Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc36.24 Carica papaya HOM05D006768 ORTHO05D008436 4.6e-52 207.6 105 100.0
Thecc.08G120600 Theobroma cacao HOM05D006768 ORTHO05D008436 2.2e-46 188.7 105 89.5
Duzib041G0323 Durio zibethinus HOM05D006768 ORTHO05D008436 3.8e-46 188.0 105 90.5
Duzib116G0009 Durio zibethinus HOM05D006768 ORTHO05D008436 8.5e-46 186.8 105 85.7
Manes.18G074850 Manihot esculenta HOM05D006768 ORTHO05D008436 8.5e-46 186.8 103 86.4
Gohir.A05G233000 Gossypium hirsutum HOM05D006768 ORTHO05D008436 1.1e-45 186.4 105 88.6
COL.COLO4_38328 Corchorus olitorius HOM05D006768 ORTHO05D008436 3.2e-45 184.9 103 88.3
Manes.02G160800 Manihot esculenta HOM05D006768 ORTHO05D008436 3.2e-45 184.9 103 85.4
Gohir.D02G081200 Gossypium hirsutum HOM05D006768 ORTHO05D008436 4.2e-45 184.5 105 84.8
Gohir.D05G235400 Gossypium hirsutum HOM05D006768 ORTHO05D008436 1.6e-44 182.6 105 82.9
Hma1.2p1_0009F.1_g006320 Hydrangea macrophylla HOM05D006768 ORTHO05D008436 2.1e-44 182.2 106 86.8
Potri.005G174700 Populus trichocarpa HOM05D006768 ORTHO05D008436 3.6e-44 181.4 103 86.4
Potri.002G086600 Populus trichocarpa HOM05D006768 ORTHO05D008436 1.4e-43 179.5 103 85.4
Gohir.A02G074000 Gossypium hirsutum HOM05D006768 ORTHO05D008436 3.3e-42 174.9 105 86.7
Solyc11g013100.2 Solanum lycopersicum HOM05D006768 ORTHO05D008436 7.4e-42 173.7 104 82.7
Sopen11g008160 Solanum pennellii HOM05D006768 ORTHO05D008436 7.4e-42 173.7 104 82.7
MSTRG.25394 Avicennia marina HOM05D006768 ORTHO05D008436 1.7e-41 172.6 106 85.8
Nitab4.5_0010364g0020 Nicotiana tabacum HOM05D006768 ORTHO05D008436 1.7e-41 172.6 104 83.7
Gorai.005G090800 Gossypium raimondii HOM05D006768 ORTHO05D008436 2.2e-41 172.2 105 81.0
MELO3C011580.2 Cucumis melo HOM05D006768 ORTHO05D008436 1.4e-40 169.5 104 78.8
ClCG08G005390 Citrullus lanatus HOM05D006768 ORTHO05D008436 1.8e-40 169.1 104 78.8
CAN.G342.8 Capsicum annuum HOM05D006768 ORTHO05D008436 2.4e-40 168.7 103 81.6
Sed0001868 Sechium edule HOM05D006768 ORTHO05D008436 2.6e-39 165.2 104 77.9
TWI56G0584 Tripterygium wilfordii HOM05D006768 ORTHO05D008436 2.6e-39 165.2 103 80.6
Gorai.009G243700 Gossypium raimondii HOM05D006768 ORTHO05D008436 3.4e-39 164.9 98 79.6
Sabra02G0068000 Salix brachista HOM05D006768 ORTHO05D008436 3.4e-39 164.9 98 84.7
CAN.G2.37 Capsicum annuum HOM05D006768 ORTHO05D008436 4.5e-39 164.5 103 79.6
PGSC0003DMG400014092 Solanum tuberosum HOM05D006768 ORTHO05D008436 5.9e-39 164.1 103 79.6
SalBow7G0914 Salvia bowleyana HOM05D006768 ORTHO05D008436 1.3e-38 162.9 100 83.0
SalBow7G4665 Salvia bowleyana HOM05D006768 ORTHO05D008436 1.3e-38 162.9 100 83.0
