Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc35.77 Carica papaya HOM05D007081 ORTHO05D008834 1.7e-205 719.2 383 100.0
TWI39G1151 Tripterygium wilfordii HOM05D007081 ORTHO05D008834 2.9e-91 339.7 357 57.7
QL10p008493 Quercus lobata HOM05D007081 ORTHO05D008834 3.0e-88 329.7 336 60.1
QL10p008625 Quercus lobata HOM05D007081 ORTHO05D008834 3.0e-88 329.7 336 60.1
Cfa019177 Carpinus fangiana HOM05D007081 ORTHO05D008834 3.2e-82 309.7 376 54.8
TAR629G3400 Trochodendron aralioides HOM05D007081 ORTHO05D008834 4.1e-82 309.3 352 55.4
Gohir.D02G120200 Gossypium hirsutum HOM05D007081 ORTHO05D008834 5.4e-82 308.9 379 53.6
Gorai.005G133700 Gossypium raimondii HOM05D007081 ORTHO05D008834 7.0e-82 308.5 379 53.6
Thecc.03G023800 Theobroma cacao HOM05D007081 ORTHO05D008834 4.6e-81 305.8 377 53.3
Haze_07555 Corylus avellana HOM05D007081 ORTHO05D008834 1.7e-80 303.9 371 54.4
Dinv38554 Davidia involucrata HOM05D007081 ORTHO05D008834 1.1e-77 294.7 251 61.4
CiPaw.11G022400 Carya illinoinensis HOM05D007081 ORTHO05D008834 4.0e-77 292.7 347 50.7
Rhsim12G0166600 Rhododendron simsii HOM05D007081 ORTHO05D008834 4.0e-77 292.7 355 54.1
GSVIVG01007682001 Vitis vinifera HOM05D007081 ORTHO05D008834 6.8e-77 292.0 348 57.2
Duzib205G1440 Durio zibethinus HOM05D007081 ORTHO05D008834 4.4e-76 289.3 420 46.9
CANSAT80G0092 Cannabis sativa HOM05D007081 ORTHO05D008834 3.2e-74 283.1 362 51.4
Sopen03g031570 Solanum pennellii HOM05D007081 ORTHO05D008834 5.4e-74 282.3 384 50.5
Solyc03g112510.2 Solanum lycopersicum HOM05D007081 ORTHO05D008834 2.1e-73 280.4 384 51.0
PGR044G1978 Punica granatum HOM05D007081 ORTHO05D008834 2.7e-73 280.0 359 52.6
PGSC0003DMG400018175 Solanum tuberosum HOM05D007081 ORTHO05D008834 3.9e-72 276.2 383 49.3
Manes.14G062600 Manihot esculenta HOM05D007081 ORTHO05D008834 1.1e-71 274.6 359 49.0
Lj5A128T65 Lonicera japonica HOM05D007081 ORTHO05D008834 7.3e-71 271.9 318 50.0
HanXRQChr04g0101311 Helianthus annuus HOM05D007081 ORTHO05D008834 3.1e-69 266.5 349 52.7
CAN.G338.9 Capsicum annuum HOM05D007081 ORTHO05D008834 5.8e-68 262.3 340 51.8
MBI10_g32034_MAGBIO Magnolia biondii HOM05D007081 ORTHO05D008834 1.3e-67 261.2 363 50.1
arahy.Tifrunner.gnm1.ann1.4N1ELM Arachis hypogaea HOM05D007081 ORTHO05D008834 2.2e-67 260.4 382 48.7
Lsat_1_v5_gn_1_28080 Lactuca sativa HOM05D007081 ORTHO05D008834 8.4e-67 258.5 360 51.1
Eucgr.K02814 Eucalyptus grandis HOM05D007081 ORTHO05D008834 1.9e-66 257.3 372 49.5
arahy.Tifrunner.gnm1.ann1.G5F0QK Arachis hypogaea HOM05D007081 ORTHO05D008834 2.4e-66 256.9 372 48.9
Potri.002G197500 Populus trichocarpa HOM05D007081 ORTHO05D008834 2.4e-66 256.9 378 48.7
Peaxi162Scf00089g01519 Petunia axillaris HOM05D007081 ORTHO05D008834 9.2e-66 255.0 358 50.0
Ciclev10023760m.g Citrus clementina HOM05D007081 ORTHO05D008834 2.1e-65 253.8 351 48.7
Gohir.A03G091750 Gossypium hirsutum HOM05D007081 ORTHO05D008834 2.7e-65 253.4 317 53.3
TPR.G31056 Trifolium pratense HOM05D007081 ORTHO05D008834 3.5e-65 253.1 383 47.5
THA.LOC104809251 Tarenaya hassleriana HOM05D007081 ORTHO05D008834 1.0e-64 251.5 394 41.6
