Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc36.79 Carica papaya HOM05D006598 ORTHO05D008132 6.6e-193 677.2 334 100.0
Dinv39426 Davidia involucrata HOM05D006598 ORTHO05D008132 9.0e-150 533.9 337 77.7
Dinv36084 Davidia involucrata HOM05D006598 ORTHO05D008132 1.5e-149 533.1 336 76.5
Potri.002G260300 Populus trichocarpa HOM05D006598 ORTHO05D008132 2.0e-149 532.7 333 78.7
Atru.chr13.478 Acer truncatum HOM05D006598 ORTHO05D008132 2.6e-149 532.3 337 76.9
Cfa018154 Carpinus fangiana HOM05D006598 ORTHO05D008132 7.1e-147 524.2 333 76.6
QL02p008626 Quercus lobata HOM05D006598 ORTHO05D008132 1.2e-146 523.5 335 75.5
Sabra02G0198100 Salix brachista HOM05D006598 ORTHO05D008132 1.2e-146 523.5 333 78.1
CiPaw.15G078300 Carya illinoinensis HOM05D006598 ORTHO05D008132 3.5e-146 521.9 335 75.2
Duzib116G0116 Durio zibethinus HOM05D006598 ORTHO05D008132 7.9e-146 520.8 331 77.0
GSVIVG01009711001 Vitis vinifera HOM05D006598 ORTHO05D008132 7.9e-146 520.8 331 76.4
Prupe.1G379200 Prunus persica HOM05D006598 ORTHO05D008132 1.8e-145 519.6 336 75.0
CSS0023084 Camellia sinensis var. sinensis HOM05D006598 ORTHO05D008132 3.0e-145 518.8 337 75.1
Haze_17965 Corylus avellana HOM05D006598 ORTHO05D008132 1.5e-144 516.5 334 76.0
Phvul.009G057800 Phaseolus vulgaris HOM05D006598 ORTHO05D008132 3.3e-144 515.4 335 73.7
Glyma.04G032000 Glycine max HOM05D006598 ORTHO05D008132 4.3e-144 515.0 336 74.7
Ciclev10001322m.g Citrus clementina HOM05D006598 ORTHO05D008132 1.3e-143 513.5 333 74.8
VMungo1309G1899 Vigna mungo HOM05D006598 ORTHO05D008132 6.2e-143 511.1 335 72.8
Glyma.06G032100 Glycine max HOM05D006598 ORTHO05D008132 1.4e-142 510.0 336 74.7
COL.COLO4_26313 Corchorus olitorius HOM05D006598 ORTHO05D008132 1.2e-141 506.9 329 76.0
Medtr3g111840 Medicago truncatula HOM05D006598 ORTHO05D008132 1.2e-141 506.9 333 73.3
Manes.18G026900 Manihot esculenta HOM05D006598 ORTHO05D008132 2.6e-141 505.8 334 73.4
FvH4_2g39790 Fragaria vesca HOM05D006598 ORTHO05D008132 4.5e-141 505.0 337 72.1
Actinidia38007 Actinidia chinensis HOM05D006598 ORTHO05D008132 1.3e-140 503.4 332 74.1
FAN15G1256 Fragaria x ananassa HOM05D006598 ORTHO05D008132 2.2e-140 502.7 337 71.8
arahy.Tifrunner.gnm1.ann1.KF7WGB Arachis hypogaea HOM05D006598 ORTHO05D008132 3.8e-140 501.9 326 73.9
Actinidia15332 Actinidia chinensis HOM05D006598 ORTHO05D008132 4.9e-140 501.5 337 72.7
FAN27G1472 Fragaria x ananassa HOM05D006598 ORTHO05D008132 4.9e-140 501.5 337 71.5
Ca_15516_v3 Cicer arietinum L. HOM05D006598 ORTHO05D008132 6.5e-140 501.1 328 73.2
TAR625G1490 Trochodendron aralioides HOM05D006598 ORTHO05D008132 6.5e-140 501.1 335 74.3