Ciclev10002911m.g Citrus clementina HOM05D006768 ORTHO05D008436 2.9e-38 161.8 111 75.7
CSS0001196 Camellia sinensis var. sinensis HOM05D006768 ORTHO05D008436 5.0e-38 161.0 104 83.7
Aqoxy6G00156 Aquilegia oxysepala HOM05D006768 ORTHO05D008436 1.4e-37 159.5 106 77.4
Nitab4.5_0005357g0030 Nicotiana tabacum HOM05D006768 ORTHO05D008436 1.4e-37 159.5 98 81.6
PGR044G1209 Punica granatum HOM05D006768 ORTHO05D008436 1.9e-37 159.1 104 79.8
CsaV3_6G003570 Cucumis sativus L. HOM05D006768 ORTHO05D008436 4.2e-37 157.9 98 78.6
Lsat_1_v5_gn_4_25061 Lactuca sativa HOM05D006768 ORTHO05D008436 2.1e-36 155.6 105 81.0
CSS0006116 Camellia sinensis var. sinensis HOM05D006768 ORTHO05D008436 3.6e-36 154.8 104 76.9
FvH4_2g26460 Fragaria vesca HOM05D006768 ORTHO05D008436 4.7e-36 154.5 103 79.6
RcHm_v2.0_Chr6g0295131 Rosa chinensis HOM05D006768 ORTHO05D008436 4.7e-36 154.5 103 79.6
Migut.C01157 Erythranthe guttata HOM05D006768 ORTHO05D008436 7.9e-36 153.7 104 78.8
HanXRQChr08g0223691 Helianthus annuus HOM05D006768 ORTHO05D008436 7.9e-36 153.7 106 78.3
Cc10_g11060 Coffea canephora HOM05D006768 ORTHO05D008436 1.0e-35 153.3 97 78.4
CiPaw.06G026900 Carya illinoinensis HOM05D006768 ORTHO05D008436 1.4e-35 152.9 109 72.5
ECA234G1078 Erigeron canadensis HOM05D006768 ORTHO05D008436 1.8e-35 152.5 105 75.2
TAR625G0411 Trochodendron aralioides HOM05D006768 ORTHO05D008436 1.8e-35 152.5 106 77.4
EL10Ac1g00013 Beta vulgaris HOM05D006768 ORTHO05D008436 2.3e-35 152.1 111 71.2
FAN24G3387 Fragaria x ananassa HOM05D006768 ORTHO05D008436 2.3e-35 152.1 103 78.6
GSVIVG01008909001 Vitis vinifera HOM05D006768 ORTHO05D008436 3.0e-35 151.8 115 73.9
Dinv27347 Davidia involucrata HOM05D006768 ORTHO05D008436 3.9e-35 151.4 99 80.8
Sabra05G0131800 Salix brachista HOM05D006768 ORTHO05D008436 3.9e-35 151.4 87 86.2
unitig_21.g20584 Utricularia gibba HOM05D006768 ORTHO05D008436 1.5e-34 149.4 104 72.1
vmacro00812 Vaccinium macrocarpon HOM05D006768 ORTHO05D008436 2.6e-34 148.7 104 74.0
Hma1.2p1_0073F.1_g038410 Hydrangea macrophylla HOM05D006768 ORTHO05D008436 4.4e-34 147.9 103 77.7
Prupe.1G502600 Prunus persica HOM05D006768 ORTHO05D008436 7.4e-34 147.1 103 76.7
MBI06_g02573_MAGBIO Magnolia biondii HOM05D006768 ORTHO05D008436 9.7e-34 146.7 98 79.6
TAR376G1039 Trochodendron aralioides HOM05D000018 ORTHO05D001920 1.3e-33 146.4 96 80.2
ECA233G5727 Erigeron canadensis HOM05D006768 ORTHO05D008436 2.2e-33 145.6 105 76.2
FAN15G1404 Fragaria x ananassa HOM05D006768 ORTHO05D008436 4.8e-33 144.4 98 78.6
HanXRQChr16g0527071 Helianthus annuus HOM05D006768 ORTHO05D008436 8.2e-33 143.7 105 76.2
