Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc34.79 Carica papaya HOM05D004655 ORTHO05D005567 3.1e-31 137.9 72 100.0
HPP92_012362 Vanilla planifolia HOM05D004655 ORTHO05D005567 8.7e-26 119.8 71 85.9
TAR629G1482 Trochodendron aralioides HOM05D004655 ORTHO05D005567 1.9e-25 118.6 68 89.7
PGR042G1100 Punica granatum HOM05D004655 ORTHO05D005567 2.5e-25 118.2 69 85.5
QL08p036998 Quercus lobata HOM05D004655 ORTHO05D005567 2.5e-25 118.2 70 82.9
Duzib132G0437 Durio zibethinus HOM05D004655 ORTHO05D005567 3.3e-25 117.9 69 85.5
Duzib132G0466 Durio zibethinus HOM05D004655 ORTHO05D005567 3.3e-25 117.9 69 85.5
Thecc.02G170400 Theobroma cacao HOM05D004655 ORTHO05D005567 3.3e-25 117.9 69 87.0
Eucgr.A01774 Eucalyptus grandis HOM05D004655 ORTHO05D005567 4.3e-25 117.5 68 88.2
Lalb_Chr01g0005451 Lupinus albus HOM05D004655 ORTHO05D005567 5.7e-25 117.1 70 85.7
vmacro12257 Vaccinium macrocarpon HOM05D004655 ORTHO05D005567 5.7e-25 117.1 70 82.9
ATR0693G119 Amborella trichopoda HOM05D004655 ORTHO05D005567 7.4e-25 116.7 70 80.0
Nn1g03859 Nelumbo nucifera HOM05D004655 ORTHO05D005567 7.4e-25 116.7 70 85.7
GSVIVG01029990001 Vitis vinifera HOM05D004655 ORTHO05D005567 7.4e-25 116.7 70 82.9
CSS0017466 Camellia sinensis var. sinensis HOM05D004655 ORTHO05D005567 9.6e-25 116.3 70 87.1
COL.COLO4_13659 Corchorus olitorius HOM05D004655 ORTHO05D005567 9.6e-25 116.3 70 84.3
Lj8C118T0 Lonicera japonica HOM05D004655 ORTHO05D005567 9.6e-25 116.3 70 82.9
Gohir.D04G146200 Gossypium hirsutum HOM05D004655 ORTHO05D005567 1.6e-24 115.5 69 84.1
Gorai.012G132100 Gossypium raimondii HOM05D004655 ORTHO05D005567 1.6e-24 115.5 69 84.1
Hma1.2p1_0565F.1_g179650 Hydrangea macrophylla HOM05D004655 ORTHO05D005567 1.6e-24 115.5 64 90.6
Duzib052G1220 Durio zibethinus HOM05D004655 ORTHO05D005567 2.8e-24 114.8 67 86.6
Phvul.005G108600 Phaseolus vulgaris HOM05D004655 ORTHO05D005567 2.8e-24 114.8 66 89.4
Rhsim06G0153100 Rhododendron simsii HOM05D004655 ORTHO05D005567 3.7e-24 114.4 68 83.8
Actinidia18535 Actinidia chinensis HOM05D004655 ORTHO05D005567 4.8e-24 114.0 70 82.9
arahy.Tifrunner.gnm1.ann1.81TW8H Arachis hypogaea HOM05D004655 ORTHO05D005567 4.8e-24 114.0 70 82.9
CSS0004933 Camellia sinensis var. sinensis HOM05D004655 ORTHO05D005567 4.8e-24 114.0 70 81.4
CSS0020863 Camellia sinensis var. sinensis HOM05D004655 ORTHO05D005567 6.2e-24 113.6 69 82.6
CiPaw.04G122300 Carya illinoinensis HOM05D004655 ORTHO05D005567 6.2e-24 113.6 70 81.4
