Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc36.96 Carica papaya HOM05D007175 ORTHO05D009032 1.5e-269 932.2 443 100.0
Prupe.5G000900 Prunus persica HOM05D007175 ORTHO05D009032 1.6e-194 682.9 428 74.5
Dinv30325 Davidia involucrata HOM05D007175 ORTHO05D009032 1.9e-192 676.0 399 78.7
COL.COLO4_12263 Corchorus olitorius HOM05D007175 ORTHO05D009032 1.4e-190 669.8 405 77.3
Cfa014168 Carpinus fangiana HOM05D007175 ORTHO05D009032 5.3e-190 667.9 426 73.7
Thecc.08G097400 Theobroma cacao HOM05D007175 ORTHO05D009032 5.3e-190 667.9 422 75.6
FAN08G3457 Fragaria x ananassa HOM05D007175 ORTHO05D009032 9.0e-190 667.2 431 71.7
Duzib116G0712 Durio zibethinus HOM05D007175 ORTHO05D009032 3.8e-188 661.8 400 78.8
Haze_22891 Corylus avellana HOM05D007175 ORTHO05D009032 4.9e-188 661.4 429 73.0
Gohir.D01G086300 Gossypium hirsutum HOM05D007175 ORTHO05D009032 6.5e-188 661.0 416 76.4
GSVIVG01013462001 Vitis vinifera HOM05D007175 ORTHO05D009032 8.4e-188 660.6 425 73.2
FAN04G1040 Fragaria x ananassa HOM05D007175 ORTHO05D009032 3.2e-187 658.7 431 71.5
Gorai.002G111700 Gossypium raimondii HOM05D007175 ORTHO05D009032 4.2e-187 658.3 416 76.2
FAN13G2687 Fragaria x ananassa HOM05D007175 ORTHO05D009032 1.2e-186 656.8 426 71.6
Atru.chr13.18 Acer truncatum HOM05D007175 ORTHO05D009032 1.0e-185 653.7 396 76.0
Eucgr.F03631 Eucalyptus grandis HOM05D007175 ORTHO05D009032 3.0e-185 652.1 437 70.0
Actinidia37900 Actinidia chinensis HOM05D007175 ORTHO05D009032 2.5e-184 649.0 424 71.9
Oeu000737.1 Olea europaea HOM05D007175 ORTHO05D009032 2.5e-184 649.0 398 73.9
DCAR_013353 Daucus carota HOM05D007175 ORTHO05D009032 4.3e-184 648.3 420 70.7
RcHm_v2.0_Chr7g0217631 Rosa chinensis HOM05D007175 ORTHO05D009032 5.7e-184 647.9 396 74.7
QL02p016318 Quercus lobata HOM05D007175 ORTHO05D009032 2.2e-183 646.0 431 71.0
Nn5g31081 Nelumbo nucifera HOM05D007175 ORTHO05D009032 1.1e-182 643.7 396 75.3
LjContig00564g0015126 Lotus japonicus HOM05D007175 ORTHO05D009032 1.4e-182 643.3 423 70.4
CiPaw.07G130000 Carya illinoinensis HOM05D007175 ORTHO05D009032 3.1e-182 642.1 396 75.5
Sabra05G0201000 Salix brachista HOM05D007175 ORTHO05D009032 1.2e-181 640.2 437 68.9
Sed0015844 Sechium edule HOM05D007175 ORTHO05D009032 2.2e-180 636.0 432 68.1
Cc10_g00080 Coffea canephora HOM05D007175 ORTHO05D009032 2.9e-180 635.6 429 70.9
Lalb_Chr17g0347321 Lupinus albus HOM05D007175 ORTHO05D009032 2.5e-179 632.5 432 67.6
ClCG11G019270 Citrullus lanatus HOM05D007175 ORTHO05D009032 4.2e-179 631.7 433 67.2
Glyma.14G047400 Glycine max HOM05D007175 ORTHO05D009032 4.2e-179 631.7 429 67.4
CsaV3_4G037860 Cucumis sativus L. HOM05D007175 ORTHO05D009032 2.1e-178 629.4 433 67.7
Aqoxy5G03363 Aquilegia oxysepala HOM05D007175 ORTHO05D009032 7.9e-178 627.5 397 73.3
Lalb_Chr10g0105651 Lupinus albus HOM05D007175 ORTHO05D009032 1.0e-177 627.1 391 72.4
Rhsim07G0258300 Rhododendron simsii HOM05D007175 ORTHO05D009032 3.9e-177 625.2 393 73.8
Glyma.02G269500 Glycine max HOM05D007175 ORTHO05D009032 1.1e-176 623.6 425 67.1
A09p19640 Brassica napus HOM05D007175 ORTHO05D009032 2.5e-176 622.5 412 70.1
VMungo0647G1837 Vigna mungo HOM05D007175 ORTHO05D009032 2.5e-176 622.5 424 67.7
Ca_06102_v3 Cicer arietinum L. HOM05D007175 ORTHO05D009032 4.3e-176 621.7 429 67.4
THA.LOC104806865 Tarenaya hassleriana HOM05D007175 ORTHO05D009032 5.7e-176 621.3 423 67.4
Medtr5g085780 Medicago truncatula HOM05D007175 ORTHO05D009032 7.4e-176 620.9 435 66.2
