Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc36.18 Carica papaya HOM05D002142 ORTHO05D120824 3.3e-164 581.6 295 100.0
CsaV3_2G036160 Cucumis sativus L. HOM05D002142 ORTHO05D001189 1.0e-08 65.1 125 36.0
MELO3C024716.2 Cucumis melo HOM05D002142 ORTHO05D001189 5.2e-08 62.8 125 35.2
ClCG09G016660 Citrullus lanatus HOM05D002142 ORTHO05D001189 6.8e-08 62.4 125 33.6
FAN08G3346 Fragaria x ananassa HOM05D002142 ORTHO05D001189 8.8e-08 62.0 124 38.7
FAN13G0332 Fragaria x ananassa HOM05D002142 ORTHO05D001189 1.5e-07 61.2 124 37.9
FAN04G0632 Fragaria x ananassa HOM05D002142 ORTHO05D001189 2.6e-07 60.5 124 37.9
Oeu020470.1 Olea europaea HOM05D002142 ORTHO05D001189 4.4e-07 59.7 83 41.0
Rhsim02G0255400 Rhododendron simsii HOM05D002142 ORTHO05D001189 5.7e-07 59.3 115 39.1
RcHm_v2.0_Chr7g0187981 Rosa chinensis HOM05D002142 ORTHO05D001189 7.5e-07 58.9 146 33.6
vmacro11473 Vaccinium macrocarpon HOM05D002142 ORTHO05D001189 7.5e-07 58.9 113 37.2
Zm00001eb163070 Zea mays HOM05D002142 ORTHO05D001189 7.5e-07 58.9 79 41.8
Ah.13g070590 Amaranthus hybridus HOM05D002142 ORTHO05D001189 9.8e-07 58.5 62 43.5
Lj2A149G60 Lonicera japonica HOM05D002142 ORTHO05D001189 9.8e-07 58.5 113 37.2
PSO210G2933 Papaver somniferum HOM05D002142 ORTHO05D001189 9.8e-07 58.5 110 37.3
FvH4_5g10240 Fragaria vesca HOM05D002142 ORTHO05D001189 1.3e-06 58.2 124 37.1
FAN18G4199 Fragaria x ananassa HOM05D002142 ORTHO05D001189 1.3e-06 58.2 124 37.1
Thhalv10006652m.g Eutrema salsugineum HOM05D002142 ORTHO05D001189 1.7e-06 57.8 94 37.2
Atru.chr9.1824 Acer truncatum HOM05D002142 ORTHO05D001189 2.2e-06 57.4 68 44.1
A06p07050 Brassica napus HOM05D002142 ORTHO05D001189 2.2e-06 57.4 116 36.2
BraA06t23919Z Brassica rapa HOM05D002142 ORTHO05D001189 2.2e-06 57.4 116 36.2
Lalb_Chr02g0149531 Lupinus albus HOM05D002142 ORTHO05D001189 2.8e-06 57.0 122 32.0
CSS0039797 Camellia sinensis var. sinensis HOM05D002142 ORTHO05D001189 3.7e-06 56.6 89 43.8
Lalb_Chr06g0168571 Lupinus albus HOM05D002142 ORTHO05D001189 3.7e-06 56.6 68 42.6
Psat6g052800 Pisum sativum HOM05D002142 ORTHO05D001189 3.7e-06 56.6 125 32.0
Sp1g09000 Schrenkiella parvula HOM05D002142 ORTHO05D001189 3.7e-06 56.6 116 37.9
Thecc.03G214700 Theobroma cacao HOM05D002142 ORTHO05D001189 3.7e-06 56.6 176 30.1
TWI15G0084 Tripterygium wilfordii HOM05D002142 ORTHO05D001189 3.7e-06 56.6 118 35.6
Glyma.12G235000 Glycine max HOM05D002142 ORTHO05D001189 4.8e-06 56.2 115 33.0
Gohir.A02G094700 Gossypium hirsutum HOM05D002142 ORTHO05D001189 4.8e-06 56.2 105 34.3
SHI06884 Sapria himalayana HOM05D002142 ORTHO05D001189 4.8e-06 56.2 132 32.6
TWI81G0844 Tripterygium wilfordii HOM05D002142 ORTHO05D001189 4.8e-06 56.2 117 35.9
Actinidia22237 Actinidia chinensis HOM05D002142 ORTHO05D001189 6.3e-06 55.8 118 36.4
CSS0017387 Camellia sinensis var. sinensis HOM05D002142 ORTHO05D001189 6.3e-06 55.8 89 43.8
Gohir.D08G121000 Gossypium hirsutum HOM05D002142 ORTHO05D001189 6.3e-06 55.8 122 33.6
MD06G1126300 Malus domestica HOM05D002142 ORTHO05D001189 6.3e-06 55.8 130 34.6
Sed0009239 Sechium edule HOM05D002142 ORTHO05D001189 6.3e-06 55.8 136 36.0
GSVIVG01019716001 Vitis vinifera HOM05D002142 ORTHO05D001189 6.3e-06 55.8 92 38.0
AL2G17280 Arabidopsis lyrata HOM05D002142 ORTHO05D001189 8.3e-06 55.5 116 33.6
BcaC05g24889 Brassica carinata HOM05D002142 ORTHO05D001189 8.3e-06 55.5 105 35.2
BolC5t29604H Brassica oleracea HOM05D002142 ORTHO05D001189 8.3e-06 55.5 105 35.2
Eucgr.L00343 Eucalyptus grandis HOM05D002142 ORTHO05D001189 8.3e-06 55.5 68 42.6
Gohir.A12G243300 Gossypium hirsutum HOM05D002142 ORTHO05D001189 8.3e-06 55.5 124 32.3
MD06G1126200 Malus domestica HOM05D002142 ORTHO05D001189 8.3e-06 55.5 127 33.9
PSO761G0484 Papaver somniferum HOM05D002142 ORTHO05D001189 8.3e-06 55.5 110 36.4
QL02p026896 Quercus lobata HOM05D002142 ORTHO05D001189 8.3e-06 55.5 50 50.0
Zm00001eb110560 Zea mays HOM05D002142 ORTHO05D001189 8.3e-06 55.5 185 31.9


User provided reference genes

Program Settings