Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc351.6 Carica papaya HOM05D001171 ORTHO05D006126 2.6e-86 322.0 159 100.0
CiPaw.05G111400 Carya illinoinensis HOM05D001171 ORTHO05D006126 1.5e-57 226.5 184 63.0
Cfa009328 Carpinus fangiana HOM05D001171 ORTHO05D006126 2.5e-57 225.7 184 62.0
CiPaw.06G101600 Carya illinoinensis HOM05D001171 ORTHO05D006126 4.2e-57 224.9 184 63.6
MD13G1117700 Malus domestica HOM05D001171 ORTHO05D006126 9.5e-57 223.8 183 62.8
TWI36G0373 Tripterygium wilfordii HOM05D001171 ORTHO05D006126 3.6e-56 221.9 183 61.7
RcHm_v2.0_Chr4g0430551 Rosa chinensis HOM05D001171 ORTHO05D006126 1.4e-55 219.9 184 60.9
Ciclev10030679m.g Citrus clementina HOM05D001171 ORTHO05D006126 6.8e-55 217.6 184 60.9
Prupe.1G227300 Prunus persica HOM05D001171 ORTHO05D006126 1.2e-54 216.9 184 60.3
Sed0016407 Sechium edule HOM05D001171 ORTHO05D006126 1.2e-54 216.9 183 60.7
COL.COLO4_20384 Corchorus olitorius HOM05D001171 ORTHO05D006126 1.5e-54 216.5 184 60.3
FAN07G0777 Fragaria x ananassa HOM05D001171 ORTHO05D006126 1.5e-54 216.5 184 59.8
FAN17G1139 Fragaria x ananassa HOM05D001171 ORTHO05D006126 1.5e-54 216.5 184 60.3
Duzib268G1390 Durio zibethinus HOM05D001171 ORTHO05D006126 2.0e-54 216.1 184 60.9
CSS0006395 Camellia sinensis var. sinensis HOM05D001171 ORTHO05D006126 9.8e-54 213.8 184 59.2
Duzib248G1370 Durio zibethinus HOM05D001171 ORTHO05D006126 1.3e-53 213.4 184 60.3
FAN12G3364 Fragaria x ananassa HOM05D001171 ORTHO05D006126 1.3e-53 213.4 184 59.2
Thecc.02G210400 Theobroma cacao HOM05D001171 ORTHO05D006126 1.7e-53 213.0 184 60.9
CANSAT01G1884 Cannabis sativa HOM05D001171 ORTHO05D006126 2.2e-53 212.6 184 58.2
PGR102G0186 Punica granatum HOM05D001171 ORTHO05D006126 2.2e-53 212.6 183 57.9
MD16G1117900 Malus domestica HOM05D001171 ORTHO05D006126 2.9e-53 212.2 184 58.2
Actinidia20704 Actinidia chinensis HOM05D001171 ORTHO05D006126 3.7e-53 211.8 184 58.2
FAN22G1166 Fragaria x ananassa HOM05D001171 ORTHO05D006126 3.7e-53 211.8 184 58.7
FvH4_4g23910 Fragaria vesca HOM05D001171 ORTHO05D006126 6.3e-53 211.1 184 58.7
Potri.008G175400 Populus trichocarpa HOM05D001171 ORTHO05D006126 1.1e-52 210.3 184 57.6
Actinidia09656 Actinidia chinensis HOM05D001171 ORTHO05D006126 1.8e-52 209.5 184 57.1
Sabra08G0133800 Salix brachista HOM05D001171 ORTHO05D006126 2.4e-52 209.1 184 57.1
Haze_12399 Corylus avellana HOM05D001171 ORTHO05D006126 3.2e-52 208.8 171 60.8
MELO3C011454.2 Cucumis melo HOM05D001171 ORTHO05D006126 3.2e-52 208.8 183 56.8
Manes.12G012600 Manihot esculenta HOM05D001171 ORTHO05D006126 3.2e-52 208.8 184 55.4
QL03p053673 Quercus lobata HOM05D001171 ORTHO05D006126 3.2e-52 208.8 183 61.7
