Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc3656.1 Carica papaya HOM05D006894 ORTHO05D008724 1.2e-55 219.5 106 100.0
arahy.Tifrunner.gnm1.ann1.NZQI89 Arachis hypogaea HOM05D006894 ORTHO05D008724 1.9e-16 89.4 76 57.9
Dinv19376 Davidia involucrata HOM05D006894 ORTHO05D008724 1.9e-16 89.4 112 51.8
Solyc01g104060.3 Solanum lycopersicum HOM05D006894 ORTHO05D008724 5.4e-16 87.8 62 67.7
Sopen01g046470 Solanum pennellii HOM05D006894 ORTHO05D008724 5.4e-16 87.8 62 67.7
PGSC0003DMG400023767 Solanum tuberosum HOM05D006894 ORTHO05D008724 5.4e-16 87.8 62 67.7
Cfa005507 Carpinus fangiana HOM05D006894 ORTHO05D008724 9.2e-16 87.0 68 63.2
Psat7g062040 Pisum sativum HOM05D006894 ORTHO05D008724 1.2e-15 86.7 76 57.9
TWI14G1412 Tripterygium wilfordii HOM05D006894 ORTHO05D008724 1.2e-15 86.7 116 45.7
MD08G1235500 Malus domestica HOM05D006894 ORTHO05D008724 4.6e-15 84.7 66 60.6
arahy.Tifrunner.gnm1.ann1.7VS6FJ Arachis hypogaea HOM05D006894 ORTHO05D008724 7.8e-15 84.0 78 53.8
VMungo0251G0921 Vigna mungo HOM05D006894 ORTHO05D008724 7.8e-15 84.0 51 72.5
CAN.G798.8 Capsicum annuum HOM05D006894 ORTHO05D008724 1.0e-14 83.6 54 74.1
GSVIVG01022874001 Vitis vinifera HOM05D006894 ORTHO05D008724 1.7e-14 82.8 117 47.0
Duzib248G0689 Durio zibethinus HOM05D006894 ORTHO05D008724 2.3e-14 82.4 66 62.1
Phvul.002G249600 Phaseolus vulgaris HOM05D006894 ORTHO05D008724 2.3e-14 82.4 63 58.7
CSS0024184 Camellia sinensis var. sinensis HOM05D006894 ORTHO05D008724 3.0e-14 82.0 51 74.5
Medtr8g088790 Medicago truncatula HOM05D006894 ORTHO05D008724 3.0e-14 82.0 63 63.5
HanXRQChr09g0249011 Helianthus annuus HOM05D006894 ORTHO05D008724 3.9e-14 81.6 85 52.9
Glyma.05G168900 Glycine max HOM05D006894 ORTHO05D008724 5.1e-14 81.3 80 55.0
Nitab4.5_0000816g0080 Nicotiana tabacum HOM05D006894 ORTHO05D008724 5.1e-14 81.3 58 69.0
QL02p099211 Quercus lobata HOM05D006894 ORTHO05D008724 5.1e-14 81.3 62 64.5
Atru.chr6.614 Acer truncatum HOM05D006894 ORTHO05D008724 6.6e-14 80.9 53 69.8
CANSAT11G1074 Cannabis sativa HOM05D006894 ORTHO05D008724 6.6e-14 80.9 54 68.5
FAN04G0479 Fragaria x ananassa HOM05D006894 ORTHO05D008724 6.6e-14 80.9 82 53.7
Lsat_1_v5_gn_9_118621 Lactuca sativa HOM05D006894 ORTHO05D008724 8.6e-14 80.5 71 56.3
Lj9A304G82 Lonicera japonica HOM05D006894 ORTHO05D008724 8.6e-14 80.5 55 69.1
Ca_17824_v3 Cicer arietinum L. HOM05D006894 ORTHO05D008724 1.1e-13 80.1 48 77.1
FAN08G3638 Fragaria x ananassa HOM05D006894 ORTHO05D008724 1.1e-13 80.1 60 66.7
Thecc.02G114400 Theobroma cacao HOM05D006894 ORTHO05D008724 1.5e-13 79.7 57 66.7
Atru.chr6.599 Acer truncatum HOM05D006894 ORTHO05D008724 1.9e-13 79.3 53 67.9
ClCG09G014050 Citrullus lanatus HOM05D006894 ORTHO05D008724 1.9e-13 79.3 88 51.1
FAN18G4164 Fragaria x ananassa HOM05D006894 ORTHO05D008724 1.9e-13 79.3 82 52.4
DCAR_006702 Daucus carota HOM05D006894 ORTHO05D008724 2.5e-13 79.0 61 62.3
MELO3C014368.2 Cucumis melo HOM05D006894 ORTHO05D008724 3.3e-13 78.6 62 62.9
FvH4_5g29120 Fragaria vesca HOM05D006894 ORTHO05D008724 3.3e-13 78.6 82 52.4
Gohir.D02G214600 Gossypium hirsutum HOM05D006894 ORTHO05D008724 3.3e-13 78.6 64 60.9
Gorai.005G242400 Gossypium raimondii HOM05D006894 ORTHO05D008724 3.3e-13 78.6 64 60.9
Nitab4.5_0010336g0030 Nicotiana tabacum HOM05D006894 ORTHO05D008724 3.3e-13 78.6 51 72.5
