Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc36.52 Carica papaya HOM05D005355 ORTHO05D006591 5.8e-110 401.0 212 100.0
Thecc.08G123400 Theobroma cacao HOM05D005355 ORTHO05D006591 1.1e-39 167.5 206 47.6
COL.COLO4_35946 Corchorus olitorius HOM05D005355 ORTHO05D006591 1.5e-36 157.1 195 48.7
Manes.18G076200 Manihot esculenta HOM05D005355 ORTHO05D006591 1.9e-36 156.8 193 49.7
Prupe.1G500200 Prunus persica HOM05D005355 ORTHO05D006591 3.3e-33 146.0 172 51.7
Sabra02G0066400 Salix brachista HOM05D005355 ORTHO05D006591 6.3e-32 141.7 199 45.2
GSVIVG01008886001 Vitis vinifera HOM05D005355 ORTHO05D006591 1.8e-31 140.2 192 45.8
Aa31LG9G14260 Aethionema arabicum HOM05D005355 ORTHO05D006591 4.1e-31 139.0 197 45.2
CSS0006134 Camellia sinensis var. sinensis HOM05D005355 ORTHO05D006591 4.1e-31 139.0 205 44.9
CSS0023513 Camellia sinensis var. sinensis HOM05D005355 ORTHO05D006591 4.1e-31 139.0 205 44.9
THA.LOC104817273 Tarenaya hassleriana HOM05D005355 ORTHO05D006591 4.1e-31 139.0 207 43.0
Gohir.A06G043600 Gossypium hirsutum HOM05D005355 ORTHO05D006591 1.2e-30 137.5 205 41.0
Glyma.04G250500 Glycine max HOM05D005355 ORTHO05D006591 2.0e-30 136.7 183 47.0
Gohir.A05G234400 Gossypium hirsutum HOM05D005355 ORTHO05D006591 2.0e-30 136.7 205 42.9
Gohir.D06G044400 Gossypium hirsutum HOM05D005355 ORTHO05D006591 2.0e-30 136.7 205 40.5
Potri.002G085000 Populus trichocarpa HOM05D005355 ORTHO05D006591 3.5e-30 136.0 172 47.1
Gorai.010G049600 Gossypium raimondii HOM05D005355 ORTHO05D006591 4.5e-30 135.6 205 40.5
Gohir.D05G236700 Gossypium hirsutum HOM05D005355 ORTHO05D006591 7.7e-30 134.8 205 42.4
Gorai.009G245100 Gossypium raimondii HOM05D005355 ORTHO05D006591 7.7e-30 134.8 205 42.4
MD00G1157400 Malus domestica HOM05D005355 ORTHO05D006591 1.3e-29 134.0 172 50.6
Atru.chr13.1434 Acer truncatum HOM05D005355 ORTHO05D006591 2.9e-29 132.9 178 44.4
MD15G1351600 Malus domestica HOM05D005355 ORTHO05D006591 6.5e-29 131.7 174 48.9
QL09p035410 Quercus lobata HOM05D005355 ORTHO05D006591 3.2e-28 129.4 172 46.5
Glyma.06G112300 Glycine max HOM05D005355 ORTHO05D006591 4.2e-28 129.0 171 46.8
Eucgr.F04357 Eucalyptus grandis HOM05D005355 ORTHO05D006591 5.5e-28 128.6 173 43.4
ClCG08G005570 Citrullus lanatus HOM05D005355 ORTHO05D006591 1.2e-27 127.5 177 46.9
Lalb_Chr08g0241491 Lupinus albus HOM05D005355 ORTHO05D006591 2.7e-27 126.3 171 45.6
PGR044G2411 Punica granatum HOM05D005355 ORTHO05D006591 2.7e-27 126.3 184 42.4
Lj1g0013612 Lotus japonicus HOM05D005355 ORTHO05D006591 3.6e-27 125.9 173 42.8
arahy.Tifrunner.gnm1.ann1.SCI4MN Arachis hypogaea HOM05D005355 ORTHO05D006591 6.1e-27 125.2 173 46.2
CiPaw.05G223300 Carya illinoinensis HOM05D005355 ORTHO05D006591 6.1e-27 125.2 172 45.9
arahy.Tifrunner.gnm1.ann1.Y2U2DK Arachis hypogaea HOM05D005355 ORTHO05D006591 8.0e-27 124.8 194 43.8
Phvul.009G124200 Phaseolus vulgaris HOM05D005355 ORTHO05D006591 1.0e-26 124.4 175 44.6
TAR625G0673 Trochodendron aralioides HOM05D005355 ORTHO05D006591 1.4e-26 124.0 185 43.8
TWI56G0611 Tripterygium wilfordii HOM05D005355 ORTHO05D006591 1.8e-26 123.6 172 45.3
CsaV3_2G014020 Cucumis sativus L. HOM05D005355 ORTHO05D006591 2.3e-26 123.2 212 41.5
