Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc36.50 Carica papaya HOM05D005355 ORTHO05D006591 1.5e-241 839.3 486 100.0
GSVIVG01008886001 Vitis vinifera HOM05D005355 ORTHO05D006591 1.7e-96 357.5 436 52.3
Ciclev10000938m.g Citrus clementina HOM05D005355 ORTHO05D006591 2.8e-91 340.1 434 51.4
CSS0023513 Camellia sinensis var. sinensis HOM05D005355 ORTHO05D006591 1.7e-88 330.9 450 48.9
Duzib093G2154 Durio zibethinus HOM05D005355 ORTHO05D006591 8.3e-88 328.6 443 47.6
MD15G1351600 Malus domestica HOM05D005355 ORTHO05D006591 2.1e-86 323.9 493 46.5
Potri.002G085000 Populus trichocarpa HOM05D005355 ORTHO05D006591 2.1e-86 323.9 447 49.4
CSS0006134 Camellia sinensis var. sinensis HOM05D005355 ORTHO05D006591 4.3e-84 316.2 450 47.6
Manes.18G076200 Manihot esculenta HOM05D005355 ORTHO05D006591 1.2e-83 314.7 438 48.6
Atru.chr13.1433 Acer truncatum HOM05D005355 ORTHO05D006591 3.6e-83 313.2 272 66.2
CiPaw.05G223300 Carya illinoinensis HOM05D005355 ORTHO05D006591 4.0e-82 309.7 446 46.6
CiPaw.06G029200 Carya illinoinensis HOM05D005355 ORTHO05D006591 6.8e-82 308.9 445 47.9
Thecc.08G123400 Theobroma cacao HOM05D005355 ORTHO05D006591 1.2e-81 308.1 469 46.3
Sabra02G0066400 Salix brachista HOM05D005355 ORTHO05D006591 8.4e-80 302.0 471 46.3
TWI12G0790 Tripterygium wilfordii HOM05D005355 ORTHO05D006591 2.7e-78 297.0 424 49.1
FAN27G0453 Fragaria x ananassa HOM05D005355 ORTHO05D006591 1.3e-77 294.7 429 47.6
Duzib116G0422 Durio zibethinus HOM05D005355 ORTHO05D006591 5.1e-77 292.7 464 44.6
CANSAT25G1794 Cannabis sativa HOM05D005355 ORTHO05D006591 1.9e-76 290.8 450 45.1
Prupe.1G500200 Prunus persica HOM05D005355 ORTHO05D006591 1.9e-76 290.8 440 45.9
VMungo1309G2754 Vigna mungo HOM05D005355 ORTHO05D006591 1.9e-76 290.8 432 46.3
PGR044G2411 Punica granatum HOM05D005355 ORTHO05D006591 1.6e-75 287.7 440 45.0
Hund27026 Selenicereus undatus HOM05D005355 ORTHO05D006591 4.0e-74 283.1 460 43.5
Sabra05G0133000 Salix brachista HOM05D005355 ORTHO05D006591 1.2e-73 281.6 419 49.9
Gorai.009G245100 Gossypium raimondii HOM05D005355 ORTHO05D006591 1.5e-73 281.2 447 44.1
MD00G1157400 Malus domestica HOM05D005355 ORTHO05D006591 1.5e-73 281.2 495 42.2
RcHm_v2.0_Chr6g0295601 Rosa chinensis HOM05D005355 ORTHO05D006591 2.0e-73 280.8 441 44.9
Medtr3g072480 Medicago truncatula HOM05D005355 ORTHO05D006591 2.6e-73 280.4 441 46.3
TWI56G0611 Tripterygium wilfordii HOM05D005355 ORTHO05D006591 3.4e-73 280.0 426 46.2
Gohir.A06G043600 Gossypium hirsutum HOM05D005355 ORTHO05D006591 2.9e-72 276.9 446 43.7
Gorai.010G049600 Gossypium raimondii HOM05D005355 ORTHO05D006591 2.9e-72 276.9 437 44.2
Phvul.009G124200 Phaseolus vulgaris HOM05D005355 ORTHO05D006591 6.4e-72 275.8 437 46.0
QL09p035410 Quercus lobata HOM05D005355 ORTHO05D006591 1.4e-71 274.6 449 46.1