arahy.Tifrunner.gnm1.ann1.9Y7K4V Arachis hypogaea HOM05D006598 ORTHO05D008132 1.4e-139 500.0 326 73.6
FAN20G2142 Fragaria x ananassa HOM05D006598 ORTHO05D008132 1.2e-138 496.9 335 71.0
TWI36G0987 Tripterygium wilfordii HOM05D006598 ORTHO05D008132 7.9e-138 494.2 338 74.0
vmacro21641 Vaccinium macrocarpon HOM05D006598 ORTHO05D008132 1.0e-137 493.8 332 71.7
Psat5g017160 Pisum sativum HOM05D006598 ORTHO05D008132 1.3e-137 493.4 334 71.6
CSS0013932 Camellia sinensis var. sinensis HOM05D006598 ORTHO05D008132 1.8e-137 493.0 326 74.2
THA.LOC104806941 Tarenaya hassleriana HOM05D006598 ORTHO05D008132 6.7e-137 491.1 325 73.8
TPR.G12344 Trifolium pratense HOM05D006598 ORTHO05D008132 6.7e-137 491.1 333 70.6
CANSAT25G2965 Cannabis sativa HOM05D006598 ORTHO05D008132 1.1e-136 490.3 335 71.0
Sed0027447 Sechium edule HOM05D006598 ORTHO05D008132 1.1e-136 490.3 323 72.4
Rhsim06G0033600 Rhododendron simsii HOM05D006598 ORTHO05D008132 8.2e-135 484.2 331 70.1
Lj4A39T66 Lonicera japonica HOM05D006598 ORTHO05D008132 5.3e-134 481.5 337 70.0
MBI16_g31005_MAGBIO Magnolia biondii HOM05D006598 ORTHO05D008132 5.3e-134 481.5 322 72.0
Lj1g0003551 Lotus japonicus HOM05D006598 ORTHO05D008132 1.2e-133 480.3 319 73.7
vmacro04528 Vaccinium macrocarpon HOM05D006598 ORTHO05D008132 1.5e-133 479.9 319 73.4
Eucgr.F01894 Eucalyptus grandis HOM05D006598 ORTHO05D008132 7.6e-133 477.6 332 70.5
PSO541G3348 Papaver somniferum HOM05D006598 ORTHO05D008132 7.6e-133 477.6 335 69.6
Aqoxy6G01111 Aquilegia oxysepala HOM05D006598 ORTHO05D008132 1.7e-132 476.5 337 70.0
Thhalv10003240m.g Eutrema salsugineum HOM05D006598 ORTHO05D008132 3.8e-132 475.3 318 72.0
PSO675G7094 Papaver somniferum HOM05D006598 ORTHO05D008132 6.5e-132 474.6 331 70.1
MSTRG.25174 Avicennia marina HOM05D006598 ORTHO05D008132 1.9e-131 473.0 333 69.4
PGR031G2630 Punica granatum HOM05D006598 ORTHO05D008132 1.9e-131 473.0 331 70.4
AL8G18360 Arabidopsis lyrata HOM05D006598 ORTHO05D008132 5.5e-131 471.5 316 71.5
Cc10_g02850 Coffea canephora HOM05D006598 ORTHO05D008132 5.5e-131 471.5 336 68.5
Aa31LG9G12810 Aethionema arabicum HOM05D006598 ORTHO05D008132 9.3e-131 470.7 319 71.5
Rhsim07G0239600 Rhododendron simsii HOM05D006598 ORTHO05D008132 9.3e-131 470.7 320 71.2
CARHR181720 Cardamine hirsuta HOM05D006598 ORTHO05D008132 3.5e-130 468.8 313 71.6
BcaC02g10811 Brassica carinata HOM05D006598 ORTHO05D008132 4.6e-130 468.4 313 72.2
A06p48250 Brassica napus HOM05D006598 ORTHO05D008132 4.6e-130 468.4 313 72.2
C04p24910 Brassica napus HOM05D006598 ORTHO05D008132 4.6e-130 468.4 313 72.2
BolC4t23991H Brassica oleracea HOM05D006598 ORTHO05D008132 4.6e-130 468.4 313 72.2
