Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc35.18 Carica papaya HOM05D017488 ORTHO05D000006 1.0e-224 783.1 394 100.0
Cpa.g.sc34.165 Carica papaya HOM05D000003 ORTHO05D000006 2.3e-19 100.9 185 33.5
Cpa.g.sc17.89 Carica papaya HOM05D000003 ORTHO05D000006 5.6e-18 96.3 87 48.3
Cpa.g.sc66.107 Carica papaya HOM05D008736 ORTHO05D010193 3.7e-17 93.6 155 34.8
Cpa.g.sc670.3 Carica papaya HOM05D010178 ORTHO05D000006 6.9e-16 89.4 74 50.0
Cpa.g.sc70.27 Carica papaya HOM05D000003 ORTHO05D000006 1.2e-15 88.6 102 43.1
Cpa.g.sc0.2 Carica papaya HOM05D000003 ORTHO05D000006 4.5e-15 86.7 74 50.0
Cpa.g.sc33.113 Carica papaya HOM05D012693 ORTHO05D000006 5.8e-15 86.3 82 45.1
Cpa.g.sc18.97 Carica papaya HOM05D010178 ORTHO05D000006 3.8e-14 83.6 74 50.0
Cpa.g.sc170.62 Carica papaya HOM05D000003 ORTHO05D000006 8.4e-14 82.4 74 50.0
Cpa.g.sc637.2 Carica papaya HOM05D012693 ORTHO05D000006 4.2e-13 80.1 83 45.8
Cpa.g.sc425.5 Carica papaya HOM05D000003 ORTHO05D000006 1.2e-12 78.6 74 47.3
Cpa.g.c37061.2 Carica papaya HOM05D000003 ORTHO05D000006 2.1e-12 77.8 74 43.2
Cpa.g.sc5138.1 Carica papaya HOM05D000003 ORTHO05D000006 2.1e-12 77.8 73 53.4
Cpa.g.sc7.215 Carica papaya HOM05D000003 ORTHO05D000006 6.7e-11 72.8 123 36.6
Cpa.g.sc846.1 Carica papaya HOM05D000003 ORTHO05D000006 6.7e-11 72.8 72 44.4
Cpa.g.sc21.201 Carica papaya HOM05D000003 ORTHO05D000006 8.7e-11 72.4 61 45.9
Hund19901 Selenicereus undatus HOM05D000003 ORTHO05D000006 8.7e-11 72.4 222 30.2
Cpa.g.sc221.2 Carica papaya HOM05D000003 ORTHO05D000006 1.9e-10 71.2 63 47.6
Cpa.g.sc17.59 Carica papaya HOM05D000003 ORTHO05D000006 2.5e-10 70.9 61 50.8
Cpa.g.sc17.181 Carica papaya HOM05D000003 ORTHO05D000006 7.4e-10 69.3 74 43.2
Cpa.g.sc52.2 Carica papaya HOM05D000003 ORTHO05D000006 7.4e-10 69.3 99 40.4
Cpa.g.sc84.99 Carica papaya HOM05D010178 ORTHO05D000006 7.4e-10 69.3 57 52.6
Cpa.g.sc7.211 Carica papaya HOM05D000003 ORTHO05D000006 9.7e-10 68.9 74 44.6
Cpa.g.sc168.15 Carica papaya HOM05D000003 ORTHO05D000004 2.8e-09 67.4 69 46.4
Cpa.g.sc10.97 Carica papaya HOM05D000003 ORTHO05D000006 3.7e-09 67.0 73 46.6
Cpa.g.sc13.232 Carica papaya HOM05D002705 ORTHO05D004955 6.3e-09 66.2 81 38.3
Atru.chr4.2177 Acer truncatum HOM05D000003 ORTHO05D000004 1.4e-08 65.1 96 34.4
Cpa.g.sc594.3 Carica papaya HOM05D010178 ORTHO05D000006 2.4e-08 64.3 277 27.8
Cpa.g.sc743.6 Carica papaya HOM05D012693 ORTHO05D000006 2.4e-08 64.3 39 66.7
Hund22684 Selenicereus undatus HOM05D001165 ORTHO05D000006 3.1e-08 63.9 74 44.6
Cpa.g.sc32.55 Carica papaya HOM05D000003 ORTHO05D000006 5.3e-08 63.2 68 39.7
Cpa.g.sc40.5 Carica papaya HOM05D000003 ORTHO05D000006 5.3e-08 63.2 61 45.9