Nn5g28219 Nelumbo nucifera HOM05D005355 ORTHO05D006591 4.2e-71 273.1 445 42.2
Glyma.06G112300 Glycine max HOM05D005355 ORTHO05D006591 5.4e-71 272.7 435 44.8
Glyma.04G250500 Glycine max HOM05D005355 ORTHO05D006591 7.1e-71 272.3 435 44.4
Eucgr.F04357 Eucalyptus grandis HOM05D005355 ORTHO05D006591 2.1e-70 270.8 430 44.0
Haze_00460 Corylus avellana HOM05D005355 ORTHO05D006591 4.6e-70 269.6 290 59.3
Thhalv10029139m.g Eutrema salsugineum HOM05D005355 ORTHO05D006591 1.1e-68 265.0 424 44.1
Dinv27329 Davidia involucrata HOM05D005355 ORTHO05D006591 1.5e-68 264.6 444 43.7
CAN.G127.21 Capsicum annuum HOM05D005355 ORTHO05D006591 2.5e-68 263.8 432 42.8
Gohir.D06G044400 Gossypium hirsutum HOM05D005355 ORTHO05D006591 9.6e-68 261.9 437 43.0
TAR625G0673 Trochodendron aralioides HOM05D005355 ORTHO05D006591 9.6e-68 261.9 419 45.1
EL10Ac1g01045 Beta vulgaris HOM05D005355 ORTHO05D006591 1.3e-67 261.5 423 43.0
Thhalv10011453m.g Eutrema salsugineum HOM05D005355 ORTHO05D006591 1.6e-67 261.2 417 45.1
arahy.Tifrunner.gnm1.ann1.SCI4MN Arachis hypogaea HOM05D005355 ORTHO05D006591 2.8e-67 260.4 449 43.9
PSO170G1761 Papaver somniferum HOM05D005355 ORTHO05D006591 4.8e-67 259.6 445 41.3
Potri.005G176400 Populus trichocarpa HOM05D005355 ORTHO05D006591 4.8e-67 259.6 488 42.4
FAN24G2565 Fragaria x ananassa HOM05D005355 ORTHO05D006591 6.2e-67 259.2 426 43.9
MSTRG.326 Avicennia marina HOM05D005355 ORTHO05D006591 1.8e-66 257.7 422 43.1
FAN20G1264 Fragaria x ananassa HOM05D005355 ORTHO05D006591 1.8e-66 257.7 426 43.4
TPR.G24014 Trifolium pratense HOM05D005355 ORTHO05D006591 1.8e-66 257.7 424 45.0
Gohir.A05G234400 Gossypium hirsutum HOM05D005355 ORTHO05D006591 2.4e-66 257.3 418 43.3
CsaV3_2G014020 Cucumis sativus L. HOM05D005355 ORTHO05D006591 4.0e-66 256.5 457 43.3
Ca_15194_v3 Cicer arietinum L. HOM05D005355 ORTHO05D006591 1.2e-65 255.0 443 43.8
PSO528G0270 Papaver somniferum HOM05D005355 ORTHO05D006591 2.0e-65 254.2 443 40.9
Gohir.D05G236700 Gossypium hirsutum HOM05D005355 ORTHO05D006591 2.6e-65 253.8 427 42.9
Cc00_g04310 Coffea canephora HOM05D005355 ORTHO05D006591 5.8e-65 252.7 412 41.3
AL1G52440 Arabidopsis lyrata HOM05D005355 ORTHO05D006591 7.6e-65 252.3 431 42.9
Lj1g0013612 Lotus japonicus HOM05D005355 ORTHO05D006591 9.9e-65 251.9 458 42.1
FAN15G2971 Fragaria x ananassa HOM05D005355 ORTHO05D006591 2.2e-64 250.8 450 41.8
arahy.Tifrunner.gnm1.ann1.Y2U2DK Arachis hypogaea HOM05D005355 ORTHO05D006591 6.4e-64 249.2 449 42.3
Psat5g132440 Pisum sativum HOM05D005355 ORTHO05D006591 1.4e-63 248.1 476 41.4
DCAR_011614 Daucus carota HOM05D005355 ORTHO05D006591 3.2e-63 246.9 317 50.8
Cfa016002 Carpinus fangiana HOM05D005355 ORTHO05D006591 1.2e-62 245.0 368 46.7
AT1G44780 Arabidopsis thaliana HOM05D005355 ORTHO05D006591 2.7e-62 243.8 403 44.2
MBI06_g20714_MAGBIO Magnolia biondii HOM05D005355 ORTHO05D006591 3.5e-62 243.4 433 41.1
