Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc36.38 Carica papaya HOM05D007591 ORTHO05D009564 1.0e-47 193.4 118 100.0
TAR622G1019 Trochodendron aralioides HOM05D007591 ORTHO05D009564 7.3e-30 134.0 125 71.2
PGR083G0752 Punica granatum HOM05D007591 ORTHO05D009564 4.7e-29 131.3 122 62.3
Duzib091G0002 Durio zibethinus HOM05D007591 ORTHO05D009564 1.4e-28 129.8 126 59.5
THA.LOC104817210 Tarenaya hassleriana HOM05D007591 ORTHO05D009564 1.4e-28 129.8 129 66.7
Nn3g18513 Nelumbo nucifera HOM05D007591 ORTHO05D009564 4.0e-28 128.3 123 65.0
Thecc.04G198100 Theobroma cacao HOM05D007591 ORTHO05D009564 4.0e-28 128.3 124 66.9
Gohir.A02G020402 Gossypium hirsutum HOM05D007591 ORTHO05D009564 5.2e-28 127.9 124 60.5
QL07p035218 Quercus lobata HOM05D007591 ORTHO05D009564 5.2e-28 127.9 123 65.0
Nitab4.5_0001180g0270 Nicotiana tabacum HOM05D007591 ORTHO05D009564 6.9e-28 127.5 120 62.5
Nitab4.5_0004612g0010 Nicotiana tabacum HOM05D007591 ORTHO05D009564 1.2e-27 126.7 119 62.2
MBI06_g28831_MAGBIO Magnolia biondii HOM05D007591 ORTHO05D009564 1.5e-27 126.3 119 61.3
Actinidia35144 Actinidia chinensis HOM05D007591 ORTHO05D009564 2.0e-27 125.9 127 59.1
Peaxi162Scf00171g00034 Petunia axillaris HOM05D007591 ORTHO05D009564 2.0e-27 125.9 126 64.3
Prupe.5G241900 Prunus persica HOM05D007591 ORTHO05D009564 2.0e-27 125.9 127 64.6
SpUn0008_0030 Schrenkiella parvula HOM05D007591 ORTHO05D009564 2.0e-27 125.9 118 61.9
Aa31LG6G9200 Aethionema arabicum HOM05D007591 ORTHO05D009564 2.6e-27 125.6 121 57.9
CiPaw.16G070000 Carya illinoinensis HOM05D007591 ORTHO05D009564 2.6e-27 125.6 127 67.7
Gohir.D02G024000 Gossypium hirsutum HOM05D007591 ORTHO05D009564 3.4e-27 125.2 125 58.4
Gorai.005G030000 Gossypium raimondii HOM05D007591 ORTHO05D009564 3.4e-27 125.2 125 58.4
Haze_18422 Corylus avellana HOM05D007591 ORTHO05D009564 4.4e-27 124.8 128 55.5
MSTRG.23207 Avicennia marina HOM05D007591 ORTHO05D009564 7.6e-27 124.0 119 56.3
CAN.G1909.5 Capsicum annuum HOM05D007591 ORTHO05D009564 9.9e-27 123.6 119 62.2
Psat0s3092g0040 Pisum sativum HOM05D007591 ORTHO05D009564 1.3e-26 123.2 119 65.5
PSO063G6315 Papaver somniferum HOM05D007591 ORTHO05D009564 1.7e-26 122.9 129 63.6
Atru.chr9.1591 Acer truncatum HOM05D007591 ORTHO05D009564 2.2e-26 122.5 127 64.6
Ca_25920_v3 Cicer arietinum L. HOM05D007591 ORTHO05D009564 2.2e-26 122.5 119 64.7
MD14G1244400 Malus domestica HOM05D007591 ORTHO05D009564 2.2e-26 122.5 126 73.0
TWI15G0768 Tripterygium wilfordii HOM05D007591 ORTHO05D009564 2.2e-26 122.5 118 70.3
Manes.02G219300 Manihot esculenta HOM05D007591 ORTHO05D009564 2.9e-26 122.1 119 72.3
COL.COLO4_20200 Corchorus olitorius HOM05D007591 ORTHO05D009564 4.9e-26 121.3 119 68.1
Sed0023620 Sechium edule HOM05D007591 ORTHO05D009564 6.4e-26 120.9 122 61.5
