Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc343.4 Carica papaya HOM05D007607 ORTHO05D009603 4.6e-60 234.6 137 100.0
Cfa015274 Carpinus fangiana HOM05D007607 ORTHO05D009603 4.7e-20 101.7 126 49.2
CiPaw.01G169900 Carya illinoinensis HOM05D007607 ORTHO05D009603 2.3e-19 99.4 126 57.9
Actinidia28975 Actinidia chinensis HOM05D007607 ORTHO05D009603 5.2e-19 98.2 136 49.3
QL10p057428 Quercus lobata HOM05D007607 ORTHO05D009603 6.8e-19 97.8 126 57.9
Haze_01353 Corylus avellana HOM05D007607 ORTHO05D009603 1.5e-18 96.7 126 54.0
QL10p057723 Quercus lobata HOM05D007607 ORTHO05D009603 1.5e-18 96.7 126 59.5
Potri.013G128700 Populus trichocarpa HOM05D007607 ORTHO05D009603 3.4e-18 95.5 127 59.1
Thecc.04G162800 Theobroma cacao HOM05D007607 ORTHO05D009603 3.4e-18 95.5 125 56.0
Gohir.A10G145500 Gossypium hirsutum HOM05D007607 ORTHO05D009603 4.4e-18 95.1 126 57.9
Gohir.D10G121500 Gossypium hirsutum HOM05D007607 ORTHO05D009603 1.7e-17 93.2 126 57.1
Gorai.011G133600 Gossypium raimondii HOM05D007607 ORTHO05D009603 1.7e-17 93.2 126 57.1
Duzib212G0637 Durio zibethinus HOM05D007607 ORTHO05D009603 3.7e-17 92.0 126 52.4
Ciclev10022842m.g Citrus clementina HOM05D007607 ORTHO05D009603 6.3e-17 91.3 128 56.2
RhsimUnG0015300 Rhododendron simsii HOM05D007607 ORTHO05D009603 1.8e-16 89.7 127 53.5
TAR362G0213 Trochodendron aralioides HOM05D007607 ORTHO05D009603 3.5e-15 85.5 132 53.0
CiPaw.02G100000 Carya illinoinensis HOM05D007607 ORTHO05D009603 7.7e-15 84.3 127 51.2
Dinv18311 Davidia involucrata HOM05D007607 ORTHO05D009603 1.0e-14 84.0 125 52.8
Manes.05G131900 Manihot esculenta HOM05D007607 ORTHO05D009603 1.0e-14 84.0 130 58.5
Rhsim02G0085800 Rhododendron simsii HOM05D007607 ORTHO05D009603 2.2e-14 82.8 127 54.3
PGR142G0203 Punica granatum HOM05D007607 ORTHO05D009603 3.8e-14 82.0 140 47.1
CSS0037895 Camellia sinensis var. sinensis HOM05D007607 ORTHO05D009603 1.9e-13 79.7 136 50.0
GSVIVG01038189001 Vitis vinifera HOM05D007607 ORTHO05D009603 2.5e-13 79.3 126 53.2
TWI15G0968 Tripterygium wilfordii HOM05D007607 ORTHO05D009603 3.2e-13 79.0 128 53.1
FvH4_1g00500 Fragaria vesca HOM05D007607 ORTHO05D009603 5.5e-13 78.2 130 53.8
CSS0042213 Camellia sinensis var. sinensis HOM05D007607 ORTHO05D009603 7.2e-13 77.8 104 55.8
CANSAT56G1551 Cannabis sativa HOM05D007607 ORTHO05D009603 7.2e-13 77.8 129 52.7
Atru.chr4.1510 Acer truncatum HOM05D007607 ORTHO05D009603 2.1e-12 76.3 133 48.9
RcHm_v2.0_Chr2g0085131 Rosa chinensis HOM05D007607 ORTHO05D009603 1.0e-11 73.9 130 53.8
MSTRG.24562 Avicennia marina HOM05D007607 ORTHO05D009603 1.8e-11 73.2 73 74.0
ClCG11G013470 Citrullus lanatus HOM05D007607 ORTHO05D009603 1.8e-11 73.2 129 51.9