THA.LOC104801648 Tarenaya hassleriana HOM05D007175 ORTHO05D009032 7.4e-176 620.9 402 69.9
BcaC04g21999 Brassica carinata HOM05D007175 ORTHO05D009032 1.3e-175 620.2 399 71.7
C09p25000 Brassica napus HOM05D007175 ORTHO05D009032 1.3e-175 620.2 399 71.7
Psat2g024960 Pisum sativum HOM05D007175 ORTHO05D009032 2.2e-175 619.4 430 66.3
TPR.G14442 Trifolium pratense HOM05D007175 ORTHO05D009032 6.3e-175 617.8 425 66.1
MELO3C017080.2 Cucumis melo HOM05D007175 ORTHO05D009032 8.2e-175 617.5 462 63.9
HanXRQChr14g0427501 Helianthus annuus HOM05D007175 ORTHO05D009032 1.8e-174 616.3 401 72.1
BcaB07g31081 Brassica carinata HOM05D007175 ORTHO05D009032 5.3e-174 614.8 398 71.4
BolC9t55392H Brassica oleracea HOM05D007175 ORTHO05D009032 9.1e-174 614.0 399 70.9
CAN.G1330.33 Capsicum annuum HOM05D007175 ORTHO05D009032 1.2e-173 613.6 395 72.4
Lsat_1_v5_gn_2_2721 Lactuca sativa HOM05D007175 ORTHO05D009032 1.5e-173 613.2 404 71.3
PSO782G3151 Papaver somniferum HOM05D007175 ORTHO05D009032 1.5e-173 613.2 408 68.9
CARHR285020 Cardamine hirsuta HOM05D007175 ORTHO05D009032 5.9e-173 611.3 432 67.4
Thhalv10003204m.g Eutrema salsugineum HOM05D007175 ORTHO05D009032 1.0e-172 610.5 426 66.4
arahy.Tifrunner.gnm1.ann1.YTK8KP Arachis hypogaea HOM05D007175 ORTHO05D009032 2.2e-172 609.4 425 65.9
arahy.Tifrunner.gnm1.ann1.BW2M8B Arachis hypogaea HOM05D000005 ORTHO05D009032 3.8e-172 608.6 425 65.9
AL8G19150 Arabidopsis lyrata HOM05D007175 ORTHO05D009032 8.5e-172 607.4 426 65.7
PSO063G3513 Papaver somniferum HOM05D007175 ORTHO05D009032 8.5e-172 607.4 393 69.7
ECA238G4354 Erigeron canadensis HOM05D007175 ORTHO05D009032 2.7e-170 602.4 427 66.0
TWI36G1138 Tripterygium wilfordii HOM05D007175 ORTHO05D009032 3.0e-169 599.0 389 71.5
Aa31LG9G12520 Aethionema arabicum HOM05D007175 ORTHO05D009032 3.9e-169 598.6 396 68.9
ATR0605G370 Amborella trichopoda HOM05D007175 ORTHO05D009032 4.1e-166 588.6 403 67.2
FAN18G0319 Fragaria x ananassa HOM05D007175 ORTHO05D009032 1.7e-164 583.2 426 64.8
BraA09t37575Z Brassica rapa HOM05D007175 ORTHO05D009032 3.8e-164 582.0 414 67.6
Ciclev10003552m.g Citrus clementina HOM05D007175 ORTHO05D009032 1.9e-163 579.7 431 66.1
CSS0024225 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 1.2e-162 577.0 394 70.6
Gohir.A01G101333 Gossypium hirsutum HOM05D007175 ORTHO05D009032 1.0e-161 573.9 416 68.3
Os02g0592200 Oryza sativa ssp. japonica HOM05D007175 ORTHO05D009032 3.9e-161 572.0 398 65.3
Ah.14g086450 Amaranthus hybridus HOM05D007175 ORTHO05D009032 1.5e-160 570.1 416 63.7
Potri.005G259700 Populus trichocarpa HOM05D007175 ORTHO05D009032 1.5e-160 570.1 433 64.7
AT5G42370 Arabidopsis thaliana HOM05D007175 ORTHO05D009032 7.4e-160 567.8 402 66.4
AUR62035193 Chenopodium quinoa HOM05D007175 ORTHO05D009032 2.4e-158 562.8 398 65.6
AUR62042532 Chenopodium quinoa HOM05D007175 ORTHO05D009032 3.8e-156 555.4 404 63.6
FvH4_5g26760 Fragaria vesca HOM05D007175 ORTHO05D009032 2.7e-154 549.3 426 62.7
BcaNung05249 Brassica carinata HOM05D007175 ORTHO05D009032 2.3e-153 546.2 398 66.3
CANSAT25G0321 Cannabis sativa HOM05D007175 ORTHO05D009032 4.5e-149 531.9 443 60.9
HPP92_018876 Vanilla planifolia HOM05D007175 ORTHO05D009032 1.2e-144 517.3 400 61.8
AagrBONN_evm.TU.Sc2ySwM_117.3655 Anthoceros agrestis HOM05D007175 ORTHO05D009032 7.0e-142 508.1 403 57.6
CSS0000573 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 2.0e-141 506.5 385 66.0
