Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc340.5 Carica papaya HOM05D006674 ORTHO05D007954 2.0e-93 345.9 188 100.0
Duzib133G1445 Durio zibethinus HOM05D006674 ORTHO05D007954 1.0e-41 174.1 182 54.4
Dinv28183 Davidia involucrata HOM05D006674 ORTHO05D007954 3.3e-40 169.1 183 50.8
Sabra04G0056300 Salix brachista HOM05D006674 ORTHO05D007954 9.5e-40 167.5 182 51.1
Manes.01G119600 Manihot esculenta HOM05D006674 ORTHO05D007954 1.2e-39 167.2 185 53.0
Atru.chr1.1984 Acer truncatum HOM05D006674 ORTHO05D007954 1.1e-38 164.1 185 50.8
Potri.004G085200 Populus trichocarpa HOM05D006674 ORTHO05D007954 8.9e-38 161.0 182 51.1
Ciclev10011395m.g Citrus clementina HOM05D006674 ORTHO05D007954 2.0e-37 159.8 181 51.4
Haze_14280 Corylus avellana HOM05D006674 ORTHO05D007954 2.6e-37 159.5 191 50.8
Thecc.04G053800 Theobroma cacao HOM05D006674 ORTHO05D007954 3.4e-37 159.1 183 53.0
CSS0023224 Camellia sinensis var. sinensis HOM05D006674 ORTHO05D007954 4.9e-36 155.2 183 49.7
TWI77G1007 Tripterygium wilfordii HOM05D006674 ORTHO05D007954 4.9e-36 155.2 184 47.8
Nn4g24371 Nelumbo nucifera HOM05D006674 ORTHO05D007954 6.4e-36 154.8 184 47.3
Gohir.A07G073700 Gossypium hirsutum HOM05D006674 ORTHO05D007954 8.3e-36 154.5 182 49.5
Gorai.001G082800 Gossypium raimondii HOM05D006674 ORTHO05D007954 1.4e-35 153.7 182 49.5
Gohir.D07G078400 Gossypium hirsutum HOM05D006674 ORTHO05D007954 2.4e-35 152.9 182 48.9
Lj4C259T11 Lonicera japonica HOM05D006674 ORTHO05D007954 9.2e-35 151.0 177 50.8
Eucgr.F02873 Eucalyptus grandis HOM05D006674 ORTHO05D007954 3.5e-34 149.1 183 47.5
Aa31LG9G17490 Aethionema arabicum HOM05D006674 ORTHO05D007954 7.8e-34 147.9 186 45.2
Cc07_g13280 Coffea canephora HOM05D006674 ORTHO05D007954 1.3e-33 147.1 183 48.1
COL.COLO4_13419 Corchorus olitorius HOM05D006674 ORTHO05D007954 2.3e-33 146.4 182 48.9
RcHm_v2.0_Chr3g0491391 Rosa chinensis HOM05D006674 ORTHO05D007954 3.9e-33 145.6 184 46.7
GSVIVG01030703001 Vitis vinifera HOM05D006674 ORTHO05D007954 5.6e-32 141.7 171 49.7
Thhalv10027712m.g Eutrema salsugineum HOM05D006674 ORTHO05D007954 1.6e-31 140.2 180 43.9
AT5G37590 Arabidopsis thaliana HOM05D006674 ORTHO05D007954 4.7e-31 138.7 181 44.2
Carub.0007s3275 Capsella rubella HOM05D006674 ORTHO05D007954 4.7e-31 138.7 182 44.0
Prupe.3G166300 Prunus persica HOM05D006674 ORTHO05D007954 1.1e-30 137.5 183 43.2
ClCG05G010650 Citrullus lanatus HOM05D006674 ORTHO05D007954 4.0e-30 135.6 182 43.4
MD17G1268600 Malus domestica HOM05D006674 ORTHO05D007954 4.0e-30 135.6 182 44.5
A04p10750 Brassica napus HOM05D006674 ORTHO05D007954 6.8e-30 134.8 176 46.0