arahy.Tifrunner.gnm1.ann1.BFT67J Arachis hypogaea HOM05D006768 ORTHO05D008436 1.8e-32 142.5 111 68.5
arahy.Tifrunner.gnm1.ann1.V4QE5E Arachis hypogaea HOM05D006768 ORTHO05D008436 1.8e-32 142.5 111 68.5
RhsimUnG0095400 Rhododendron simsii HOM05D006768 ORTHO05D008436 5.3e-32 141.0 97 79.4
TWI12G0503 Tripterygium wilfordii HOM05D006768 ORTHO05D008436 5.3e-32 141.0 104 73.1
Atru.chr13.1393 Acer truncatum HOM05D006768 ORTHO05D008436 1.6e-31 139.4 104 69.2
AUR62004718 Chenopodium quinoa HOM05D006768 ORTHO05D008436 1.6e-31 139.4 109 70.6
MD08G1168400 Malus domestica HOM05D006768 ORTHO05D008436 5.9e-31 137.5 102 71.6
Psat2g079320 Pisum sativum HOM05D006768 ORTHO05D008436 5.9e-31 137.5 109 72.5
CANSAT25G0473 Cannabis sativa HOM05D006768 ORTHO05D008436 1.7e-30 136.0 113 68.1
Thhalv10029535m.g Eutrema salsugineum HOM05D006768 ORTHO05D008436 1.5e-29 132.9 109 66.1
Hund27041 Selenicereus undatus HOM05D006768 ORTHO05D008436 1.5e-29 132.9 112 66.1
SGA_v2.0_scaffold24G10479 Striga asiatica HOM05D006768 ORTHO05D008436 1.5e-29 132.9 105 63.8
Haze_00489 Corylus avellana HOM05D006768 ORTHO05D008436 4.2e-29 131.3 87 79.3
CDE04G1345 Ceratophyllum demersum HOM05D006768 ORTHO05D008436 5.5e-29 131.0 105 63.8
PSO170G4432 Papaver somniferum HOM05D006768 ORTHO05D008436 5.5e-29 131.0 104 71.2
PSO528G0064 Papaver somniferum HOM05D006768 ORTHO05D008436 5.5e-29 131.0 104 71.2
THA.LOC104817125 Tarenaya hassleriana HOM05D006768 ORTHO05D008436 5.5e-29 131.0 110 69.1
Lalb_Chr04g0253331 Lupinus albus HOM05D006768 ORTHO05D008436 7.2e-29 130.6 112 66.1
QL09p036660 Quercus lobata HOM05D006768 ORTHO05D008436 7.2e-29 130.6 108 65.7
Glyma.13G082200 Glycine max HOM05D006768 ORTHO05D008436 1.2e-28 129.8 110 69.1
Phvul.008G165800 Phaseolus vulgaris HOM05D006768 ORTHO05D008436 1.2e-28 129.8 113 66.4
TPR.G8510 Trifolium pratense HOM05D006768 ORTHO05D008436 2.7e-28 128.6 110 64.5
Glyma.14G163200 Glycine max HOM05D006768 ORTHO05D008436 4.7e-28 127.9 110 69.1
Eucgr.F04346 Eucalyptus grandis HOM05D006768 ORTHO05D008436 6.1e-28 127.5 89 76.4
Sc23g0000800 Simmondsia chinensis HOM05D006768 ORTHO05D008436 6.1e-28 127.5 91 78.0
BcaC01g04777 Brassica carinata HOM05D006768 ORTHO05D008436 8.0e-28 127.1 112 67.0
BolC3t15699H Brassica oleracea HOM05D006768 ORTHO05D008436 8.0e-28 127.1 112 67.0
CARHR259330 Cardamine hirsuta HOM05D006768 ORTHO05D008436 8.0e-28 127.1 110 66.4
BcaB01g02871 Brassica carinata HOM05D006768 ORTHO05D008436 1.0e-27 126.7 104 62.5
BraA03t12013Z Brassica rapa HOM05D006768 ORTHO05D008436 1.4e-27 126.3 113 67.3
CDE08G1444 Ceratophyllum demersum HOM05D006768 ORTHO05D008436 1.4e-27 126.3 107 65.4