FvH4_5g05850 Fragaria vesca HOM05D007081 ORTHO05D008834 1.3e-64 251.1 343 50.1
Cc04_g12600 Coffea canephora HOM05D007081 ORTHO05D008834 1.1e-63 248.1 385 47.8
Sabra02G0160000 Salix brachista HOM05D007081 ORTHO05D008834 1.9e-63 247.3 381 46.5
RcHm_v2.0_Chr7g0192971 Rosa chinensis HOM05D007081 ORTHO05D008834 2.5e-63 246.9 339 51.3
ECA247G4072 Erigeron canadensis HOM05D007081 ORTHO05D008834 5.6e-63 245.7 347 49.3
MD14G1175400 Malus domestica HOM05D007081 ORTHO05D008834 2.8e-62 243.4 354 50.6
vmacro16631 Vaccinium macrocarpon HOM05D007081 ORTHO05D008834 2.8e-62 243.4 257 53.3
Migut.O00134 Erythranthe guttata HOM05D007081 ORTHO05D008834 3.6e-62 243.0 346 48.0
FAN08G1021 Fragaria x ananassa HOM05D007081 ORTHO05D008834 5.2e-61 239.2 352 42.9
Nitab4.5_0010304g0020 Nicotiana tabacum HOM05D007081 ORTHO05D008834 6.8e-61 238.8 358 46.9
Thhalv10025133m.g Eutrema salsugineum HOM05D007081 ORTHO05D008834 8.9e-61 238.4 352 47.2
Lj1g0004270 Lotus japonicus HOM05D007081 ORTHO05D008834 8.9e-61 238.4 386 45.3
Aa31LG2G16580 Aethionema arabicum HOM05D007081 ORTHO05D008834 1.2e-60 238.0 308 46.8
Sed0005220 Sechium edule HOM05D007081 ORTHO05D008834 1.2e-60 238.0 374 39.6
Carub.0007s0626 Capsella rubella HOM05D007081 ORTHO05D008834 1.5e-60 237.7 359 47.1
AT4G34140 Arabidopsis thaliana HOM05D007081 ORTHO05D008834 2.0e-60 237.3 365 45.5
SGA_v2.0_scaffold90G27870 Striga asiatica HOM05D007081 ORTHO05D008834 4.4e-60 236.1 278 47.5
Lalb_Chr11g0070341 Lupinus albus HOM05D007081 ORTHO05D008834 7.6e-60 235.3 383 44.9
Oeu040853.3 Olea europaea HOM05D007081 ORTHO05D008834 7.6e-60 235.3 403 40.9
Ca_16151_v3 Cicer arietinum L. HOM05D007081 ORTHO05D008834 1.4e-58 231.1 391 45.3
DCAR_016469 Daucus carota HOM05D007081 ORTHO05D008834 2.4e-58 230.3 210 56.7
Sc04g0001640 Simmondsia chinensis HOM05D007081 ORTHO05D008834 1.2e-57 228.0 251 49.4
Aqoxy3G02825 Aquilegia oxysepala HOM05D007081 ORTHO05D008834 1.0e-56 224.9 383 45.2
AL7G17230 Arabidopsis lyrata HOM05D007081 ORTHO05D008834 2.3e-56 223.8 359 44.0
CSS0021917 Camellia sinensis var. sinensis HOM05D007081 ORTHO05D008834 2.3e-56 223.8 286 47.6
FAN18G1088 Fragaria x ananassa HOM05D007081 ORTHO05D008834 2.3e-56 223.8 386 44.3
Sp7g31890 Schrenkiella parvula HOM05D007081 ORTHO05D008834 2.5e-55 220.3 277 45.5
Glyma.04G186500 Glycine max HOM05D007081 ORTHO05D008834 9.6e-55 218.4 413 41.2
A01p04290 Brassica napus HOM05D007081 ORTHO05D008834 4.8e-54 216.1 253 46.2
BraA01t00418Z Brassica rapa HOM05D007081 ORTHO05D008834 4.8e-54 216.1 253 46.2
Phvul.009G175500 Phaseolus vulgaris HOM05D007081 ORTHO05D008834 8.1e-54 215.3 262 46.6
Ah.02g110780 Amaranthus hybridus HOM05D007081 ORTHO05D008834 1.4e-53 214.5 351 46.7
unitig_26.g9614 Utricularia gibba HOM05D007081 ORTHO05D008834 1.4e-53 214.5 169 59.2
PSO063G2349 Papaver somniferum HOM05D007081 ORTHO05D008834 3.4e-52 209.9 319 40.4
Psat0s2597g0120 Pisum sativum HOM05D007081 ORTHO05D008834 4.5e-52 209.5 282 44.7
ClCG06G017230 Citrullus lanatus HOM05D007081 ORTHO05D008834 1.7e-51 207.6 394 43.1