Oeu062052.1 Olea europaea HOM05D005355 ORTHO05D006591 1.8e-61 241.1 436 39.9
Sopen11g007660 Solanum pennellii HOM05D005355 ORTHO05D006591 1.8e-61 241.1 430 40.2
ECA238G0419 Erigeron canadensis HOM05D005355 ORTHO05D006591 5.1e-61 239.6 413 41.2
Solyc11g012920.3 Solanum lycopersicum HOM05D005355 ORTHO05D006591 2.5e-60 237.3 430 40.0
Os11g0544600 Oryza sativa ssp. japonica HOM05D005355 ORTHO05D006591 5.6e-60 236.1 439 39.2
THA.LOC104817273 Tarenaya hassleriana HOM05D005355 ORTHO05D006591 9.6e-60 235.3 426 41.5
BcaB07g33934 Brassica carinata HOM05D005355 ORTHO05D006591 1.6e-59 234.6 426 40.8
Sp6g09690 Schrenkiella parvula HOM05D005355 ORTHO05D006591 1.6e-59 234.6 429 39.9
C06p00770 Brassica napus HOM05D005355 ORTHO05D006591 1.4e-58 231.5 408 41.7
Lalb_Chr08g0241491 Lupinus albus HOM05D005355 ORTHO05D006591 1.8e-58 231.1 453 41.3
BraSC36t46079Z Brassica rapa HOM05D005355 ORTHO05D006591 4.0e-58 229.9 434 41.5
CDE06G1640 Ceratophyllum demersum HOM05D005355 ORTHO05D006591 9.0e-58 228.8 411 44.5
HanXRQChr04g0109451 Helianthus annuus HOM05D005355 ORTHO05D006591 3.4e-57 226.9 407 39.8
AL6G42080 Arabidopsis lyrata HOM05D005355 ORTHO05D006591 5.8e-57 226.1 427 38.9
Nitab4.5_0001803g0130 Nicotiana tabacum HOM05D005355 ORTHO05D006591 5.8e-57 226.1 341 45.7
Sc01g0001210 Simmondsia chinensis HOM05D005355 ORTHO05D006591 5.8e-57 226.1 386 41.7
A10p07350 Brassica napus HOM05D005355 ORTHO05D006591 7.6e-57 225.7 434 41.0
Sp1g33640 Schrenkiella parvula HOM05D005355 ORTHO05D006591 7.6e-57 225.7 417 41.5
ClCG08G005570 Citrullus lanatus HOM05D005355 ORTHO05D006591 1.3e-56 224.9 421 42.0
Migut.F01876 Erythranthe guttata HOM05D005355 ORTHO05D006591 1.3e-56 224.9 442 39.1
MBI15_g20159_MAGBIO Magnolia biondii HOM05D005355 ORTHO05D006591 1.3e-56 224.9 376 44.4
Aqoxy6G00187 Aquilegia oxysepala HOM05D005355 ORTHO05D006591 3.8e-56 223.4 448 39.5
MELO3C010600.2 Cucumis melo HOM05D005355 ORTHO05D006591 6.4e-56 222.6 452 40.5
SGA_v2.0_scaffold122G33176 Striga asiatica HOM05D005355 ORTHO05D006591 1.9e-55 221.1 408 39.2
MBI15_g24178_MAGBIO Magnolia biondii HOM05D005355 ORTHO05D006591 1.2e-54 218.4 375 42.4
RhsimUnG0093800 Rhododendron simsii HOM05D005355 ORTHO05D006591 1.6e-54 218.0 414 41.1
ATR0104G007 Amborella trichopoda HOM05D005355 ORTHO05D006591 2.1e-54 217.6 450 38.4
Lsat_1_v5_gn_5_101461 Lactuca sativa HOM05D005355 ORTHO05D006591 2.7e-54 217.2 421 38.0
Zm00001eb113700 Zea mays HOM05D005355 ORTHO05D006591 2.7e-54 217.2 407 40.5
Aa31LG9G14260 Aethionema arabicum HOM05D005355 ORTHO05D006591 3.5e-54 216.9 421 39.7
BolC6t35219H Brassica oleracea HOM05D005355 ORTHO05D006591 1.1e-52 211.8 397 39.8
CARHR259390 Cardamine hirsuta HOM05D005355 ORTHO05D006591 1.5e-52 211.5 428 38.8
Lj4A622G14 Lonicera japonica HOM05D005355 ORTHO05D006591 2.5e-52 210.7 388 40.7