BolC4t26017H Brassica oleracea HOM05D006674 ORTHO05D007954 6.8e-30 134.8 176 46.6
BcaC02g09589 Brassica carinata HOM05D006674 ORTHO05D007954 2.0e-29 133.3 176 46.0
THA.LOC104805245 Tarenaya hassleriana HOM05D006674 ORTHO05D007954 2.0e-29 133.3 183 43.7
AL7G46330 Arabidopsis lyrata HOM05D006674 ORTHO05D007954 2.6e-29 132.9 180 43.9
BcaB06g27104 Brassica carinata HOM05D006674 ORTHO05D007954 7.6e-29 131.3 178 44.9
CARHR215300 Cardamine hirsuta HOM05D006674 ORTHO05D007954 7.6e-29 131.3 184 41.3
BraA04t16739Z Brassica rapa HOM05D006674 ORTHO05D007954 1.3e-28 130.6 176 44.9
FvH4_1g30190 Fragaria vesca HOM05D006674 ORTHO05D007954 1.3e-28 130.6 184 43.5
Actinidia28801 Actinidia chinensis HOM05D006674 ORTHO05D007954 4.9e-28 128.6 181 46.4
C04p44470 Brassica napus HOM05D006674 ORTHO05D007954 8.4e-28 127.9 177 45.8
CsaV3_3G017830 Cucumis sativus L. HOM05D006674 ORTHO05D007954 8.4e-28 127.9 182 41.2
Sp7g04510 Schrenkiella parvula HOM05D006674 ORTHO05D007954 2.4e-27 126.3 178 41.0
Sed0023155 Sechium edule HOM05D006674 ORTHO05D007954 4.1e-27 125.6 183 43.2
CAN.G222.57 Capsicum annuum HOM05D006674 ORTHO05D007954 5.4e-27 125.2 185 44.9
Nitab4.5_0001650g0150 Nicotiana tabacum HOM05D006674 ORTHO05D007954 1.6e-26 123.6 184 42.9
Hma1.2p1_1214F.1_g267580 Hydrangea macrophylla HOM05D006674 ORTHO05D007954 2.1e-26 123.2 198 41.4
HanXRQChr09g0259811 Helianthus annuus HOM05D006674 ORTHO05D007954 1.7e-25 120.2 186 43.5
Nitab4.5_0009806g0010 Nicotiana tabacum HOM05D006674 ORTHO05D007954 1.7e-25 120.2 184 41.8
Sc11g0004590 Simmondsia chinensis HOM05D006674 ORTHO05D007954 5.1e-25 118.6 175 43.4
Solyc11g011390.3 Solanum lycopersicum HOM05D006674 ORTHO05D007954 5.1e-25 118.6 185 43.8
PGSC0003DMG400013236 Solanum tuberosum HOM05D006674 ORTHO05D007954 1.1e-24 117.5 185 43.8
Aqoxy5G02269 Aquilegia oxysepala HOM05D006674 ORTHO05D007954 1.5e-24 117.1 184 42.9
Sopen11g006190 Solanum pennellii HOM05D006674 ORTHO05D007954 2.5e-24 116.3 185 42.7
ATR0753G123 Amborella trichopoda HOM05D006674 ORTHO05D007954 4.3e-24 115.5 184 39.7
Migut.H02229 Erythranthe guttata HOM05D006674 ORTHO05D007954 1.6e-23 113.6 180 44.4
Lsat_1_v5_gn_1_78040 Lactuca sativa HOM05D006674 ORTHO05D007954 1.1e-22 110.9 173 42.2
Lj6g0000042 Lotus japonicus HOM05D006674 ORTHO05D007954 1.1e-22 110.9 148 45.3
Rhsim08G0019400 Rhododendron simsii HOM05D006674 ORTHO05D007954 9.0e-22 107.8 173 41.0
CDE06G1904 Ceratophyllum demersum HOM05D006674 ORTHO05D007954 1.2e-21 107.5 182 36.8
Ca_17090_v3 Cicer arietinum L. HOM05D006674 ORTHO05D007954 1.2e-21 107.5 161 41.6