BraA06t27693Z Brassica rapa HOM05D006598 ORTHO05D008132 4.6e-130 468.4 313 72.2
Carub.0008s0618 Capsella rubella HOM05D006598 ORTHO05D008132 4.6e-130 468.4 317 71.6
Thecc.08G027000 Theobroma cacao HOM05D006598 ORTHO05D008132 1.0e-129 467.2 331 72.5
Sc02g0006160 Simmondsia chinensis HOM05D006598 ORTHO05D008132 1.3e-129 466.8 327 69.4
Migut.C00732 Erythranthe guttata HOM05D006598 ORTHO05D008132 5.1e-129 464.9 334 67.4
BcaC06g31749 Brassica carinata HOM05D006598 ORTHO05D008132 8.7e-129 464.2 313 71.6
Sp2g07390 Schrenkiella parvula HOM05D006598 ORTHO05D008132 3.3e-128 462.2 317 70.7
Lalb_Chr11g0062331 Lupinus albus HOM05D006598 ORTHO05D008132 5.7e-128 461.5 333 69.7
Lsat_1_v5_gn_4_119301 Lactuca sativa HOM05D006598 ORTHO05D008132 1.3e-127 460.3 328 68.9
SalBow7G0748 Salvia bowleyana HOM05D006598 ORTHO05D008132 1.3e-127 460.3 325 68.6
ECA232G3558 Erigeron canadensis HOM05D006598 ORTHO05D008132 2.2e-127 459.5 332 68.1
Nitab4.5_0010510g0030 Nicotiana tabacum HOM05D006598 ORTHO05D008132 2.8e-127 459.1 333 69.4
CAN.G1226.16 Capsicum annuum HOM05D006598 ORTHO05D008132 6.3e-127 458.0 331 68.9
PGSC0003DMG400003679 Solanum tuberosum HOM05D006598 ORTHO05D008132 8.2e-127 457.6 331 68.9
Nitab4.5_0006280g0060 Nicotiana tabacum HOM05D006598 ORTHO05D008132 2.4e-126 456.1 333 69.4
TAR628G1208 Trochodendron aralioides HOM05D006598 ORTHO05D008132 2.6e-125 452.6 307 72.6
AT5G42760 Arabidopsis thaliana HOM05D006598 ORTHO05D008132 7.7e-125 451.1 306 70.6
Solyc04g080380.3 Solanum lycopersicum HOM05D006598 ORTHO05D008132 2.9e-124 449.1 331 68.0
Sopen04g033970 Solanum pennellii HOM05D006598 ORTHO05D008132 2.9e-124 449.1 331 68.3
CDE04G2166 Ceratophyllum demersum HOM05D006598 ORTHO05D008132 4.6e-122 441.8 324 67.0
Hund26575 Selenicereus undatus HOM05D006598 ORTHO05D008132 5.7e-120 434.9 330 64.2
HPP92_018806 Vanilla planifolia HOM05D006598 ORTHO05D008132 4.1e-118 428.7 331 63.7
SGA_v2.0_scaffold54G19518 Striga asiatica HOM05D006598 ORTHO05D008132 3.8e-116 422.2 334 62.6
ATR0810G155 Amborella trichopoda HOM05D006598 ORTHO05D008132 2.5e-115 419.5 324 61.4
AUR62035446 Chenopodium quinoa HOM05D006598 ORTHO05D008132 4.2e-115 418.7 320 65.3
Ah.11g043150 Amaranthus hybridus HOM05D006598 ORTHO05D008132 1.4e-113 413.7 323 63.8
Oeu049953.1 Olea europaea HOM05D006598 ORTHO05D008132 1.0e-108 397.5 333 60.7
Nitab4.5_0005730g0030 Nicotiana tabacum HOM05D006598 ORTHO05D008132 6.1e-106 388.3 323 62.5
CDE06G0448 Ceratophyllum demersum HOM05D006598 ORTHO05D008132 2.2e-100 369.8 282 66.0
Os03g0775000 Oryza sativa ssp. japonica HOM05D006598 ORTHO05D008132 4.0e-97 359.0 307 59.0
SEGI_39292 Sequoiadendron giganteum HOM05D006598 ORTHO05D008132 4.0e-97 359.0 318 57.9