CARHR134910 Cardamine hirsuta HOM05D007591 ORTHO05D009564 1.1e-25 120.2 118 59.3
PGSC0003DMG400010159 Solanum tuberosum HOM05D007591 ORTHO05D009564 1.1e-25 120.2 124 55.6
DCAR_014000 Daucus carota HOM05D007591 ORTHO05D009564 1.4e-25 119.8 119 59.7
Thhalv10011878m.g Eutrema salsugineum HOM05D007591 ORTHO05D009564 1.4e-25 119.8 118 62.7
FAN04G1638 Fragaria x ananassa HOM05D007591 ORTHO05D009564 1.4e-25 119.8 118 61.0
Oeu001600.1 Olea europaea HOM05D007591 ORTHO05D009564 1.9e-25 119.4 119 58.0
Eucgr.H00568 Eucalyptus grandis HOM05D007591 ORTHO05D009564 2.4e-25 119.0 135 58.5
AL4G17330 Arabidopsis lyrata HOM05D007591 ORTHO05D009564 3.2e-25 118.6 118 60.2
arahy.Tifrunner.gnm1.ann1.T0CPW9 Arachis hypogaea HOM05D007591 ORTHO05D009564 3.2e-25 118.6 117 64.1
Glyma.08G057500 Glycine max HOM05D007591 ORTHO05D009564 3.2e-25 118.6 131 67.9
Solyc03g098410.1 Solanum lycopersicum HOM05D007591 ORTHO05D009564 3.2e-25 118.6 124 54.8
Sopen03g029150 Solanum pennellii HOM05D007591 ORTHO05D009564 3.2e-25 118.6 124 54.8
Carub.0001s3401 Capsella rubella HOM05D007591 ORTHO05D009564 5.4e-25 117.9 115 56.5
CsaV3_1G005150 Cucumis sativus L. HOM05D007591 ORTHO05D009564 5.4e-25 117.9 122 63.9
Potri.004G068400 Populus trichocarpa HOM05D007591 ORTHO05D009564 5.4e-25 117.9 128 53.1
FvH4_5g18200 Fragaria vesca HOM05D007591 ORTHO05D009564 7.1e-25 117.5 128 54.7
CSS0020209 Camellia sinensis var. sinensis HOM05D007591 ORTHO05D009564 1.2e-24 116.7 130 58.5
Ciclev10022902m.g Citrus clementina HOM05D007591 ORTHO05D009564 1.2e-24 116.7 121 71.1
Dinv01404 Davidia involucrata HOM05D007591 ORTHO05D009564 1.2e-24 116.7 124 54.0
HanXRQChr17g0560331 Helianthus annuus HOM05D007591 ORTHO05D009564 1.6e-24 116.3 125 54.4
SalBow5G5001 Salvia bowleyana HOM05D007591 ORTHO05D009564 1.6e-24 116.3 119 59.7
SHI12607 Sapria himalayana HOM05D007591 ORTHO05D009564 2.1e-24 115.9 119 55.5
Cc04_g08740 Coffea canephora HOM05D007591 ORTHO05D009564 2.7e-24 115.5 119 61.3
Migut.O00251 Erythranthe guttata HOM05D007591 ORTHO05D009564 2.7e-24 115.5 118 57.6
Medtr6g036570 Medicago truncatula HOM05D007591 ORTHO05D009564 2.7e-24 115.5 119 63.9
HPP92_005097 Vanilla planifolia HOM05D007591 ORTHO05D009564 3.5e-24 115.2 122 54.1
AT2G25720 Arabidopsis thaliana HOM05D007591 ORTHO05D009564 4.6e-24 114.8 118 57.6
Phvul.002G333300 Phaseolus vulgaris HOM05D007591 ORTHO05D009564 4.6e-24 114.8 131 65.6
Aqoxy3G04178 Aquilegia oxysepala HOM05D007591 ORTHO05D009564 6.0e-24 114.4 122 63.1
BcaB06g27212 Brassica carinata HOM05D007591 ORTHO05D009564 6.0e-24 114.4 118 57.6
Sabra04G0046100 Salix brachista HOM05D007591 ORTHO05D009564 6.0e-24 114.4 125 52.8
MELO3C001953.2 Cucumis melo HOM05D007591 ORTHO05D009564 7.8e-24 114.0 122 63.9
ClCG04G012550 Citrullus lanatus HOM05D007591 ORTHO05D009564 1.0e-23 113.6 120 64.2