Ciclev10016098m.g Citrus clementina HOM05D004655 ORTHO05D005567 6.2e-24 113.6 70 81.4
Manes.13G152400 Manihot esculenta HOM05D004655 ORTHO05D005567 6.2e-24 113.6 69 84.1
SGA_v2.0_scaffold34G13911 Striga asiatica HOM05D004655 ORTHO05D005567 6.2e-24 113.6 68 85.3
Duzib248G0290 Durio zibethinus HOM05D004655 ORTHO05D005567 8.2e-24 113.2 69 81.2
Gohir.A04G106100 Gossypium hirsutum HOM05D004655 ORTHO05D005567 8.2e-24 113.2 69 82.6
Lj3g0017119 Lotus japonicus HOM05D004655 ORTHO05D005567 1.1e-23 112.8 70 81.4
MBI18_g27693_MAGBIO Magnolia biondii HOM05D004655 ORTHO05D005567 1.1e-23 112.8 70 81.4
CANSAT64G1156 Cannabis sativa HOM05D004655 ORTHO05D005567 1.4e-23 112.5 71 84.5
Cc05_g06070 Coffea canephora HOM05D004655 ORTHO05D005567 1.4e-23 112.5 70 81.4
Medtr4g045980 Medicago truncatula HOM05D004655 ORTHO05D005567 1.4e-23 112.5 70 81.4
Actinidia12466 Actinidia chinensis HOM05D004655 ORTHO05D005567 1.8e-23 112.1 70 81.4
arahy.Tifrunner.gnm1.ann1.S2JPPU Arachis hypogaea HOM05D004655 ORTHO05D005567 1.8e-23 112.1 70 81.4
arahy.Tifrunner.gnm1.ann1.YR7HYJ Arachis hypogaea HOM05D004655 ORTHO05D005567 1.8e-23 112.1 66 86.4
VMungo1080G0396 Vigna mungo HOM05D004655 ORTHO05D005567 1.8e-23 112.1 66 87.9
MD17G1085500 Malus domestica HOM05D004655 ORTHO05D005567 2.4e-23 111.7 69 79.7
Peaxi162Scf00007g02516 Petunia axillaris HOM05D004655 ORTHO05D005567 2.4e-23 111.7 70 81.4
THA.LOC104804073 Tarenaya hassleriana HOM05D004655 ORTHO05D005567 3.1e-23 111.3 69 81.2
TPR.G21652 Trifolium pratense HOM05D004655 ORTHO05D005567 3.1e-23 111.3 66 83.3
Potri.019G117900 Populus trichocarpa HOM05D004655 ORTHO05D005567 4.0e-23 110.9 69 81.2
arahy.Tifrunner.gnm1.ann1.XZ54ZU Arachis hypogaea HOM05D004655 ORTHO05D005567 6.9e-23 110.2 66 84.8
CsaV3_7G004070 Cucumis sativus L. HOM05D004655 ORTHO05D005567 9.0e-23 109.8 67 83.6
Nitab4.5_0001019g0090 Nicotiana tabacum HOM05D004655 ORTHO05D005567 9.0e-23 109.8 70 80.0
Atru.chr6.3084 Acer truncatum HOM05D004655 ORTHO05D005567 1.2e-22 109.4 71 78.9
MELO3C018772.2 Cucumis melo HOM05D004655 ORTHO05D005567 1.2e-22 109.4 67 82.1
Lj3g0013026 Lotus japonicus HOM05D004655 ORTHO05D005567 1.2e-22 109.4 65 84.6
Potri.013G148400 Populus trichocarpa HOM05D004655 ORTHO05D005567 1.2e-22 109.4 68 82.4
TWI36G0222 Tripterygium wilfordii HOM05D004655 ORTHO05D005567 1.2e-22 109.4 68 79.4
TWI75G0473 Tripterygium wilfordii HOM05D004655 ORTHO05D005567 1.2e-22 109.4 70 75.7