Atru.chr4.1481 Acer truncatum HOM05D007607 ORTHO05D009603 4.0e-11 72.0 134 47.8
MD15G1147800 Malus domestica HOM05D007607 ORTHO05D009603 5.2e-11 71.6 134 46.3
Sc13g0006620 Simmondsia chinensis HOM05D007607 ORTHO05D009603 6.8e-11 71.2 128 43.8
Prupe.7G267000 Prunus persica HOM05D007607 ORTHO05D009603 8.8e-11 70.9 138 49.3
MBI10_g16327_MAGBIO Magnolia biondii HOM05D007607 ORTHO05D009603 1.5e-10 70.1 129 47.3
MD02G1004100 Malus domestica HOM05D007607 ORTHO05D009603 1.5e-10 70.1 103 50.5
Peaxi162Scf00883g00099 Petunia axillaris HOM05D007607 ORTHO05D009603 1.5e-10 70.1 126 52.4
Eucgr.H00285 Eucalyptus grandis HOM05D007607 ORTHO05D009603 2.0e-10 69.7 129 51.2
Aqoxy2G03795 Aquilegia oxysepala HOM05D007607 ORTHO05D009603 2.6e-10 69.3 134 47.0
MSTRG.22043 Avicennia marina HOM05D007607 ORTHO05D009603 3.4e-10 68.9 103 53.4
MELO3C011848.2 Cucumis melo HOM05D007607 ORTHO05D009603 3.4e-10 68.9 128 49.2
CsaV3_5G030090 Cucumis sativus L. HOM05D007607 ORTHO05D009603 3.4e-10 68.9 129 47.3
Hund12359 Selenicereus undatus HOM05D007607 ORTHO05D009603 3.4e-10 68.9 91 58.2
Sed0020904 Sechium edule HOM05D007607 ORTHO05D009603 4.4e-10 68.6 126 42.1
arahy.Tifrunner.gnm1.ann1.RJI6AK Arachis hypogaea HOM05D007607 ORTHO05D009603 5.7e-10 68.2 135 46.7
Lsat_1_v5_gn_8_9141 Lactuca sativa HOM05D007607 ORTHO05D009603 5.7e-10 68.2 127 44.9
Lalb_Chr16g0384371 Lupinus albus HOM05D007607 ORTHO05D009603 7.5e-10 67.8 143 40.6
PSO017G0391 Papaver somniferum HOM05D007607 ORTHO05D009603 1.3e-09 67.0 130 40.0
CAN.G1237.5 Capsicum annuum HOM05D007607 ORTHO05D009603 1.7e-09 66.6 76 67.1
Cc03_g14540 Coffea canephora HOM05D007607 ORTHO05D009603 1.7e-09 66.6 133 48.1
SalBow6G6796 Salvia bowleyana HOM05D007607 ORTHO05D009603 2.2e-09 66.2 127 48.8
Migut.N03053 Erythranthe guttata HOM05D007607 ORTHO05D009603 3.7e-09 65.5 127 48.0
Glyma.07G206400 Glycine max HOM05D007607 ORTHO05D009603 3.7e-09 65.5 147 44.2
Lj4g0023803 Lotus japonicus HOM05D007607 ORTHO05D009603 3.7e-09 65.5 141 44.0
PSO675G5570 Papaver somniferum HOM05D007607 ORTHO05D009603 4.8e-09 65.1 130 39.2
BcaB07g32146 Brassica carinata HOM05D007607 ORTHO05D009603 6.3e-09 64.7 91 59.3
BcaC05g26059 Brassica carinata HOM05D007607 ORTHO05D009603 6.3e-09 64.7 82 67.1
BcaC06g34863 Brassica carinata HOM05D007607 ORTHO05D009603 6.3e-09 64.7 82 59.8
C05p20400 Brassica napus HOM05D007607 ORTHO05D009603 6.3e-09 64.7 82 63.4
BolC5t30734H Brassica oleracea HOM05D007607 ORTHO05D009603 6.3e-09 64.7 82 67.1
BolC7t42778H Brassica oleracea HOM05D007607 ORTHO05D009603 6.3e-09 64.7 82 59.8
Carub.0001s2092 Capsella rubella HOM05D007607 ORTHO05D009603 8.3e-09 64.3 90 60.0
Sp1g19030 Schrenkiella parvula HOM05D007607 ORTHO05D009603 8.3e-09 64.3 37 91.9