TPR.G23092 Trifolium pratense HOM05D006894 ORTHO05D008724 3.3e-13 78.6 56 62.5
TAR628G1558 Trochodendron aralioides HOM05D006894 ORTHO05D008724 3.3e-13 78.6 57 63.2
ECA240G3758 Erigeron canadensis HOM05D006894 ORTHO05D008724 4.3e-13 78.2 57 59.6
THA.LOC104809620 Tarenaya hassleriana HOM05D006894 ORTHO05D008724 4.3e-13 78.2 88 51.1
CiPaw.05G048800 Carya illinoinensis HOM05D006894 ORTHO05D008724 5.6e-13 77.8 53 66.0
Nn1g08851 Nelumbo nucifera HOM05D006894 ORTHO05D008724 5.6e-13 77.8 58 65.5
CsaV3_6G037480 Cucumis sativus L. HOM05D006894 ORTHO05D008724 7.3e-13 77.4 51 70.6
Prupe.1G571400 Prunus persica HOM05D006894 ORTHO05D008724 9.5e-13 77.0 53 67.9
RcHm_v2.0_Chr7g0221781 Rosa chinensis HOM05D006894 ORTHO05D008724 9.5e-13 77.0 52 75.0
Lalb_Chr12g0204471 Lupinus albus HOM05D006894 ORTHO05D008724 1.2e-12 76.6 63 60.3
Carub.0002s0422 Capsella rubella HOM05D006894 ORTHO05D008724 1.6e-12 76.3 76 56.6
Ciclev10001270m.g Citrus clementina HOM05D006894 ORTHO05D008724 1.6e-12 76.3 65 61.5
Thhalv10023478m.g Eutrema salsugineum HOM05D006894 ORTHO05D008724 1.6e-12 76.3 75 53.3
vmacro01754 Vaccinium macrocarpon HOM05D006894 ORTHO05D008724 1.6e-12 76.3 72 56.9
BolC1t03726H Brassica oleracea HOM05D006894 ORTHO05D008724 2.8e-12 75.5 91 49.5
CARHR052050 Cardamine hirsuta HOM05D006894 ORTHO05D008724 2.8e-12 75.5 77 55.8
COL.COLO4_11781 Corchorus olitorius HOM05D006894 ORTHO05D008724 2.8e-12 75.5 70 58.6
AL2G15470 Arabidopsis lyrata HOM05D006894 ORTHO05D008724 3.6e-12 75.1 107 43.9
C01p37610 Brassica napus HOM05D006894 ORTHO05D008724 3.6e-12 75.1 91 48.4
A01p29780 Brassica napus HOM05D006894 ORTHO05D008724 8.1e-12 73.9 96 44.8
BraA01t03106Z Brassica rapa HOM05D006894 ORTHO05D008724 8.1e-12 73.9 96 44.8
Gohir.A03G193500 Gossypium hirsutum HOM05D006894 ORTHO05D008724 8.1e-12 73.9 64 57.8
Eucgr.G00568 Eucalyptus grandis HOM05D006894 ORTHO05D008724 1.1e-11 73.6 53 62.3
AT1G60990 Arabidopsis thaliana HOM05D006894 ORTHO05D008724 1.8e-11 72.8 54 63.0
Aa31LG2G9600 Aethionema arabicum HOM05D006894 ORTHO05D008724 2.3e-11 72.4 80 50.0
BcaC09g49347 Brassica carinata HOM05D006894 ORTHO05D008724 3.1e-11 72.0 96 44.8
PSO170G1552 Papaver somniferum HOM05D006894 ORTHO05D008724 3.1e-11 72.0 67 59.7
Sp2g03530 Schrenkiella parvula HOM05D006894 ORTHO05D008724 3.1e-11 72.0 51 66.7
PSO528G0189 Papaver somniferum HOM05D006894 ORTHO05D008724 4.0e-11 71.6 67 59.7
Manes.07G017700 Manihot esculenta HOM05D006894 ORTHO05D008724 1.2e-10 70.1 53 66.0
MSTRG.20303 Avicennia marina HOM05D006894 ORTHO05D008724 5.8e-10 67.8 89 44.9
MBI06_g01072_MAGBIO Magnolia biondii HOM05D006894 ORTHO05D008724 5.8e-10 67.8 51 64.7
BcaB04g20304 Brassica carinata HOM05D006894 ORTHO05D008724 2.9e-09 65.5 72 50.0
Migut.B00823 Erythranthe guttata HOM05D006894 ORTHO05D008724 6.4e-09 64.3 73 50.7
Sc15g0002580 Simmondsia chinensis HOM05D006894 ORTHO05D008724 1.1e-08 63.5 49 57.1
Oeu027798.1 Olea europaea HOM05D006894 ORTHO05D008724 3.2e-08 62.0 87 41.4
FAN13G2283 Fragaria x ananassa HOM05D006894 ORTHO05D008724 1.7e-06 56.2 80 43.8
ATR0665G083 Amborella trichopoda HOM05D006894 ORTHO05D008724 2.3e-06 55.8 76 46.1
CDE08G1218 Ceratophyllum demersum HOM05D006894 ORTHO05D008724 5.1e-06 54.7 51 51.0


User provided reference genes

Program Settings