Zm00001eb059150 Zea mays HOM05D006598 ORTHO05D008132 2.2e-95 353.2 313 56.2
AagrBONN_evm.TU.Sc2ySwM_228.3129 Anthoceros agrestis HOM05D006598 ORTHO05D008132 3.5e-85 319.3 326 48.8
TAR381G1379 Trochodendron aralioides HOM05D006598 ORTHO05D008132 1.3e-84 317.4 209 74.2
Pp3c4_6590 Physcomitrium patens HOM05D006598 ORTHO05D008132 4.3e-83 312.4 303 53.1
Pp3c8_2950 Physcomitrium patens HOM05D006598 ORTHO05D008132 6.1e-82 308.5 309 52.4
HPP92_018704 Vanilla planifolia HOM05D006598 ORTHO05D008132 1.2e-80 304.3 253 61.3
Nitab4.5_0001091g0120 Nicotiana tabacum HOM05D006598 ORTHO05D008132 3.5e-77 292.7 200 71.0
Nn5g29606 Nelumbo nucifera HOM05D006598 ORTHO05D008132 2.3e-73 280.0 215 66.5
CSS0023478 Camellia sinensis var. sinensis HOM05D006598 ORTHO05D008132 1.3e-68 264.2 163 78.5
HanXRQChr16g0508491 Helianthus annuus HOM05D006598 ORTHO05D008132 1.2e-66 257.7 199 62.8
unitig_46.g17936 Utricularia gibba HOM05D006598 ORTHO05D008132 3.5e-61 239.6 178 65.2
FAN20G3016 Fragaria x ananassa HOM05D006598 ORTHO05D008132 1.1e-59 234.6 134 81.3
HPP92_018786 Vanilla planifolia HOM05D006598 ORTHO05D008132 3.6e-58 229.6 165 66.7
Pp3c12_23400 Physcomitrium patens HOM05D006598 ORTHO05D008132 6.4e-55 218.8 282 45.0
AUR62039547 Chenopodium quinoa HOM05D006598 ORTHO05D008132 2.4e-54 216.9 256 50.4
Actinidia29823 Actinidia chinensis HOM05D006598 ORTHO05D008132 1.2e-50 204.5 156 65.4
HPP92_018785 Vanilla planifolia HOM05D006598 ORTHO05D008132 4.2e-46 189.5 156 61.5
TAR381G0844 Trochodendron aralioides HOM05D006598 ORTHO05D008132 1.2e-45 188.0 134 69.4
Actinidia22543 Actinidia chinensis HOM05D006598 ORTHO05D008132 1.2e-40 171.4 144 61.8
MD15G1027400 Malus domestica HOM05D006598 ORTHO05D008132 6.4e-39 165.6 92 82.6
CSS0032599 Camellia sinensis var. sinensis HOM05D006598 ORTHO05D008132 2.4e-25 120.6 126 53.2
Actinidia29824 Actinidia chinensis HOM05D006598 ORTHO05D008132 4.0e-25 119.8 107 54.2
Nitab4.5_0000457g0120 Nicotiana tabacum HOM05D006598 ORTHO05D008132 1.3e-20 104.8 72 69.4
MCO09G151 Micromonas commoda HOM05D006598 ORTHO05D008132 4.8e-18 96.3 241 34.4
HanXRQChr09g0268921 Helianthus annuus HOM05D006598 ORTHO05D008132 7.2e-14 82.4 70 60.0
CBR_g22328 Chara braunii HOM05D006598 ORTHO05D008132 5.1e-12 76.3 117 38.5
Cre17.g737650 Chlamydomonas reinhardtii HOM05D038115 ORTHO05D008132 3.7e-10 70.1 176 31.2
MCO05G745 Micromonas commoda HOM05D006598 ORTHO05D269324 2.5e-06 57.4 173 31.8
Cre16.g655900 Chlamydomonas reinhardtii HOM05D006598 ORTHO05D008132 3.2e-06 57.0 214 27.6


User provided reference genes

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