EL10Ac3g06110 Beta vulgaris HOM05D007607 ORTHO05D009603 1.1e-08 63.9 90 53.3
A07p15130 Brassica napus HOM05D007607 ORTHO05D009603 1.1e-08 63.9 82 62.2
Solyc12g019550.2 Solanum lycopersicum HOM05D007607 ORTHO05D009603 1.1e-08 63.9 75 62.7
BcaB03g14267 Brassica carinata HOM05D007607 ORTHO05D009603 1.4e-08 63.5 39 84.6
Sopen12g009810 Solanum pennellii HOM05D007607 ORTHO05D009603 1.4e-08 63.5 127 47.2
Os09g0517000 Oryza sativa ssp. japonica HOM05D007607 ORTHO05D009603 1.8e-08 63.2 36 88.9
A06p17530 Brassica napus HOM05D007607 ORTHO05D009603 2.4e-08 62.8 82 62.2
Zm00001eb318610 Zea mays HOM05D007607 ORTHO05D009603 2.4e-08 62.8 69 56.5
Aa31LG7G5390 Aethionema arabicum HOM05D007607 ORTHO05D009603 3.1e-08 62.4 36 94.4
BraA06t24849Z Brassica rapa HOM05D007607 ORTHO05D009603 3.1e-08 62.4 38 84.2
THA.LOC104813690 Tarenaya hassleriana HOM05D007607 ORTHO05D009603 3.1e-08 62.4 76 59.2
AUR62002416 Chenopodium quinoa HOM05D007607 ORTHO05D009603 5.4e-08 61.6 70 55.7
AL1G34640 Arabidopsis lyrata HOM05D007607 ORTHO05D009603 9.1e-08 60.8 37 86.5
C07p22190 Brassica napus HOM05D007607 ORTHO05D009603 9.1e-08 60.8 82 58.5
Thhalv10009074m.g Eutrema salsugineum HOM05D007607 ORTHO05D009603 9.1e-08 60.8 80 63.8
unitig_22.g5705 Utricularia gibba HOM05D007607 ORTHO05D009603 1.2e-07 60.5 104 51.9
DCAR_005451 Daucus carota HOM05D007607 ORTHO05D009603 1.6e-07 60.1 123 47.2
ECA233G0487 Erigeron canadensis HOM05D007607 ORTHO05D009603 1.6e-07 60.1 81 48.1
AT1G21500 Arabidopsis thaliana HOM05D007607 ORTHO05D009603 2.0e-07 59.7 37 83.8
Nitab4.5_0000575g0080 Nicotiana tabacum HOM05D007607 ORTHO05D009603 2.0e-07 59.7 72 70.8
TPR.G23536 Trifolium pratense HOM05D007607 ORTHO05D009603 2.0e-07 59.7 142 46.5
Glyma.02G138600 Glycine max HOM05D007607 ORTHO05D009603 3.5e-07 58.9 84 56.0
Psat7g119360 Pisum sativum HOM05D007607 ORTHO05D009603 4.5e-07 58.5 145 43.4
HanXRQChr02g0059081 Helianthus annuus HOM05D007607 ORTHO05D009603 5.9e-07 58.2 85 56.5
AUR62023773 Chenopodium quinoa HOM05D007607 ORTHO05D009603 7.7e-07 57.8 70 65.7
Ca_18631_v3 Cicer arietinum L. HOM05D004461 ORTHO05D005543 7.7e-07 57.8 138 39.1
PGSC0003DMG400029159 Solanum tuberosum HOM05D007607 ORTHO05D009603 7.7e-07 57.8 127 47.2
CARHR021860 Cardamine hirsuta HOM05D007607 ORTHO05D009603 1.7e-06 56.6 37 81.1
Nn7g37525 Nelumbo nucifera HOM05D007607 ORTHO05D009603 2.9e-06 55.8 51 82.4
Nitab4.5_0008331g0020 Nicotiana tabacum HOM05D001883 ORTHO05D002184 2.9e-06 55.8 130 50.8
Phvul.003G059800 Phaseolus vulgaris HOM05D007607 ORTHO05D009603 2.9e-06 55.8 148 44.6
Medtr4g087540 Medicago truncatula HOM05D007607 ORTHO05D009603 8.6e-06 54.3 146 43.2


User provided reference genes

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