Sp6g09840 Schrenkiella parvula HOM05D006768 ORTHO05D008436 6.7e-27 124.0 114 63.2
Medtr5g059100 Medicago truncatula HOM05D006768 ORTHO05D008436 8.8e-27 123.6 104 66.3
Os03g0263700 Oryza sativa ssp. japonica HOM05D006768 ORTHO05D008436 3.3e-26 121.7 107 64.5
Zm00001eb398080 Zea mays HOM05D006768 ORTHO05D008436 4.4e-26 121.3 111 59.5
FAN20G0213 Fragaria x ananassa HOM05D000048 ORTHO05D004674 9.7e-26 120.2 91 73.6
Lj1g0025240 Lotus japonicus HOM05D006768 ORTHO05D008436 1.3e-25 119.8 118 59.3
HPP92_011177 Vanilla planifolia HOM05D006768 ORTHO05D008436 1.7e-25 119.4 105 63.8
A03p28000 Brassica napus HOM05D006768 ORTHO05D008436 3.7e-25 118.2 106 66.0
C03p33820 Brassica napus HOM05D006768 ORTHO05D008436 3.7e-25 118.2 106 66.0
Carub.0006s2676 Capsella rubella HOM05D006768 ORTHO05D008436 3.7e-25 118.2 113 61.9
VMungo0647G1658 Vigna mungo HOM05D006768 ORTHO05D008436 1.1e-24 116.7 106 63.2
AT4G08230 Arabidopsis thaliana HOM05D006768 ORTHO05D008436 1.8e-24 115.9 113 59.3
AL6G41870 Arabidopsis lyrata HOM05D006768 ORTHO05D008436 2.4e-24 115.5 111 63.1
CSS0018251 Camellia sinensis var. sinensis HOM05D006768 ORTHO05D008436 3.1e-24 115.2 88 77.3
Zm00001eb011610 Zea mays HOM05D006768 ORTHO05D008436 4.1e-24 114.8 110 59.1
THA.LOC104806813 Tarenaya hassleriana HOM05D006768 ORTHO05D008436 1.6e-23 112.8 108 61.1
SEGI_37020 Sequoiadendron giganteum HOM05D006768 ORTHO05D008436 2.7e-23 112.1 104 59.6
FAN27G1871 Fragaria x ananassa HOM05D000048 ORTHO05D004674 2.5e-21 105.5 80 76.2
Peaxi162Scf00000g61010 Petunia axillaris HOM05D006768 ORTHO05D008436 9.4e-21 103.6 66 81.8
Nitab4.5_0001142g0120 Nicotiana tabacum HOM05D006768 ORTHO05D008436 2.8e-17 92.0 97 54.6
Sabra05G0131600 Salix brachista HOM05D006768 ORTHO05D008436 6.3e-17 90.9 59 79.7
Aa31LG9G14330 Aethionema arabicum HOM05D006768 ORTHO05D008436 2.7e-15 85.5 86 62.8
Pp3c13_12030 Physcomitrium patens HOM05D006768 ORTHO05D008436 1.5e-13 79.7 105 49.5
AUR62023633 Chenopodium quinoa HOM05D006768 ORTHO05D008436 1.9e-13 79.3 71 69.0
Mapoly0043s0020 Marchantia polymorpha HOM05D006768 ORTHO05D008436 2.7e-12 75.5 114 45.6
Ca_28007_v3 Cicer arietinum L. HOM05D006768 ORTHO05D008436 1.4e-11 73.2 80 57.5
AagrBONN_evm.TU.Sc2ySwM_344.1603 Anthoceros agrestis HOM05D006768 ORTHO05D008436 9.8e-10 67.0 100 44.0
Nn1g08704 Nelumbo nucifera HOM05D006768 ORTHO05D008436 2.2e-09 65.9 53 71.7
DCAR_014111 Daucus carota HOM05D006768 ORTHO05D008436 4.5e-07 58.2 56 64.3
SMO308G0024 Selaginella moellendorffii HOM05D006768 ORTHO05D008436 1.3e-06 56.6 104 42.3


User provided reference genes

Program Settings