TAR622G0378 Trochodendron aralioides HOM05D001171 ORTHO05D006126 4.1e-52 208.4 183 57.4
Atru.chr11.2309 Acer truncatum HOM05D001171 ORTHO05D006126 7.0e-52 207.6 184 57.1
Eucgr.B03486 Eucalyptus grandis HOM05D001171 ORTHO05D006126 7.0e-52 207.6 183 57.9
Nn3g16495 Nelumbo nucifera HOM05D001171 ORTHO05D006126 3.5e-51 205.3 183 56.8
CsaV3_6G032260 Cucumis sativus L. HOM05D001171 ORTHO05D006126 5.9e-51 204.5 183 55.7
Cc00_g13520 Coffea canephora HOM05D001171 ORTHO05D006126 1.0e-50 203.8 184 54.9
Dinv10966 Davidia involucrata HOM05D001171 ORTHO05D006126 1.7e-50 203.0 184 57.6
GSVIVG01010452001 Vitis vinifera HOM05D001171 ORTHO05D006126 2.9e-50 202.2 184 54.9
Potri.010G060500 Populus trichocarpa HOM05D001171 ORTHO05D006126 3.9e-50 201.8 184 56.0
Dinv14829 Davidia involucrata HOM05D001171 ORTHO05D006126 6.6e-50 201.1 184 55.4
arahy.Tifrunner.gnm1.ann1.2F0YN9 Arachis hypogaea HOM05D001171 ORTHO05D006126 1.5e-49 199.9 184 53.8
Glyma.05G146600 Glycine max HOM05D001171 ORTHO05D006126 1.9e-49 199.5 184 54.9
Lj6A825T69 Lonicera japonica HOM05D001171 ORTHO05D006126 1.9e-49 199.5 184 54.9
HanXRQChr08g0207751 Helianthus annuus HOM05D001171 ORTHO05D006126 2.5e-49 199.1 184 53.8
Gohir.D05G311700 Gossypium hirsutum HOM05D001171 ORTHO05D006126 5.6e-49 198.0 184 55.4
Gorai.009G332800 Gossypium raimondii HOM05D001171 ORTHO05D006126 5.6e-49 198.0 184 55.4
Rhsim12G0099100 Rhododendron simsii HOM05D001171 ORTHO05D006126 9.5e-49 197.2 184 55.4
Lalb_Chr12g0206251 Lupinus albus HOM05D001171 ORTHO05D006126 1.2e-48 196.8 184 55.4
Gohir.A05G310900 Gossypium hirsutum HOM05D001171 ORTHO05D006126 1.6e-48 196.4 184 54.3
Phvul.002G174700 Phaseolus vulgaris HOM05D001171 ORTHO05D006126 2.1e-48 196.1 184 54.3
Peaxi162Scf00518g00435 Petunia axillaris HOM05D001171 ORTHO05D006126 2.8e-48 195.7 184 54.3
Lalb_Chr13g0294301 Lupinus albus HOM05D001171 ORTHO05D006126 4.7e-48 194.9 182 54.4
Zm00001eb305460 Zea mays HOM05D001171 ORTHO05D006126 4.7e-48 194.9 178 56.2
Lj4g0002448 Lotus japonicus HOM05D001171 ORTHO05D006126 6.2e-48 194.5 184 53.3
MBI11_g07459_MAGBIO Magnolia biondii HOM05D001171 ORTHO05D006126 6.2e-48 194.5 183 55.2
Hund06085 Selenicereus undatus HOM05D001171 ORTHO05D006126 1.0e-47 193.7 182 53.8
ClCG08G010100 Citrullus lanatus HOM05D001171 ORTHO05D006126 1.4e-47 193.4 170 55.9
A07p32560 Brassica napus HOM05D001171 ORTHO05D006126 3.1e-47 192.2 184 53.3
PSO063G5985 Papaver somniferum HOM05D001171 ORTHO05D006126 3.1e-47 192.2 182 52.7
BraA07t30880Z Brassica rapa HOM05D001171 ORTHO05D006126 4.0e-47 191.8 184 53.8
HPP92_007002 Vanilla planifolia HOM05D001171 ORTHO05D006126 4.0e-47 191.8 180 52.8