unitig_52.g17510 Utricularia gibba HOM05D005355 ORTHO05D006467 5.6e-52 209.5 475 34.5
CARHR036040 Cardamine hirsuta HOM05D005355 ORTHO05D006591 2.8e-51 207.2 403 37.0
AT4G08310 Arabidopsis thaliana HOM05D005355 ORTHO05D006591 6.2e-51 206.1 402 39.1
BcaC08g42867 Brassica carinata HOM05D005355 ORTHO05D006591 1.8e-50 204.5 413 38.7
Sed0010827 Sechium edule HOM05D005355 ORTHO05D006591 3.1e-50 203.8 324 46.0
vmacro00824 Vaccinium macrocarpon HOM05D005355 ORTHO05D006591 9.0e-50 202.2 433 40.9
FvH4_2g26711 Fragaria vesca HOM05D005355 ORTHO05D006591 1.5e-49 201.4 386 40.4
SHI29459 Sapria himalayana HOM05D005355 ORTHO05D006591 2.0e-49 201.1 454 37.2
Carub.0006s2687 Capsella rubella HOM05D005355 ORTHO05D006591 6.5e-48 196.1 424 37.0
AUR62019052 Chenopodium quinoa HOM05D005355 ORTHO05D006591 3.0e-45 187.2 388 37.1
MBI15_g20157_MAGBIO Magnolia biondii HOM05D005355 ORTHO05D010248 2.3e-37 161.0 271 42.8
CDE06G0823 Ceratophyllum demersum HOM05D005355 ORTHO05D006591 3.3e-36 157.1 139 62.6
SMO230G0121 Selaginella moellendorffii HOM05D005355 ORTHO05D006591 2.4e-34 151.0 377 33.4
COL.COLO4_35946 Corchorus olitorius HOM05D005355 ORTHO05D006591 1.5e-33 148.3 283 39.6
AagrBONN_evm.TU.Sc2ySwM_362.1810 Anthoceros agrestis HOM05D005355 ORTHO05D006591 2.5e-31 141.0 441 30.8
MBI15_g19197_MAGBIO Magnolia biondii HOM05D005355 ORTHO05D006591 1.0e-29 135.6 271 36.9
Carub.0001s3530 Capsella rubella HOM05D005355 ORTHO05D006591 8.8e-29 132.5 151 53.0
Peaxi162Scf00914g00033 Petunia axillaris HOM05D005355 ORTHO05D006591 1.4e-26 125.2 266 38.3
SMO367G1068 Selaginella moellendorffii HOM05D005355 ORTHO05D006591 1.8e-26 124.8 382 31.2
AUR62027892 Chenopodium quinoa HOM05D005355 ORTHO05D006591 7.2e-23 112.8 363 30.9
Pp3c21_16190 Physcomitrium patens HOM05D005355 ORTHO05D006591 8.0e-22 109.4 436 28.0
Mapoly0004s0202 Marchantia polymorpha HOM05D005355 ORTHO05D006591 3.9e-21 107.1 447 27.7
SMO230G0058 Selaginella moellendorffii HOM05D005355 ORTHO05D006591 7.4e-20 102.8 102 52.0
CBR_g29492 Chara braunii HOM05D005355 ORTHO05D006591 2.4e-18 97.8 114 45.6
arahy.Tifrunner.gnm1.ann1.V8LFJN Arachis hypogaea HOM05D005355 ORTHO05D006591 1.0e-16 92.4 303 34.0
CDE06G1231 Ceratophyllum demersum HOM05D005355 ORTHO05D006591 1.0e-16 92.4 262 34.0
SGA_v2.0_scaffold340G49302 Striga asiatica HOM05D005355 ORTHO05D006591 3.0e-13 80.9 131 44.3
Nitab4.5_0001273g0020 Nicotiana tabacum HOM05D005355 ORTHO05D006591 2.4e-10 71.2 198 34.8
SEGI_25872 Sequoiadendron giganteum HOM05D005355 ORTHO05D006591 5.0e-08 63.5 315 27.0
HPP92_011157 Vanilla planifolia HOM05D005355 ORTHO05D006591 1.1e-07 62.4 285 28.8
Cre12.g539750 Chlamydomonas reinhardtii HOM05D005355 ORTHO05D006591 5.5e-07 60.1 115 34.8


User provided reference genes

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