CAN.G508.2 Capsicum annuum HOM05D004655 ORTHO05D005567 1.5e-22 109.0 70 78.6
ClCG00G002920 Citrullus lanatus HOM05D004655 ORTHO05D005567 2.0e-22 108.6 67 82.1
ClCG02G001360 Citrullus lanatus HOM05D004655 ORTHO05D005567 2.0e-22 108.6 67 82.1
Sed0025834 Sechium edule HOM05D004655 ORTHO05D005567 2.0e-22 108.6 67 80.6
DCAR_012973 Daucus carota HOM05D004655 ORTHO05D005567 2.6e-22 108.2 69 78.3
CiPaw.03G168300 Carya illinoinensis HOM05D004655 ORTHO05D005567 3.4e-22 107.8 68 79.4
Dinv13829 Davidia involucrata HOM05D004655 ORTHO05D005567 3.4e-22 107.8 67 86.6
Sopen07g028730 Solanum pennellii HOM05D004655 ORTHO05D005567 3.4e-22 107.8 70 77.1
PGSC0003DMG400018330 Solanum tuberosum HOM05D004655 ORTHO05D005567 3.4e-22 107.8 70 77.1
Aa31LG8G17800 Aethionema arabicum HOM05D004655 ORTHO05D005567 4.5e-22 107.5 70 80.0
MSTRG.14176 Avicennia marina HOM05D004655 ORTHO05D005567 4.5e-22 107.5 68 82.4
ClCG02G001370 Citrullus lanatus HOM05D004655 ORTHO05D005567 4.5e-22 107.5 64 85.9
RcHm_v2.0_Chr2g0161411 Rosa chinensis HOM05D004655 ORTHO05D005567 4.5e-22 107.5 69 82.6
Glyma.12G200200 Glycine max HOM05D004655 ORTHO05D005567 5.8e-22 107.1 66 83.3
Lj1C737G5 Lonicera japonica HOM05D004655 ORTHO05D005567 7.6e-22 106.7 71 77.5
PSO675G0243 Papaver somniferum HOM05D004655 ORTHO05D005567 7.6e-22 106.7 68 79.4
Sp3g34160 Schrenkiella parvula HOM05D004655 ORTHO05D005567 7.6e-22 106.7 70 77.1
Nitab4.5_0000769g0070 Nicotiana tabacum HOM05D004655 ORTHO05D005567 1.3e-21 105.9 70 77.1
Sabra19G0118300 Salix brachista HOM05D004655 ORTHO05D005567 1.3e-21 105.9 66 81.8
AL3G54160 Arabidopsis lyrata HOM05D004655 ORTHO05D005567 1.7e-21 105.5 70 75.7
AT2G20890 Arabidopsis thaliana HOM05D004655 ORTHO05D005567 1.7e-21 105.5 70 75.7
Glyma.13G302100 Glycine max HOM05D004655 ORTHO05D005567 1.7e-21 105.5 66 81.8
Sabra13G0119700 Salix brachista HOM05D004655 ORTHO05D005567 1.7e-21 105.5 68 80.9
Carub.0003s3556 Capsella rubella HOM05D004655 ORTHO05D005567 2.2e-21 105.1 70 75.7
MD09G1097200 Malus domestica HOM05D004655 ORTHO05D005567 2.2e-21 105.1 67 77.6
PSO541G1277 Papaver somniferum HOM05D004655 ORTHO05D005567 2.9e-21 104.8 67 79.1
Psat7g149680 Pisum sativum HOM05D004655 ORTHO05D005567 3.8e-21 104.4 62 87.1
Sabra19G0135300 Salix brachista HOM05D004655 ORTHO05D005567 3.8e-21 104.4 68 79.4
CARHR111640 Cardamine hirsuta HOM05D004655 ORTHO05D005567 5.0e-21 104.0 70 74.3
