Solanum pennellii HOM05D000004 ORTHO05D000002 6.2e-06 55.1 72 38.9
ECA248G3468 Erigeron canadensis HOM05D000004 ORTHO05D000002 8.0e-06 54.7 89 31.5
SEGI_22826 Sequoiadendron giganteum HOM05D000004 ORTHO05D000002 8.0e-06 54.7 68 44.1
VMungo1309G1131 Vigna mungo HOM05D000004 ORTHO05D000002 8.0e-06 54.7 87 36.8


User provided reference genes

Program Settings