Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc34.85 Carica papaya HOM05D000831 ORTHO05D000660 5.8e-40 167.2 87 100.0
MBI02_g37330_MAGBIO Magnolia biondii HOM05D000831 ORTHO05D000660 1.5e-08 62.8 92 43.5
Manes.12G082400 Manihot esculenta HOM05D000831 ORTHO05D000660 3.4e-08 61.6 95 44.2
TAR626G1434 Trochodendron aralioides HOM05D000831 ORTHO05D000660 9.9e-08 60.1 93 47.3
Nn1g07835 Nelumbo nucifera HOM05D000831 ORTHO05D000660 1.3e-07 59.7 92 43.5
Aa31LG6G7850 Aethionema arabicum HOM05D000831 ORTHO05D000660 1.7e-07 59.3 91 42.9
CSS0022159 Camellia sinensis var. sinensis HOM05D000831 ORTHO05D000660 1.7e-07 59.3 93 44.1
MBI02_g37333_MAGBIO Magnolia biondii HOM05D000831 ORTHO05D000660 1.7e-07 59.3 92 42.4
CSS0036635 Camellia sinensis var. sinensis HOM05D000831 ORTHO05D000660 3.8e-07 58.2 94 40.4
Nn1g07825 Nelumbo nucifera HOM05D000831 ORTHO05D000660 4.9e-07 57.8 92 42.4
Nn1g07832 Nelumbo nucifera HOM05D000831 ORTHO05D000660 4.9e-07 57.8 92 42.4
CSS0018979 Camellia sinensis var. sinensis HOM05D000831 ORTHO05D000660 6.4e-07 57.4 92 43.5
BcaC08g43871 Brassica carinata HOM05D000831 ORTHO05D000660 8.4e-07 57.0 92 40.2
BolC6t36409H Brassica oleracea HOM05D000831 ORTHO05D000660 8.4e-07 57.0 92 40.2
CSS0003063 Camellia sinensis var. sinensis HOM05D000831 ORTHO05D000660 8.4e-07 57.0 93 44.1
CSS0014453 Camellia sinensis var. sinensis HOM05D000831 ORTHO05D000660 8.4e-07 57.0 94 46.8
CSS0048593 Camellia sinensis var. sinensis HOM05D000831 ORTHO05D000660 8.4e-07 57.0 92 43.5
DCAR_009721 Daucus carota HOM05D000831 ORTHO05D000660 8.4e-07 57.0 90 41.1
TAR629G3265 Trochodendron aralioides HOM05D000831 ORTHO05D000660 8.4e-07 57.0 92 41.3
Actinidia12464 Actinidia chinensis HOM05D000831 ORTHO05D000660 1.1e-06 56.6 95 45.3
Carub.0001s3150 Capsella rubella HOM05D000831 ORTHO05D000660 1.1e-06 56.6 89 40.4
DCAR_009720 Daucus carota HOM05D000831 ORTHO05D000660 1.1e-06 56.6 90 41.1
MBI02_g37327_MAGBIO Magnolia biondii HOM05D000831 ORTHO05D000660 1.1e-06 56.6 92 41.3
Potri.019G116500 Populus trichocarpa HOM05D000831 ORTHO05D000660 1.1e-06 56.6 92 45.7
Prupe.3G230100 Prunus persica HOM05D000831 ORTHO05D000660 1.1e-06 56.6 94 36.2
TAR627G0398 Trochodendron aralioides HOM05D000831 ORTHO05D000660 1.1e-06 56.6 94 42.6
TAR627G1040 Trochodendron aralioides HOM05D000831 ORTHO05D000660 1.1e-06 56.6 94 42.6
Nn3g19950 Nelumbo nucifera HOM05D000831 ORTHO05D000660 1.4e-06 56.2 92 42.4
BcaB07g32973 Brassica carinata HOM05D000831 ORTHO05D000660 1.9e-06 55.8 92 39.1
BcaC08g43868 Brassica carinata HOM05D000831 ORTHO05D000660 1.9e-06 55.8 92 39.1
BolC6t36406H Brassica oleracea HOM05D000831 ORTHO05D000660 1.9e-06 55.8 92 39.1
Thhalv10009215m.g Eutrema salsugineum HOM05D000831 ORTHO05D000660 1.9e-06 55.8 89 39.3