C01p04690 Brassica napus HOM05D007081 ORTHO05D008834 2.9e-51 206.8 231 48.1
CSS0002377 Camellia sinensis var. sinensis HOM05D007081 ORTHO05D008834 2.9e-51 206.8 219 53.0
CsaV3_1G001260 Cucumis sativus L. HOM05D007081 ORTHO05D008834 3.8e-51 206.5 364 43.4
BolC1t00453H Brassica oleracea HOM05D007081 ORTHO05D008834 1.1e-50 204.9 352 43.2
MELO3C026274.2 Cucumis melo HOM05D007081 ORTHO05D008834 5.1e-48 196.1 396 42.4
PSO832G3615 Papaver somniferum HOM05D007081 ORTHO05D008834 1.3e-46 191.4 314 38.2
Prupe.5G169300 Prunus persica HOM05D007081 ORTHO05D008834 2.8e-46 190.3 285 51.6
Hund02770 Selenicereus undatus HOM05D007081 ORTHO05D008834 2.8e-46 190.3 388 42.0
AUR62008170 Chenopodium quinoa HOM05D007081 ORTHO05D008834 4.8e-46 189.5 236 46.2
CDE06G1300 Ceratophyllum demersum HOM05D007081 ORTHO05D008834 1.1e-45 188.3 338 43.8
Zm00001eb122970 Zea mays HOM05D007081 ORTHO05D008834 8.4e-43 178.7 346 35.3
ATR1152G054 Amborella trichopoda HOM05D007081 ORTHO05D008834 1.9e-42 177.6 356 41.9
COL.COLO4_30124 Corchorus olitorius HOM05D007081 ORTHO05D008834 1.9e-42 177.6 280 47.9
Medtr3g077300 Medicago truncatula HOM05D007081 ORTHO05D008834 7.1e-42 175.6 260 41.2
HPP92_000312 Vanilla planifolia HOM05D007081 ORTHO05D008834 6.0e-41 172.6 298 36.9
Nitab4.5_0001284g0100 Nicotiana tabacum HOM05D007081 ORTHO05D008834 7.9e-41 172.2 139 59.7
EL10Ac5g10689 Beta vulgaris HOM05D007081 ORTHO05D008834 1.0e-40 171.8 425 38.1
SEGI_13994 Sequoiadendron giganteum HOM05D007081 ORTHO05D008834 8.1e-38 162.2 298 33.6
HPP92_000303 Vanilla planifolia HOM05D007081 ORTHO05D008834 1.1e-37 161.8 347 38.9
AUR62028747 Chenopodium quinoa HOM05D007081 ORTHO05D008834 3.8e-35 153.3 157 49.7
Os01g0170100 Oryza sativa ssp. japonica HOM05D007081 ORTHO05D008834 5.5e-34 149.4 138 53.6
FAN04G1276 Fragaria x ananassa HOM05D007081 ORTHO05D008834 1.1e-31 141.7 241 40.2
AagrBONN_evm.TU.Sc2ySwM_117.2172 Anthoceros agrestis HOM05D007081 ORTHO05D008834 1.5e-31 141.4 329 29.2
Mapoly0102s0046 Marchantia polymorpha HOM05D007081 ORTHO05D008834 3.7e-22 110.2 174 37.4
CSS0048681 Camellia sinensis var. sinensis HOM05D007081 ORTHO05D008834 6.3e-22 109.4 62 80.6
HPP92_000296 Vanilla planifolia HOM05D007081 ORTHO05D008834 8.2e-22 109.0 399 31.1
Oeu015893.1 Olea europaea HOM05D007081 ORTHO05D008834 1.4e-21 108.2 153 41.2
Pp3c25_4990 Physcomitrium patens HOM05D007081 ORTHO05D008834 1.2e-17 95.1 233 32.2
CSS0035417 Camellia sinensis var. sinensis HOM05D007081 ORTHO05D008834 3.6e-17 93.6 62 72.6
Nitab4.5_0022301g0010 Nicotiana tabacum HOM05D007081 ORTHO05D008834 3.9e-16 90.1 216 40.3
CBR_g4092 Chara braunii HOM05D007081 ORTHO05D000048 2.6e-15 87.4 173 34.1
Glyma.06G179301 Glycine max HOM05D007081 ORTHO05D008834 2.8e-14 84.0 108 46.3
CAN.G12.29 Capsicum annuum HOM05D001989 ORTHO05D000346 4.2e-10 70.1 136 37.5
CARHR242710 Cardamine hirsuta HOM05D007081 ORTHO05D008834 1.0e-08 65.5 51 56.9
arahy.Tifrunner.gnm1.ann1.JE9H0F Arachis hypogaea HOM05D007081 ORTHO05D008834 2.2e-06 57.8 40 57.5


User provided reference genes

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