EL10Ac1g01857 Beta vulgaris HOM05D007175 ORTHO05D009032 5.9e-141 505.0 392 62.8
Lj4A814G51 Lonicera japonica HOM05D007175 ORTHO05D009032 2.3e-140 503.1 302 78.5
CSS0003113 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 3.3e-139 499.2 385 65.2
Mapoly0013s0050 Marchantia polymorpha HOM05D007175 ORTHO05D009032 9.5e-139 497.7 405 57.5
CSS0005819 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 1.2e-138 497.3 382 65.4
TAR376G0324 Trochodendron aralioides HOM05D007175 ORTHO05D009032 2.3e-137 493.0 325 72.9
Manes.18G000500 Manihot esculenta HOM05D007175 ORTHO05D009032 5.2e-137 491.9 311 73.6
Zm00001eb245810 Zea mays HOM05D007175 ORTHO05D009032 5.2e-137 491.9 316 68.7
Phvul.008G212600 Phaseolus vulgaris HOM05D007175 ORTHO05D009032 8.9e-137 491.1 323 70.9
SMO259G0040 Selaginella moellendorffii HOM05D007175 ORTHO05D009032 7.8e-133 478.0 407 55.3
Sp7g08160 Schrenkiella parvula HOM05D007175 ORTHO05D009032 1.5e-128 463.8 308 70.5
Carub.0008s0679 Capsella rubella HOM05D007175 ORTHO05D009032 7.5e-128 461.5 310 69.4
Pp3c5_8650 Physcomitrium patens HOM05D007175 ORTHO05D009032 1.9e-126 456.8 398 54.0
CBR_g4433 Chara braunii HOM05D007175 ORTHO05D009032 2.1e-109 400.2 372 49.5
HPP92_018864 Vanilla planifolia HOM05D007175 ORTHO05D009032 9.3e-102 374.8 228 73.7
PSO063G1612 Papaver somniferum HOM05D007175 ORTHO05D009032 1.1e-91 341.3 215 71.2
Peaxi162Scf00385g01230 Petunia axillaris HOM05D007175 ORTHO05D009032 2.8e-82 310.1 246 63.4
Hma1.2p1_0810F.1_g221930 Hydrangea macrophylla HOM05D007175 ORTHO05D009032 6.2e-82 308.9 198 72.7
LjContig00564g0013673 Lotus japonicus HOM05D007175 ORTHO05D009032 3.3e-75 286.6 246 59.8
PRCOL_00006786 Prasinoderma coloniale HOM05D007175 ORTHO05D009032 2.0e-59 234.2 373 37.3
CSS0005025 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 1.4e-57 228.0 130 82.3
CSS0026468 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 1.4e-57 228.0 130 82.3
Peaxi162Scf00385g01229 Petunia axillaris HOM05D007175 ORTHO05D009032 2.6e-51 207.2 157 61.1
MCO15G710 Micromonas commoda HOM05D007175 ORTHO05D009032 1.8e-44 184.5 385 33.0
Lsat_1_v5_gn_8_80261 Lactuca sativa HOM05D007175 ORTHO05D009032 2.2e-39 167.5 161 54.0
Sopen04g036620 Solanum pennellii HOM05D007175 ORTHO05D009032 2.1e-37 161.0 130 59.2
CSS0020086 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 3.0e-36 157.1 172 52.3
CSS0028611 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 3.0e-36 157.1 172 52.3
Dinv30324 Davidia involucrata HOM05D007175 ORTHO05D009032 8.5e-31 139.0 86 75.6
Dinv30323 Davidia involucrata HOM05D000225 ORTHO05D001817 3.0e-28 130.6 96 64.6
PGSC0003DMG400025665 Solanum tuberosum HOM05D007175 ORTHO05D009032 1.9e-22 111.3 77 66.2
SEGI_21773 Sequoiadendron giganteum HOM05D007175 ORTHO05D009032 1.6e-21 108.2 63 71.4
AagrBONN_evm.TU.Sc2ySwM_117.1015 Anthoceros agrestis HOM05D019562 ORTHO05D021280 1.9e-14 84.7 242 26.0
CBR_g24078 Chara braunii HOM05D019562 ORTHO05D021280 5.6e-14 83.2 204 27.5
Cre07.g321350 Chlamydomonas reinhardtii HOM05D019562 ORTHO05D021280 9.5e-14 82.4 556 19.6
Pp3c27_7660 Physcomitrium patens HOM05D019562 ORTHO05D021280 8.0e-13 79.3 216 26.4
Mapoly0091s0011 Marchantia polymorpha HOM05D019562 ORTHO05D021280 2.2e-10 71.2 75 42.7
Mapoly0022s0145 Marchantia polymorpha HOM05D019562 ORTHO05D021280 1.5e-06 58.5 77 37.7


User provided reference genes

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