Potri.013G147900 Populus trichocarpa HOM05D000831 ORTHO05D000660 1.9e-06 55.8 106 40.6
Sc12g0002700 Simmondsia chinensis HOM05D000831 ORTHO05D000660 1.9e-06 55.8 89 38.2
THA.LOC104806479 Tarenaya hassleriana HOM05D000831 ORTHO05D000660 1.9e-06 55.8 89 40.4
MBI02_g37326_MAGBIO Magnolia biondii HOM05D000831 ORTHO05D000660 2.4e-06 55.5 96 38.5
Sp6g07160 Schrenkiella parvula HOM05D000831 ORTHO05D000660 2.4e-06 55.5 91 40.7
THA.LOC104813078 Tarenaya hassleriana HOM05D000831 ORTHO05D000660 2.4e-06 55.5 95 44.2
TAR627G0747 Trochodendron aralioides HOM05D000831 ORTHO05D000660 2.4e-06 55.5 93 43.0
A05p24360 Brassica napus HOM05D000831 ORTHO05D000660 3.2e-06 55.1 89 37.1
BolC5t32539H Brassica oleracea HOM05D000831 ORTHO05D000660 3.2e-06 55.1 89 37.1
BraA05t21329Z Brassica rapa HOM05D000831 ORTHO05D000660 3.2e-06 55.1 89 37.1
CSS0007475 Camellia sinensis var. sinensis HOM05D000831 ORTHO05D000660 3.2e-06 55.1 95 40.0
CSS0040678 Camellia sinensis var. sinensis HOM05D000831 ORTHO05D000660 3.2e-06 55.1 92 42.4
CSS0047300 Camellia sinensis var. sinensis HOM05D000831 ORTHO05D000660 3.2e-06 55.1 92 42.4
CAN.G508.7 Capsicum annuum HOM05D000831 ORTHO05D000660 3.2e-06 55.1 89 39.3
MBI02_g37328_MAGBIO Magnolia biondii HOM05D000831 ORTHO05D000660 3.2e-06 55.1 91 37.4
Nn1g07829 Nelumbo nucifera HOM05D000831 ORTHO05D000660 3.2e-06 55.1 92 41.3
TWI75G0017 Tripterygium wilfordii HOM05D000831 ORTHO05D000660 3.2e-06 55.1 90 40.0
Actinidia12461 Actinidia chinensis HOM05D000831 ORTHO05D000660 4.2e-06 54.7 92 43.5
AL6G44110 Arabidopsis lyrata HOM05D000831 ORTHO05D000660 4.2e-06 54.7 92 38.0
CSS0015806 Camellia sinensis var. sinensis HOM05D000831 ORTHO05D000660 4.2e-06 54.7 92 40.2
CSS0037125 Camellia sinensis var. sinensis HOM05D000831 ORTHO05D000660 4.2e-06 54.7 92 42.4
DCAR_009718 Daucus carota HOM05D000831 ORTHO05D000660 4.2e-06 54.7 90 38.9
Thhalv10009214m.g Eutrema salsugineum HOM05D000831 ORTHO05D000660 4.2e-06 54.7 89 38.2
HanXRQChr06g0171051 Helianthus annuus HOM05D000831 ORTHO05D000660 4.2e-06 54.7 89 37.1
MBI02_g37329_MAGBIO Magnolia biondii HOM05D000831 ORTHO05D000660 4.2e-06 54.7 92 40.2
MBI02_g37332_MAGBIO Magnolia biondii HOM05D000831 ORTHO05D000660 4.2e-06 54.7 92 39.1
Nn1g07826 Nelumbo nucifera HOM05D000831 ORTHO05D000660 4.2e-06 54.7 93 40.9
Nn1g07836 Nelumbo nucifera HOM05D000831 ORTHO05D000660 4.2e-06 54.7 91 37.4
Rhsim06G0152500 Rhododendron simsii HOM05D000831 ORTHO05D000660 4.2e-06 54.7 94 40.4
Sp6g07170 Schrenkiella parvula HOM05D000831 ORTHO05D000660 4.2e-06 54.7 90 40.0
AT4G10270 Arabidopsis thaliana HOM05D000831 ORTHO05D000660 5.4e-06 54.3 91 40.7
BcaB05g23911 Brassica carinata HOM05D000831 ORTHO05D000660 5.4e-06 54.3 90 38.9
BraA09t38831Z Brassica rapa HOM05D000831 ORTHO05D000660 5.4e-06 54.3 92 38.0