HanXRQChr06g0171121 Helianthus annuus HOM05D004655 ORTHO05D005567 5.0e-21 104.0 70 77.1
FvH4_6g44420 Fragaria vesca HOM05D004655 ORTHO05D005567 6.5e-21 103.6 68 80.9
FAN02G3511 Fragaria x ananassa HOM05D004655 ORTHO05D005567 6.5e-21 103.6 68 80.9
FAN05G4368 Fragaria x ananassa HOM05D004655 ORTHO05D005567 6.5e-21 103.6 68 80.9
FAN14G2207 Fragaria x ananassa HOM05D004655 ORTHO05D005567 6.5e-21 103.6 68 80.9
BcaC07g41186 Brassica carinata HOM05D004655 ORTHO05D005567 8.4e-21 103.2 66 80.3
A09p58650 Brassica napus HOM05D004655 ORTHO05D005567 8.4e-21 103.2 66 80.3
C08p41940 Brassica napus HOM05D004655 ORTHO05D005567 8.4e-21 103.2 66 80.3
BolC8t51757H Brassica oleracea HOM05D004655 ORTHO05D005567 8.4e-21 103.2 66 80.3
BraA09t41251Z Brassica rapa HOM05D004655 ORTHO05D005567 8.4e-21 103.2 66 80.3
Haze_13070 Corylus avellana HOM05D004655 ORTHO05D005567 8.4e-21 103.2 66 83.3
unitig_21.g20001 Utricularia gibba HOM05D004655 ORTHO05D005567 8.4e-21 103.2 68 77.9
Aqoxy1G03905 Aquilegia oxysepala HOM05D004655 ORTHO05D005567 1.1e-20 102.8 70 77.1
Ca_01544_v3 Cicer arietinum L. HOM05D004655 ORTHO05D005567 1.1e-20 102.8 66 78.8
Cfa014528 Carpinus fangiana HOM05D004655 ORTHO05D005567 1.4e-20 102.4 68 79.4
FAN09G1462 Fragaria x ananassa HOM05D004655 ORTHO05D005567 1.4e-20 102.4 65 84.6
FAN02G1121 Fragaria x ananassa HOM05D004655 ORTHO05D005567 1.9e-20 102.1 68 79.4
Psat5g269080 Pisum sativum HOM05D004655 ORTHO05D005567 1.9e-20 102.1 66 78.8
Glyma.12G106600 Glycine max HOM05D004655 ORTHO05D005567 2.5e-20 101.7 62 83.9
BcaB08g34948 Brassica carinata HOM05D004655 ORTHO05D005567 3.2e-20 101.3 67 79.1
TAR627G0814 Trochodendron aralioides HOM05D004655 ORTHO05D005567 3.2e-20 101.3 64 84.4
VMungo1127G2245 Vigna mungo HOM05D004655 ORTHO05D005567 3.2e-20 101.3 62 83.9
Os07g0558500 Oryza sativa ssp. japonica HOM05D004655 ORTHO05D005567 5.5e-20 100.5 71 73.2
Ah.01g005210 Amaranthus hybridus HOM05D004655 ORTHO05D005567 7.1e-20 100.1 67 73.1
ECA246G4617 Erigeron canadensis HOM05D004655 ORTHO05D005567 7.1e-20 100.1 69 73.9
Prupe.3G228700 Prunus persica HOM05D004655 ORTHO05D005567 7.1e-20 100.1 62 83.9
Zm00001eb106830 Zea mays HOM05D004655 ORTHO05D005567 7.1e-20 100.1 62 82.3
AUR62032763 Chenopodium quinoa HOM05D004655 ORTHO05D005567 9.3e-20 99.8 62 82.3
AUR62037119 Chenopodium quinoa HOM05D004655 ORTHO05D005567 9.3e-20 99.8 62 82.3
DCAR_019200 Daucus carota HOM05D004655 ORTHO05D005567 9.3e-20 99.8 69 73.9