Hma1.2p1_0065F.1_g035610 Hydrangea macrophylla HOM05D001171 ORTHO05D006126 5.2e-47 191.4 183 53.0
arahy.Tifrunner.gnm1.ann1.8PLQ7K Arachis hypogaea HOM05D001171 ORTHO05D006126 8.9e-47 190.7 170 53.5
PSO782G3690 Papaver somniferum HOM05D001171 ORTHO05D006126 1.5e-46 189.9 182 52.2
Aa31sc475G10 Aethionema arabicum HOM05D001171 ORTHO05D006126 3.4e-46 188.7 183 51.4
Sp5g22350 Schrenkiella parvula HOM05D001171 ORTHO05D006126 3.4e-46 188.7 184 53.3
THA.LOC104825512 Tarenaya hassleriana HOM05D001171 ORTHO05D006126 3.4e-46 188.7 186 53.2
BcaB03g15201 Brassica carinata HOM05D001171 ORTHO05D006126 5.8e-46 188.0 184 53.3
Solyc12g035500.3 Solanum lycopersicum HOM05D001171 ORTHO05D006126 5.8e-46 188.0 184 49.5
Os07g0295800 Oryza sativa ssp. japonica HOM05D001171 ORTHO05D006126 7.5e-46 187.6 178 55.1
C06p38700 Brassica napus HOM05D001171 ORTHO05D006126 9.8e-46 187.2 185 53.0
Carub.0002s1375 Capsella rubella HOM05D001171 ORTHO05D006126 1.7e-45 186.4 184 53.8
CARHR059950 Cardamine hirsuta HOM05D001171 ORTHO05D006126 1.7e-45 186.4 184 52.7
Thhalv10018109m.g Eutrema salsugineum HOM05D001171 ORTHO05D006126 1.7e-45 186.4 184 53.8
Aqoxy5G03404 Aquilegia oxysepala HOM05D001171 ORTHO05D006126 2.2e-45 186.0 183 54.1
Sopen12g015420 Solanum pennellii HOM05D001171 ORTHO05D006126 2.2e-45 186.0 184 48.9
A07p33970 Brassica napus HOM05D001171 ORTHO05D006126 3.7e-45 185.3 184 52.7
ATR0561G160 Amborella trichopoda HOM05D001171 ORTHO05D006126 4.9e-45 184.9 182 52.7
BraA07t31024Z Brassica rapa HOM05D001171 ORTHO05D006126 8.3e-45 184.1 184 52.2
TPR.G17090 Trifolium pratense HOM05D001171 ORTHO05D006126 8.3e-45 184.1 184 50.5
BolC6t39150H Brassica oleracea HOM05D001171 ORTHO05D006126 1.1e-44 183.7 184 52.2
Ca_18053_v3 Cicer arietinum L. HOM05D001171 ORTHO05D006126 1.1e-44 183.7 184 51.6
Lsat_1_v5_gn_8_149401 Lactuca sativa HOM05D001171 ORTHO05D006126 2.4e-44 182.6 176 52.8
BcaC08g46164 Brassica carinata HOM05D001171 ORTHO05D006126 3.2e-44 182.2 184 51.6
C06p42880 Brassica napus HOM05D001171 ORTHO05D006126 3.2e-44 182.2 184 51.6
EL10Ac6g13486 Beta vulgaris HOM05D001171 ORTHO05D006126 4.1e-44 181.8 177 53.1
MSTRG.2457 Avicennia marina HOM05D001171 ORTHO05D006126 7.0e-44 181.0 184 50.5
Migut.E00023 Erythranthe guttata HOM05D001171 ORTHO05D006126 9.2e-44 180.6 183 53.0
CDE05G2832 Ceratophyllum demersum HOM05D001171 ORTHO05D006126 1.6e-43 179.9 185 52.4
ECA233G4311 Erigeron canadensis HOM05D001171 ORTHO05D006126 2.0e-43 179.5 176 51.1
VMungo0251G3321 Vigna mungo HOM05D001171 ORTHO05D006126 3.5e-43 178.7 168 54.2
AT1G67420 Arabidopsis thaliana HOM05D001171 ORTHO05D006126 6.0e-43 177.9 205 48.8