Sc10g0009060 Simmondsia chinensis HOM05D007591 ORTHO05D009564 1.0e-23 113.6 117 59.0
FAN13G0294 Fragaria x ananassa HOM05D007591 ORTHO05D009564 3.0e-23 112.1 121 60.3
A04p11310 Brassica napus HOM05D007591 ORTHO05D009564 3.9e-23 111.7 123 56.9
BraA04t16792Z Brassica rapa HOM05D007591 ORTHO05D009564 3.9e-23 111.7 123 56.9
Rhsim12G0136500 Rhododendron simsii HOM05D007591 ORTHO05D009564 5.1e-23 111.3 126 66.7
ATR0807G077 Amborella trichopoda HOM05D007591 ORTHO05D009564 6.6e-23 110.9 124 57.3
arahy.Tifrunner.gnm1.ann1.B1XHC0 Arachis hypogaea HOM05D007591 ORTHO05D009564 6.6e-23 110.9 119 69.7
EL10Ac8g19512 Beta vulgaris HOM05D007591 ORTHO05D009564 6.6e-23 110.9 120 62.5
Lalb_Chr05g0221361 Lupinus albus HOM05D007591 ORTHO05D009564 6.6e-23 110.9 125 67.2
RcHm_v2.0_Chr7g0177391 Rosa chinensis HOM05D007591 ORTHO05D009564 6.6e-23 110.9 133 56.4
C04p45070 Brassica napus HOM05D007591 ORTHO05D009564 8.7e-23 110.5 121 59.5
BolC4t26085H Brassica oleracea HOM05D007591 ORTHO05D009564 8.7e-23 110.5 121 59.5
Hma1.2p1_1404F.1_g281340 Hydrangea macrophylla HOM05D007591 ORTHO05D009564 8.7e-23 110.5 127 68.5
FAN18G3921 Fragaria x ananassa HOM05D007591 ORTHO05D009564 1.1e-22 110.2 130 55.4
ECA234G2981 Erigeron canadensis HOM05D007591 ORTHO05D009564 1.5e-22 109.8 126 67.5
LjContig00484g0016765 Lotus japonicus HOM05D007591 ORTHO05D009564 2.5e-22 109.0 128 65.6
Lsat_1_v5_gn_4_52441 Lactuca sativa HOM05D007591 ORTHO05D009564 9.6e-22 107.1 130 64.6
Ah.09g232230 Amaranthus hybridus HOM05D007591 ORTHO05D009564 8.1e-21 104.0 125 54.4
Zm00001eb429080 Zea mays HOM05D007591 ORTHO05D009564 2.9e-18 95.5 139 44.6
CDE07G1474 Ceratophyllum demersum HOM05D007591 ORTHO05D009564 6.4e-18 94.4 104 51.9
unitig_22.g5435 Utricularia gibba HOM05D007591 ORTHO05D009564 1.9e-17 92.8 110 58.2
SEGI_35599 Sequoiadendron giganteum HOM05D007591 ORTHO05D009564 5.4e-17 91.3 120 47.5
AUR62033202 Chenopodium quinoa HOM05D007591 ORTHO05D009564 1.6e-16 89.7 120 47.5
AUR62008565 Chenopodium quinoa HOM05D007591 ORTHO05D009564 2.1e-16 89.4 120 47.5
SpUn0123_0020 Schrenkiella parvula HOM05D007591 ORTHO05D009564 3.0e-15 85.5 68 63.2
Pp3c23_22030 Physcomitrium patens HOM05D007591 ORTHO05D009564 7.4e-14 80.9 119 47.9
Atru.chr5.956 Acer truncatum HOM05D007591 ORTHO05D009564 1.4e-12 76.6 64 60.9
Medtr6g036573 Medicago truncatula HOM05D007591 ORTHO05D009564 9.0e-12 73.9 42 76.2
THA.LOC104813140 Tarenaya hassleriana HOM05D007591 ORTHO05D009564 9.0e-12 73.9 109 41.3
CAN.G1909.8 Capsicum annuum HOM05D007591 ORTHO05D009564 4.5e-11 71.6 56 62.5
Mapoly0020s0124 Marchantia polymorpha HOM05D007591 ORTHO05D009564 7.6e-11 70.9 133 37.6
Os04g0566000 Oryza sativa ssp. japonica HOM05D007591 ORTHO05D009564 2.4e-09 65.9 48 66.7


User provided reference genes

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