Duzib093G2154 Durio zibethinus HOM05D005355 ORTHO05D006591 2.3e-26 123.2 206 40.8
TWI12G0790 Tripterygium wilfordii HOM05D005355 ORTHO05D006591 6.8e-26 121.7 171 44.4
Carub.0006s2687 Capsella rubella HOM05D005355 ORTHO05D006591 8.8e-26 121.3 201 39.8
RhsimUnG0093800 Rhododendron simsii HOM05D005355 ORTHO05D006591 8.8e-26 121.3 203 44.8
Potri.005G176400 Populus trichocarpa HOM05D005355 ORTHO05D006591 1.5e-25 120.6 163 44.2
VMungo1309G2754 Vigna mungo HOM05D005355 ORTHO05D006591 2.0e-25 120.2 155 48.4
Sabra05G0133000 Salix brachista HOM05D005355 ORTHO05D006591 2.6e-25 119.8 182 42.3
AT4G08310 Arabidopsis thaliana HOM05D005355 ORTHO05D006591 1.3e-24 117.5 199 41.7
Dinv27329 Davidia involucrata HOM05D005355 ORTHO05D006591 2.8e-24 116.3 179 45.3
CiPaw.06G029200 Carya illinoinensis HOM05D005355 ORTHO05D006591 3.7e-24 115.9 190 42.1
Lj4A622G14 Lonicera japonica HOM05D005355 ORTHO05D006591 8.3e-24 114.8 171 44.4
Nn5g28219 Nelumbo nucifera HOM05D005355 ORTHO05D006591 8.3e-24 114.8 183 41.5
FAN20G1264 Fragaria x ananassa HOM05D005355 ORTHO05D006591 1.4e-23 114.0 165 44.2
FvH4_2g26711 Fragaria vesca HOM05D005355 ORTHO05D006591 2.4e-23 113.2 165 44.8
FAN24G2565 Fragaria x ananassa HOM05D005355 ORTHO05D006591 2.4e-23 113.2 165 44.8
CARHR259390 Cardamine hirsuta HOM05D005355 ORTHO05D006591 3.1e-23 112.8 177 42.4
Thhalv10029139m.g Eutrema salsugineum HOM05D005355 ORTHO05D006591 4.1e-23 112.5 203 41.4
CANSAT25G1794 Cannabis sativa HOM05D005355 ORTHO05D006591 7.0e-23 111.7 180 40.6
Sp6g09690 Schrenkiella parvula HOM05D005355 ORTHO05D006591 1.2e-22 110.9 184 41.8
FAN27G0453 Fragaria x ananassa HOM05D005355 ORTHO05D006591 2.0e-22 110.2 165 44.2
Duzib116G0422 Durio zibethinus HOM05D005355 ORTHO05D006591 7.7e-22 108.2 206 35.4
Ca_15194_v3 Cicer arietinum L. HOM05D005355 ORTHO05D006591 1.7e-21 107.1 172 41.3
Cfa016002 Carpinus fangiana HOM05D005355 ORTHO05D006591 2.9e-21 106.3 163 42.9
AL6G42080 Arabidopsis lyrata HOM05D005355 ORTHO05D006591 1.5e-20 104.0 202 36.1
Ciclev10000938m.g Citrus clementina HOM05D005355 ORTHO05D006591 4.2e-20 102.4 171 38.0
Hund27026 Selenicereus undatus HOM05D005355 ORTHO05D006591 9.4e-20 101.3 171 39.8
Sc01g0001210 Simmondsia chinensis HOM05D005355 ORTHO05D006591 9.4e-20 101.3 173 36.4
TPR.G24014 Trifolium pratense HOM05D005355 ORTHO05D006591 1.2e-19 100.9 171 39.2
MELO3C010600.2 Cucumis melo HOM05D005355 ORTHO05D006591 1.6e-19 100.5 150 44.7
AUR62019052 Chenopodium quinoa HOM05D005355 ORTHO05D006591 2.7e-19 99.8 176 39.2
PSO528G0270 Papaver somniferum HOM05D005355 ORTHO05D006591 4.7e-19 99.0 193 33.7
MBI06_g20714_MAGBIO Magnolia biondii HOM05D005355 ORTHO05D006591 6.8e-18 95.1 165 37.6
Medtr3g072480 Medicago truncatula HOM05D005355 ORTHO05D006591 6.8e-18 95.1 175 38.9
PSO170G1761 Papaver somniferum HOM05D005355 ORTHO05D006591 6.8e-18 95.1 193 33.2
Psat5g132440 Pisum sativum HOM05D005355 ORTHO05D006591 8.8e-18 94.7 179 36.3
MSTRG.326 Avicennia marina HOM05D005355 ORTHO05D006591 2.0e-17 93.6 177 37.3
vmacro00824 Vaccinium macrocarpon HOM05D005355 ORTHO05D006591 2.0e-17 93.6 293 29.4