AUR62024123 Chenopodium quinoa HOM05D001171 ORTHO05D006126 2.3e-42 176.0 175 52.0
AUR62005606 Chenopodium quinoa HOM05D001171 ORTHO05D006126 3.9e-42 175.3 175 52.0
BolC6t38960H Brassica oleracea HOM05D001171 ORTHO05D006126 8.6e-42 174.1 208 47.1
GSVIVG01029097001 Vitis vinifera HOM05D001171 ORTHO05D006126 1.1e-41 173.7 115 70.4
BcaB03g15356 Brassica carinata HOM05D001171 ORTHO05D006126 1.9e-41 172.9 115 70.4
CAN.G828.1 Capsicum annuum HOM05D001171 ORTHO05D006126 1.9e-41 172.9 184 48.4
SGA_v2.0_scaffold87G27147 Striga asiatica HOM05D001171 ORTHO05D006126 4.3e-41 171.8 183 50.3
Medtr8g080470 Medicago truncatula HOM05D001171 ORTHO05D006126 3.6e-40 168.7 181 48.6
Sabra10G0045600 Salix brachista HOM05D001171 ORTHO05D006126 8.9e-39 164.1 108 69.4
unitig_744.g24422 Utricularia gibba HOM05D001171 ORTHO05D006126 8.9e-39 164.1 112 65.2
SEGI_39555 Sequoiadendron giganteum HOM05D001171 ORTHO05D006126 6.4e-37 157.9 121 60.3
SalBow8G5464 Salvia bowleyana HOM05D001171 ORTHO05D006126 8.3e-37 157.5 177 48.0
SHI17955 Sapria himalayana HOM05D001171 ORTHO05D006126 4.1e-36 155.2 156 53.2
Nitab4.5_0001098g0040 Nicotiana tabacum HOM05D001171 ORTHO05D006126 6.0e-35 151.4 170 46.5
Ah.03g136230 Amaranthus hybridus HOM05D001171 ORTHO05D006126 8.6e-34 147.5 177 45.2
Oeu058919.3 Olea europaea HOM05D001171 ORTHO05D006126 8.9e-31 137.5 142 50.0
Mapoly0009s0031 Marchantia polymorpha HOM05D001171 ORTHO05D006126 5.8e-30 134.8 115 56.5
Peaxi162Scf00134g00811 Petunia axillaris HOM05D001171 ORTHO05D006126 5.8e-30 134.8 96 65.6
Peaxi162Scf00548g00418 Petunia axillaris HOM05D001171 ORTHO05D006126 3.7e-29 132.1 104 62.5
Peaxi162Scf00768g00005 Petunia axillaris HOM05D001171 ORTHO05D006126 3.7e-29 132.1 104 62.5
SMO116G0357 Selaginella moellendorffii HOM05D001171 ORTHO05D006126 1.7e-26 123.2 112 46.4
Lj3C1067G5 Lonicera japonica HOM05D001171 ORTHO05D006126 6.6e-26 121.3 171 40.9
Pp3c11_25820 Physcomitrium patens HOM05D001171 ORTHO05D006126 3.6e-24 115.5 113 48.7
CSS0011449 Camellia sinensis var. sinensis HOM05D001171 ORTHO05D006126 6.2e-24 114.8 212 36.3
Glyma.08G103300 Glycine max HOM05D001171 ORTHO05D006126 7.3e-17 91.3 108 45.4
Cpa.g.sc43.41 Carica papaya HOM05D001171 ORTHO05D006126 3.4e-14 82.4 79 64.6
Nitab4.5_0000011g0310 Nicotiana tabacum HOM05D001171 ORTHO05D006126 7.1e-12 74.7 107 38.3
AagrBONN_evm.TU.Sc2ySwM_344.2095 Anthoceros agrestis HOM05D001171 ORTHO05D006126 1.5e-09 67.0 41 65.9
Peaxi162Scf00086g01218 Petunia axillaris HOM05D001171 ORTHO05D006126 1.8e-07 60.1 95 42.1
vmacro16110 Vaccinium macrocarpon HOM05D001171 ORTHO05D006126 2.6e-06 56.2 41 58.5


User provided reference genes

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