Thhalv10002049m.g Eutrema salsugineum HOM05D004655 ORTHO05D005567 9.3e-20 99.8 66 80.3
Glyma.06G299100 Glycine max HOM05D004655 ORTHO05D005567 9.3e-20 99.8 62 82.3
TPR.G18073 Trifolium pratense HOM05D004655 ORTHO05D005567 9.3e-20 99.8 66 75.8
EL10Ac9g20731 Beta vulgaris HOM05D004655 ORTHO05D005567 1.2e-19 99.4 62 79.0
Zm00001eb324100 Zea mays HOM05D004655 ORTHO05D005567 1.2e-19 99.4 71 71.8
Lsat_1_v5_gn_3_40720 Lactuca sativa HOM05D004655 ORTHO05D005567 3.5e-19 97.8 66 78.8
Lalb_Chr22g0356311 Lupinus albus HOM05D004655 ORTHO05D005567 3.5e-19 97.8 60 85.0
Hma1.2p1_0662F.1_g198360 Hydrangea macrophylla HOM05D004655 ORTHO05D005567 6.1e-19 97.1 64 79.7
SalBow7G2858 Salvia bowleyana HOM05D004655 ORTHO05D005567 6.1e-19 97.1 65 76.9
Migut.H01014 Erythranthe guttata HOM05D004655 ORTHO05D005567 7.9e-19 96.7 70 75.7
SalBow1G2826 Salvia bowleyana HOM05D004655 ORTHO05D005567 1.0e-18 96.3 64 79.7
Phvul.011G110700 Phaseolus vulgaris HOM05D004655 ORTHO05D005567 1.8e-18 95.5 62 80.6
Sc12g0002690 Simmondsia chinensis HOM05D004655 ORTHO05D005567 8.7e-18 93.2 60 83.3
Medtr2g089795 Medicago truncatula HOM05D004655 ORTHO05D005567 9.7e-17 89.7 61 77.0
Sabra19G0118700 Salix brachista HOM05D004655 ORTHO05D005567 2.2e-16 88.6 117 48.7
Nn1g06795 Nelumbo nucifera HOM05D004655 ORTHO05D005567 1.4e-15 85.9 49 89.8
Nn1g06798 Nelumbo nucifera HOM05D004655 ORTHO05D005567 1.4e-15 85.9 49 89.8
Pp3c19_17570 Physcomitrium patens HOM05D004655 ORTHO05D005567 1.1e-12 76.3 68 61.8
Mapoly0010s0156 Marchantia polymorpha HOM05D004655 ORTHO05D005567 1.9e-12 75.5 50 78.0
VMungo0720G1089 Vigna mungo HOM05D004655 ORTHO05D005567 4.2e-12 74.3 42 88.1
Ca_20707_v3 Cicer arietinum L. HOM05D004655 ORTHO05D005567 7.2e-12 73.6 70 57.1
SGA_v2.0_scaffold70G23458 Striga asiatica HOM05D004655 ORTHO05D005567 7.2e-12 73.6 42 83.3
Pp3c21_14540 Physcomitrium patens HOM05D004655 ORTHO05D005567 1.2e-11 72.8 68 58.8
AagrBONN_evm.TU.Sc2ySwM_344.251 Anthoceros agrestis HOM05D004655 ORTHO05D005567 6.1e-11 70.5 42 81.0
Hma1.2p1_0479F.1_g161430 Hydrangea macrophylla HOM05D001315 ORTHO05D001618 7.9e-11 70.1 44 79.5
SMO266G0053 Selaginella moellendorffii HOM05D004655 ORTHO05D005567 6.7e-10 67.0 42 73.8
CBR_g78876 Chara braunii HOM05D004655 ORTHO05D005567 4.3e-09 64.3 50 64.0
PRCOL_00003577 Prasinoderma coloniale HOM05D004655 ORTHO05D005567 3.4e-06 54.7 57 54.4


User provided reference genes

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