Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc367.5 Carica papaya HOM05D006250 ORTHO05D007107 8.7e-60 233.4 116 100.0
Prupe.1G260300 Prunus persica HOM05D006250 ORTHO05D007107 1.6e-13 79.7 119 45.4
Dinv31115 Davidia involucrata HOM05D006250 ORTHO05D007107 2.3e-12 75.9 121 43.8
TAR371G0500 Trochodendron aralioides HOM05D006250 ORTHO05D007107 2.3e-12 75.9 119 40.3
Hma1.2p1_1049F.1_g251780 Hydrangea macrophylla HOM05D006250 ORTHO05D007107 9.8e-11 70.5 109 40.4
Hma1.2p1_1049F.1_g251790 Hydrangea macrophylla HOM05D006250 ORTHO05D007107 9.8e-11 70.5 109 40.4
Hma1.2p1_2649F.1_g326133 Hydrangea macrophylla HOM05D006250 ORTHO05D007107 9.8e-11 70.5 109 40.4
Hma1.2p1_2649F.1_g326135 Hydrangea macrophylla HOM05D006250 ORTHO05D007107 9.8e-11 70.5 109 40.4
ClCG09G022110 Citrullus lanatus HOM05D006250 ORTHO05D007107 1.7e-10 69.7 119 39.5
Ciclev10031015m.g Citrus clementina HOM05D006250 ORTHO05D007107 2.2e-10 69.3 118 42.4
TAR629G0559 Trochodendron aralioides HOM05D006250 ORTHO05D007107 2.2e-10 69.3 121 39.7
MD13G1086400 Malus domestica HOM05D006250 ORTHO05D007107 4.8e-10 68.2 119 41.2
PGSC0003DMG400015603 Solanum tuberosum HOM05D006250 ORTHO05D007107 4.8e-10 68.2 114 37.7
CSS0049978 Camellia sinensis var. sinensis HOM05D006250 ORTHO05D007107 8.3e-10 67.4 118 40.7
COL.COLO4_19523 Corchorus olitorius HOM05D006250 ORTHO05D007107 8.3e-10 67.4 116 42.2
GSVIVG01020179001 Vitis vinifera HOM05D006250 ORTHO05D007107 8.3e-10 67.4 133 39.8
MELO3C002989.2 Cucumis melo HOM05D006250 ORTHO05D007107 1.4e-09 66.6 117 38.5
Aqoxy3G03090 Aquilegia oxysepala HOM05D006250 ORTHO05D007107 5.4e-09 64.7 116 39.7
CAN.G1160.10 Capsicum annuum HOM05D006250 ORTHO05D007107 7.0e-09 64.3 113 39.8
Haze_12133 Corylus avellana HOM05D006250 ORTHO05D007107 7.0e-09 64.3 123 40.7
Sopen05g002190 Solanum pennellii HOM05D000912 ORTHO05D001232 7.0e-09 64.3 114 36.0
Solyc05g006170.4 Solanum lycopersicum HOM05D006250 ORTHO05D007107 2.0e-08 62.8 114 36.0
CsaV3_5G025030 Cucumis sativus L. HOM05D006250 ORTHO05D007107 2.7e-08 62.4 118 36.4
Thecc.02G242000 Theobroma cacao HOM05D006250 ORTHO05D007107 2.7e-08 62.4 116 41.4
Sabra08G0147200 Salix brachista HOM05D006250 ORTHO05D007107 3.5e-08 62.0 117 37.6
Duzib251G0023 Durio zibethinus HOM05D006250 ORTHO05D007107 5.9e-08 61.2 112 39.3
MD16G1085800 Malus domestica HOM05D006250 ORTHO05D007107 1.0e-07 60.5 119 42.0
FvH4_4g35070 Fragaria vesca HOM05D006250 ORTHO05D007107 1.3e-07 60.1 116 43.1
FAN12G0989 Fragaria x ananassa HOM05D006250 ORTHO05D007107 1.3e-07 60.1 116 43.1
Sed0020226 Sechium edule HOM05D006250 ORTHO05D007107 2.3e-07 59.3 117 36.8
FAN22G2376 Fragaria x ananassa HOM05D006250 ORTHO05D007107 2.9e-07 58.9 125 42.4
THA.LOC104816735 Tarenaya hassleriana HOM05D006250 ORTHO05D007107 2.9e-07 58.9 116 42.2
Potri.008G193700 Populus trichocarpa HOM05D006250 ORTHO05D007107 3.8e-07 58.5 117 35.9
Gohir.A05G319200 Gossypium hirsutum HOM05D006250 ORTHO05D007107 5.0e-07 58.2 117 41.9
Nn3g16985 Nelumbo nucifera HOM05D006250 ORTHO05D007107 5.0e-07 58.2 108 35.2
PSO063G2741 Papaver somniferum HOM05D006250 ORTHO05D007107 6.6e-07 57.8 122 36.9
QL03p066863 Quercus lobata HOM05D006250 ORTHO05D007107 6.6e-07 57.8 119 38.7
PSO832G4030 Papaver somniferum HOM05D006250 ORTHO05D007107 1.5e-06 56.6 122 36.1
CANSAT01G1928 Cannabis sativa HOM05D006250 ORTHO05D007107 1.9e-06 56.2 123 39.0
RcHm_v2.0_Chr4g0444691 Rosa chinensis HOM05D006250 ORTHO05D007107 2.5e-06 55.8 116 40.5
Carub.0001s0994 Capsella rubella HOM05D006250 ORTHO05D007107 3.3e-06 55.5 116 38.8
FAN07G1033 Fragaria x ananassa HOM05D006250 ORTHO05D007107 4.2e-06 55.1 116 41.4
Aa31LG2G10230 Aethionema arabicum HOM05D006250 ORTHO05D007107 7.2e-06 54.3 107 39.3
FAN17G0914 Fragaria x ananassa HOM05D006250 ORTHO05D007107 7.2e-06 54.3 125 41.6
Manes.05G091350 Manihot esculenta HOM05D006250 ORTHO05D007107 7.2e-06 54.3 74 47.3
SGA_v2.0_scaffold68G22967 Striga asiatica HOM05D006250 ORTHO05D007107 7.2e-06 54.3 127 36.2
SGA_v2.0_scaffold8G04258 Striga asiatica HOM05D006250 ORTHO05D007107 7.2e-06 54.3 127 36.2


User provided reference genes

Program Settings