Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc36.148 Carica papaya HOM05D000649 ORTHO05D000513 2.5e-59 231.9 116 100.0
COL.COLO4_12046 Corchorus olitorius HOM05D000649 ORTHO05D000513 1.1e-17 93.6 103 57.3
Gorai.009G236000 Gossypium raimondii HOM05D000649 ORTHO05D000513 5.3e-17 91.3 97 60.8
Gohir.A05G225400 Gossypium hirsutum HOM05D000649 ORTHO05D000513 9.1e-17 90.5 96 60.4
Thecc.08G105100 Theobroma cacao HOM05D000649 ORTHO05D000513 2.0e-16 89.4 103 57.3
Gohir.D05G228100 Gossypium hirsutum HOM05D000649 ORTHO05D000513 4.5e-16 88.2 96 59.4
Duzib093G1504 Durio zibethinus HOM05D000649 ORTHO05D000513 1.0e-15 87.0 94 61.7
Gohir.A06G035100 Gossypium hirsutum HOM05D000649 ORTHO05D000513 1.7e-15 86.3 103 56.3
Gohir.D06G035700 Gossypium hirsutum HOM05D000649 ORTHO05D000513 1.7e-15 86.3 103 56.3
Gorai.010G039700 Gossypium raimondii HOM05D000649 ORTHO05D000513 1.7e-15 86.3 103 56.3
Ciclev10002164m.g Citrus clementina HOM05D000649 ORTHO05D000513 2.2e-15 85.9 109 56.0
Haze_22286 Corylus avellana HOM05D000649 ORTHO05D000513 3.2e-14 82.0 94 54.3
Duzib041G0154 Durio zibethinus HOM05D000649 ORTHO05D000513 3.2e-14 82.0 103 55.3
MD00G1010200 Malus domestica HOM05D000649 ORTHO05D000513 9.4e-14 80.5 109 46.8
Psat2g071280 Pisum sativum HOM05D000649 ORTHO05D000513 2.1e-13 79.3 112 48.2
QL12p037059 Quercus lobata HOM05D000649 ORTHO05D000513 8.0e-13 77.4 106 52.8
Ca_26218_v3 Cicer arietinum L. HOM05D000649 ORTHO05D000513 1.4e-12 76.6 92 51.1
Atru.chr13.1169 Acer truncatum HOM05D000649 ORTHO05D000513 2.3e-12 75.9 47 76.6
Atru.chr2.2578 Acer truncatum HOM05D000649 ORTHO05D000513 2.3e-12 75.9 47 76.6
Sabra02G0077200 Salix brachista HOM05D000649 ORTHO05D000513 2.3e-12 75.9 103 53.4
Manes.02G151600 Manihot esculenta HOM05D000649 ORTHO05D000513 3.0e-12 75.5 106 50.9
Phvul.008G174100 Phaseolus vulgaris HOM05D000649 ORTHO05D000513 6.8e-12 74.3 109 45.0
VMungo0647G0936 Vigna mungo HOM05D000649 ORTHO05D000513 6.8e-12 74.3 94 51.1
Glyma.06G102400 Glycine max HOM05D000649 ORTHO05D000513 1.5e-11 73.2 105 48.6
Medtr5g064120 Medicago truncatula HOM05D000649 ORTHO05D000513 1.5e-11 73.2 94 52.1
Dinv14341 Davidia involucrata HOM05D000649 ORTHO05D000513 4.4e-11 71.6 103 47.6
VMungo1309G2112 Vigna mungo HOM05D000649 ORTHO05D000513 5.7e-11 71.2 110 45.5
Lalb_Chr10g0102451 Lupinus albus HOM05D000649 ORTHO05D000513 7.5e-11 70.9 96 49.0
Glyma.13G089800 Glycine max HOM05D000649 ORTHO05D000513 1.7e-10 69.7 109 48.6
Glyma.14G174600 Glycine max HOM05D000649 ORTHO05D000513 1.7e-10 69.7 101 50.5