DCAR_009722 Daucus carota HOM05D000831 ORTHO05D000660 5.4e-06 54.3 90 38.9
Dinv13827 Davidia involucrata HOM05D000831 ORTHO05D000660 5.4e-06 54.3 90 43.3
Dinv15499 Davidia involucrata HOM05D000831 ORTHO05D000660 5.4e-06 54.3 90 41.1
Medtr2g089945 Medicago truncatula HOM05D000831 ORTHO05D000660 5.4e-06 54.3 86 39.5
Nn1g00002 Nelumbo nucifera HOM05D000831 ORTHO05D000660 5.4e-06 54.3 89 42.7
Nn1g07821 Nelumbo nucifera HOM05D000831 ORTHO05D000660 5.4e-06 54.3 89 42.7
Nn1g07824 Nelumbo nucifera HOM05D000831 ORTHO05D000660 5.4e-06 54.3 89 42.7
BcaC08g43866 Brassica carinata HOM05D000831 ORTHO05D000660 7.1e-06 53.9 92 38.0
COL.COLO4_09491 Corchorus olitorius HOM05D000831 ORTHO05D000660 7.1e-06 53.9 94 37.2
Nn1g07823 Nelumbo nucifera HOM05D000831 ORTHO05D000660 7.1e-06 53.9 89 42.7
Nn1g07834 Nelumbo nucifera HOM05D000831 ORTHO05D000660 7.1e-06 53.9 95 37.9
Potri.019G116932 Populus trichocarpa HOM05D000831 ORTHO05D000660 7.1e-06 53.9 92 41.3
Potri.019G117100 Populus trichocarpa HOM05D000831 ORTHO05D000660 7.1e-06 53.9 92 41.3
TWI36G1218 Tripterygium wilfordii HOM05D000831 ORTHO05D000660 7.1e-06 53.9 91 38.5
TAR629G0738 Trochodendron aralioides HOM05D000831 ORTHO05D000660 7.1e-06 53.9 89 42.7
Aa31LG9G11730 Aethionema arabicum HOM05D000831 ORTHO05D000660 9.3e-06 53.5 93 37.6
BcaB07g32972 Brassica carinata HOM05D000831 ORTHO05D000660 9.3e-06 53.5 92 38.0
CSS0022903 Camellia sinensis var. sinensis HOM05D000831 ORTHO05D000660 9.3e-06 53.5 92 39.1
CSS0049002 Camellia sinensis var. sinensis HOM05D000831 ORTHO05D000660 9.3e-06 53.5 92 39.1
CAN.G508.5 Capsicum annuum HOM05D000831 ORTHO05D000660 9.3e-06 53.5 89 37.1
Cfa014533 Carpinus fangiana HOM05D000831 ORTHO05D000660 9.3e-06 53.5 92 40.2
Cfa014536 Carpinus fangiana HOM05D000831 ORTHO05D000660 9.3e-06 53.5 92 40.2
Cfa014539 Carpinus fangiana HOM05D000831 ORTHO05D000660 9.3e-06 53.5 93 40.9
MBI18_g27689_MAGBIO Magnolia biondii HOM05D000831 ORTHO05D000660 9.3e-06 53.5 101 34.7
Nn1g07830 Nelumbo nucifera HOM05D000831 ORTHO05D000660 9.3e-06 53.5 95 37.9
Nn5g28368 Nelumbo nucifera HOM05D000831 ORTHO05D000660 9.3e-06 53.5 91 40.7
PSO017G2687 Papaver somniferum HOM05D000831 ORTHO05D000660 9.3e-06 53.5 93 36.6
PSO017G4155 Papaver somniferum HOM05D000831 ORTHO05D000660 9.3e-06 53.5 93 36.6
PSO017G5540 Papaver somniferum HOM05D000831 ORTHO05D000660 9.3e-06 53.5 93 36.6
Potri.019G116600 Populus trichocarpa HOM05D000831 ORTHO05D000660 9.3e-06 53.5 92 43.5
Potri.019G116800 Populus trichocarpa HOM05D000831 ORTHO05D000660 9.3e-06 53.5 90 42.2
TAR627G0348 Trochodendron aralioides HOM05D000831 ORTHO05D000660 9.3e-06 53.5 93 43.0
vmacro12260 Vaccinium macrocarpon HOM05D000831 ORTHO05D000660 9.3e-06 53.5 87 41.4


User provided reference genes

Program Settings