CSS0018102 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 6.9e-08 62.8 75 42.7
Cpa.g.sc138.24 Carica papaya HOM05D000003 ORTHO05D000006 9.0e-08 62.4 95 36.8
Cpa.g.sc74.39 Carica papaya HOM05D016174 ORTHO05D000006 1.5e-07 61.6 76 36.8
Atru.chr2.2596 Acer truncatum HOM05D000003 ORTHO05D000006 2.0e-07 61.2 92 31.5
CiPaw.02G060000 Carya illinoinensis HOM05D000003 ORTHO05D000006 2.0e-07 61.2 119 31.9
Cpa.g.sc25.167 Carica papaya HOM05D000230 ORTHO05D000176 2.6e-07 60.8 72 44.4
TAR252G0002 Trochodendron aralioides HOM05D000024 ORTHO05D000006 2.6e-07 60.8 93 34.4
Atru.chr2.3028 Acer truncatum HOM05D000003 ORTHO05D000004 4.5e-07 60.1 87 36.8
Gohir.A04G039600 Gossypium hirsutum HOM05D000003 ORTHO05D000006 4.5e-07 60.1 72 36.1
Atru.chr3.2348 Acer truncatum HOM05D000003 ORTHO05D000006 7.7e-07 59.3 92 32.6
Cpa.g.sc205.21 Carica papaya HOM05D000003 ORTHO05D000006 7.7e-07 59.3 61 44.3
Hund10805 Selenicereus undatus HOM05D001165 ORTHO05D000006 7.7e-07 59.3 204 27.9
CAN.G13136.1 Capsicum annuum HOM05D000003 ORTHO05D000006 1.0e-06 58.9 91 38.5
Cpa.g.sc43.16 Carica papaya HOM05D000003 ORTHO05D000006 1.0e-06 58.9 73 42.5
SHI34096 Sapria himalayana HOM05D000003 ORTHO05D000004 1.0e-06 58.9 80 37.5
Hund24716 Selenicereus undatus HOM05D001165 ORTHO05D010360 1.0e-06 58.9 92 32.6
Cpa.g.sc54.17 Carica papaya HOM05D000003 ORTHO05D000006 1.3e-06 58.5 74 40.5
Cpa.g.sc192.18 Carica papaya HOM05D018111 ORTHO05D000006 1.7e-06 58.2 70 41.4
SHI09342 Sapria himalayana HOM05D000003 ORTHO05D000004 1.7e-06 58.2 80 37.5
SHI09511 Sapria himalayana HOM05D000003 ORTHO05D000004 1.7e-06 58.2 80 37.5
Atru.chr6.713 Acer truncatum HOM05D000003 ORTHO05D000004 2.2e-06 57.8 115 30.4
CiPaw.05G173100 Carya illinoinensis HOM05D000003 ORTHO05D000006 2.2e-06 57.8 61 41.0
SHI45326 Sapria himalayana HOM05D000003 ORTHO05D000004 2.2e-06 57.8 80 37.5
SHI47243 Sapria himalayana HOM05D000003 ORTHO05D000004 2.2e-06 57.8 80 37.5
CiPaw.12G035100 Carya illinoinensis HOM05D000003 ORTHO05D000006 2.9e-06 57.4 74 39.2
Cpa.g.sc58.29 Carica papaya HOM05D026056 ORTHO05D000006 3.8e-06 57.0 85 38.8
CiPaw.01G042800 Carya illinoinensis HOM05D000003 ORTHO05D000006 3.8e-06 57.0 74 40.5
QL01p051842 Quercus lobata HOM05D001571 ORTHO05D002889 3.8e-06 57.0 90 30.0
Cpa.g.sc24.42 Carica papaya HOM05D000003 ORTHO05D000006 5.0e-06 56.6 118 30.5
Atru.chr6.171 Acer truncatum HOM05D000003 ORTHO05D000004 6.5e-06 56.2 68 36.8
Cpa.g.sc2.308 Carica papaya HOM05D000003 ORTHO05D000006 8.5e-06 55.8 112 29.5
CiPaw.01G225900 Carya illinoinensis HOM05D000003 ORTHO05D000006 8.5e-06 55.8 61 41.0
SHI16695 Sapria himalayana HOM05D000024 ORTHO05D000006 8.5e-06 55.8 180 23.3


User provided reference genes

Program Settings