Phvul.009G032000 Phaseolus vulgaris HOM05D000649 ORTHO05D000513 2.2e-10 69.3 110 45.5
SalBow7G2627 Salvia bowleyana HOM05D000649 ORTHO05D000513 2.2e-10 69.3 97 49.5
Potri.002G098100 Populus trichocarpa HOM05D000649 ORTHO05D000513 3.7e-10 68.6 100 53.0
Rhsim06G0080400 Rhododendron simsii HOM05D000649 ORTHO05D000513 6.3e-10 67.8 100 54.0
Lj4A101G73 Lonicera japonica HOM05D000649 ORTHO05D000513 1.1e-09 67.0 101 50.5
ClCG11G014170 Citrullus lanatus HOM05D000649 ORTHO05D000513 1.8e-09 66.2 116 44.8
Prupe.1G519200 Prunus persica HOM05D000649 ORTHO05D000513 3.1e-09 65.5 109 45.0
Glyma.04G100600 Glycine max HOM05D000649 ORTHO05D000513 5.4e-09 64.7 107 45.8
GSVIVG01009045001 Vitis vinifera HOM05D000649 ORTHO05D000513 5.4e-09 64.7 99 48.5
Gohir.A05G266300 Gossypium hirsutum HOM05D000649 ORTHO05D000513 9.1e-09 63.9 69 58.0
Gohir.A05G266400 Gossypium hirsutum HOM05D000649 ORTHO05D000513 9.1e-09 63.9 69 58.0
TPR.G11228 Trifolium pratense HOM05D000649 ORTHO05D000513 1.2e-08 63.5 95 51.6
Cc10_g07060 Coffea canephora HOM05D000649 ORTHO05D000513 1.6e-08 63.2 108 45.4
Lalb_Chr04g0253121 Lupinus albus HOM05D000649 ORTHO05D000513 1.6e-08 63.2 105 47.6
Lalb_Chr17g0344201 Lupinus albus HOM05D000649 ORTHO05D000513 1.6e-08 63.2 109 45.0
CiPaw.07G178600 Carya illinoinensis HOM05D000649 ORTHO05D000513 2.0e-08 62.8 94 50.0
TAR376G1241 Trochodendron aralioides HOM05D000649 ORTHO05D000513 5.9e-08 61.2 103 48.5
TAR381G1543 Trochodendron aralioides HOM05D000649 ORTHO05D000513 7.7e-08 60.8 93 49.5
Gorai.009G280600 Gossypium raimondii HOM05D000649 ORTHO05D000513 1.7e-07 59.7 80 48.8
PGR031G3873 Punica granatum HOM05D000649 ORTHO05D000513 1.7e-07 59.7 112 42.9
HanXRQChr09g0246611 Helianthus annuus HOM05D000649 ORTHO05D000513 2.3e-07 59.3 98 44.9
RcHm_v2.0_Chr7g0243851 Rosa chinensis HOM05D000649 ORTHO05D000513 2.3e-07 59.3 113 45.1
Gohir.D05G268200 Gossypium hirsutum HOM05D000649 ORTHO05D000513 3.8e-07 58.5 80 47.5
Migut.N02888 Erythranthe guttata HOM05D000649 ORTHO05D000513 8.6e-07 57.4 111 44.1
MD08G1184900 Malus domestica HOM05D000649 ORTHO05D000513 2.5e-06 55.8 79 44.3
EL10Ac1g01193 Beta vulgaris HOM05D000649 ORTHO05D000513 5.5e-06 54.7 82 47.6
Nn5g30070 Nelumbo nucifera HOM05D000649 ORTHO05D000513 5.5e-06 54.7 95 45.3
Nitab4.5_0011257g0010 Nicotiana tabacum HOM05D000649 ORTHO05D000513 7.2e-06 54.3 125 39.2
Carub.0002s2516 Capsella rubella HOM05D000649 ORTHO05D000513 9.5e-06 53.9 113 40.7
DCAR_004219 Daucus carota HOM05D000649 ORTHO05D000513 9.5e-06 53.9 104 44.2


User provided reference genes

Program Settings