SalBow1G3838 Salvia bowleyana HOM05D006674 ORTHO05D007954 1.5e-21 107.1 177 39.5
vmacro18526 Vaccinium macrocarpon HOM05D006674 ORTHO05D007954 2.0e-21 106.7 176 42.6
ECA236G3280 Erigeron canadensis HOM05D006674 ORTHO05D007954 3.4e-21 105.9 185 39.5
Lalb_Chr15g0084971 Lupinus albus HOM05D006674 ORTHO05D007954 5.8e-21 105.1 167 39.5
PGR004G1202 Punica granatum HOM05D006674 ORTHO05D007954 2.2e-20 103.2 177 37.9
FAN26G0259 Fragaria x ananassa HOM05D006674 ORTHO05D007954 8.4e-20 101.3 192 38.0
QL02p059314 Quercus lobata HOM05D006674 ORTHO05D007954 1.9e-19 100.1 175 41.1
Phvul.001G229300 Phaseolus vulgaris HOM05D006674 ORTHO05D007954 9.3e-19 97.8 147 40.1
Medtr3g065220 Medicago truncatula HOM05D006674 ORTHO05D007954 2.1e-18 96.7 163 39.3
Glyma.18G041200 Glycine max HOM05D006674 ORTHO05D007954 2.7e-18 96.3 145 42.1
Glyma.11G215400 Glycine max HOM05D006674 ORTHO05D007954 6.0e-18 95.1 145 41.4
Psat5g120320 Pisum sativum HOM05D006674 ORTHO05D007954 7.8e-18 94.7 161 38.5
TPR.G24904 Trifolium pratense HOM05D006674 ORTHO05D007954 1.3e-17 94.0 154 39.0
CAN.G691.5 Capsicum annuum HOM05D006674 ORTHO05D007954 1.7e-17 93.6 153 41.8
EL10Ac2g03314 Beta vulgaris HOM05D006674 ORTHO05D007954 1.1e-16 90.9 182 34.1
AUR62042219 Chenopodium quinoa HOM05D006674 ORTHO05D007954 5.6e-16 88.6 183 36.6
CiPaw.03G073400 Carya illinoinensis HOM05D006674 ORTHO05D007954 1.1e-14 84.3 97 53.6
SGA_v2.0_scaffold108G30962 Striga asiatica HOM05D006674 ORTHO05D007954 3.1e-14 82.8 183 33.3
HPP92_002281 Vanilla planifolia HOM05D006674 ORTHO05D007954 1.9e-11 73.6 155 35.5
arahy.Tifrunner.gnm1.ann1.M54V7M Arachis hypogaea HOM05D006674 ORTHO05D007954 9.3e-11 71.2 131 35.1
arahy.Tifrunner.gnm1.ann1.V27PH4 Arachis hypogaea HOM05D006674 ORTHO05D007954 1.2e-10 70.9 131 35.1
VMungo1383G3322 Vigna mungo HOM05D006674 ORTHO05D007954 1.2e-10 70.9 118 40.7
unitig_27.g24984 Utricularia gibba HOM05D006674 ORTHO05D007954 2.1e-10 70.1 166 34.9
Hund13087 Selenicereus undatus HOM05D006674 ORTHO05D007954 6.0e-10 68.6 143 32.9
CAN.G222.66 Capsicum annuum HOM05D006674 ORTHO05D007954 3.0e-09 66.2 237 28.3
Peaxi162Scf00562g00214 Petunia axillaris HOM05D006674 ORTHO05D007954 6.7e-09 65.1 81 46.9
FAN19G0964 Fragaria x ananassa HOM05D000564 ORTHO05D004145 1.3e-07 60.8 62 46.8
Oeu058058.1 Olea europaea HOM05D013212 ORTHO05D007954 2.8e-07 59.7 74 45.9
Nitab4.5_0004239g0020 Nicotiana tabacum HOM05D006674 ORTHO05D007954 4.0e-06 55.8 68 45.6


User provided reference genes

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