CAN.G127.21 Capsicum annuum HOM05D005355 ORTHO05D006591 1.7e-16 90.5 173 35.8
Thhalv10011453m.g Eutrema salsugineum HOM05D005355 ORTHO05D006591 1.7e-16 90.5 190 35.3
ECA238G0419 Erigeron canadensis HOM05D005355 ORTHO05D006591 2.2e-16 90.1 170 36.5
Sp1g33640 Schrenkiella parvula HOM05D005355 ORTHO05D006591 3.7e-16 89.4 172 37.2
Cc00_g04310 Coffea canephora HOM05D005355 ORTHO05D006591 4.9e-16 89.0 167 35.3
Aqoxy6G00187 Aquilegia oxysepala HOM05D005355 ORTHO05D006591 8.3e-16 88.2 161 33.5
Lsat_1_v5_gn_5_101461 Lactuca sativa HOM05D005355 ORTHO05D006591 1.4e-15 87.4 171 36.3
EL10Ac1g01045 Beta vulgaris HOM05D005355 ORTHO05D006591 5.4e-15 85.5 177 38.4
Solyc11g012920.3 Solanum lycopersicum HOM05D005355 ORTHO05D006591 9.2e-15 84.7 173 35.3
BraSC36t46079Z Brassica rapa HOM05D005355 ORTHO05D006591 1.2e-14 84.3 179 35.2
A10p07350 Brassica napus HOM05D005355 ORTHO05D006591 2.7e-14 83.2 179 35.2
Migut.F01876 Erythranthe guttata HOM05D005355 ORTHO05D006591 2.7e-14 83.2 178 35.4
Sopen11g007660 Solanum pennellii HOM05D005355 ORTHO05D006591 3.5e-14 82.8 173 34.7
AL1G52440 Arabidopsis lyrata HOM05D005355 ORTHO05D006591 4.5e-14 82.4 199 31.2
BcaB07g33934 Brassica carinata HOM05D005355 ORTHO05D006591 1.0e-13 81.3 200 32.0
unitig_52.g17510 Utricularia gibba HOM05D005355 ORTHO05D006467 1.0e-13 81.3 177 31.6
AT1G44780 Arabidopsis thaliana HOM05D005355 ORTHO05D006591 1.3e-13 80.9 170 33.5
BolC6t35219H Brassica oleracea HOM05D005355 ORTHO05D006591 1.9e-12 77.0 176 33.5
Oeu062052.1 Olea europaea HOM05D005355 ORTHO05D006591 1.9e-12 77.0 190 32.6
Zm00001eb113700 Zea mays HOM05D005355 ORTHO05D006591 2.5e-12 76.6 161 34.8
C06p00770 Brassica napus HOM05D005355 ORTHO05D006591 3.3e-12 76.3 172 33.7
RcHm_v2.0_Chr6g0295601 Rosa chinensis HOM05D005355 ORTHO05D006591 4.3e-12 75.9 83 50.6
Os11g0544600 Oryza sativa ssp. japonica HOM05D005355 ORTHO05D006591 5.6e-12 75.5 161 31.7
CARHR036040 Cardamine hirsuta HOM05D005355 ORTHO05D006591 9.5e-12 74.7 198 30.3
SGA_v2.0_scaffold122G33176 Striga asiatica HOM05D005355 ORTHO05D006591 2.8e-11 73.2 171 32.7
Nn8g40262 Nelumbo nucifera HOM05D005355 ORTHO05D006591 2.3e-10 70.1 72 48.6
arahy.Tifrunner.gnm1.ann1.V8LFJN Arachis hypogaea HOM05D005355 ORTHO05D006591 3.0e-10 69.7 171 32.2
AUR62027892 Chenopodium quinoa HOM05D005355 ORTHO05D006591 5.2e-10 68.9 148 37.2
BcaC08g42867 Brassica carinata HOM05D005355 ORTHO05D006591 6.8e-10 68.6 188 30.9
CDE06G1231 Ceratophyllum demersum HOM05D005355 ORTHO05D006591 1.2e-09 67.8 176 34.1
DCAR_011615 Daucus carota HOM05D005355 ORTHO05D006591 2.6e-09 66.6 63 50.8
ATR0104G007 Amborella trichopoda HOM05D005355 ORTHO05D006591 2.4e-07 60.1 171 30.4
Cpa.g.sc36.50 Carica papaya HOM05D005355 ORTHO05D006591 5.4e-07 58.9 186 28.0
HanXRQChr04g0109451 Helianthus annuus HOM05D005355 ORTHO05D006591 5.4e-07 58.9 73 42.5
MBI15_g20159_MAGBIO Magnolia biondii HOM05D005355 ORTHO05D006591 5.4e-07 58.9 125 31.2
MBI15_g24178_MAGBIO Magnolia biondii HOM05D005355 ORTHO05D006591 2.0e-06 57.0 125 30.4
FAN15G2971 Fragaria x ananassa HOM05D005355 ORTHO05D006591 3.5e-06 56.2 194 30.4


User provided reference genes

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