Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc34.158 Carica papaya HOM05D005953 ORTHO05D043536 2.2e-11 72.0 77 100.0
Manes.12G089522 Manihot esculenta HOM05D005953 ORTHO05D004056 3.0e-08 61.6 77 63.6
Manes.13G147000 Manihot esculenta HOM05D005953 ORTHO05D004056 3.9e-08 61.2 77 68.8
Ciclev10017361m.g Citrus clementina HOM05D005953 ORTHO05D004056 5.1e-08 60.8 78 48.7
Thecc.02G179300 Theobroma cacao HOM05D005953 ORTHO05D004056 1.5e-07 59.3 79 46.8
GSVIVG01020541001 Vitis vinifera HOM05D005953 ORTHO05D004056 2.6e-07 58.5 79 46.8
QL02p049480 Quercus lobata HOM05D005953 ORTHO05D004056 3.3e-07 58.2 76 47.4
QL08p038675 Quercus lobata HOM05D005953 ORTHO05D004056 3.3e-07 58.2 76 47.4
Oeu045817.1 Olea europaea HOM05D005953 ORTHO05D004056 4.4e-07 57.8 77 54.5
Atru.chr6.2998 Acer truncatum HOM05D005953 ORTHO05D004056 5.7e-07 57.4 77 46.8
Gohir.A04G103800 Gossypium hirsutum HOM05D005953 ORTHO05D004056 9.7e-07 56.6 77 45.5
Medtr2g090340 Medicago truncatula HOM05D005953 ORTHO05D004056 9.7e-07 56.6 77 45.5
ClCG07G002930 Citrullus lanatus HOM05D005953 ORTHO05D004056 1.3e-06 56.2 80 43.8
MELO3C013618.2 Cucumis melo HOM05D005953 ORTHO05D004056 1.3e-06 56.2 77 49.4
HanXRQChr17g0541941 Helianthus annuus HOM05D005953 ORTHO05D004056 1.3e-06 56.2 77 41.6
CARHR236000 Cardamine hirsuta HOM05D005953 ORTHO05D004056 1.7e-06 55.8 77 67.5
arahy.Tifrunner.gnm1.ann1.XD6XV6 Arachis hypogaea HOM05D005953 ORTHO05D004056 2.2e-06 55.5 77 45.5
MD17G1240800 Malus domestica HOM05D005953 ORTHO05D004056 2.2e-06 55.5 28 89.3
Solyc07g054060.3 Solanum lycopersicum HOM05D005953 ORTHO05D004056 2.2e-06 55.5 28 92.9
Sopen07g028000 Solanum pennellii HOM05D005953 ORTHO05D004056 2.2e-06 55.5 28 92.9
CiPaw.04G125700 Carya illinoinensis HOM05D005953 ORTHO05D004056 2.8e-06 55.1 77 63.6
CsaV3_7G004410 Cucumis sativus L. HOM05D005953 ORTHO05D004056 2.8e-06 55.1 80 42.5
Hma1.2p1_1201F.1_g266560 Hydrangea macrophylla HOM05D005953 ORTHO05D004056 2.8e-06 55.1 77 45.5
MD09G1247900 Malus domestica HOM05D005953 ORTHO05D004056 2.8e-06 55.1 29 86.2
Potri.019G100601 Populus trichocarpa HOM05D005953 ORTHO05D004056 2.8e-06 55.1 77 45.5
arahy.Tifrunner.gnm1.ann1.P9B1J4 Arachis hypogaea HOM05D005953 ORTHO05D004056 3.7e-06 54.7 28 89.3
Ca_01501_v3 Cicer arietinum L. HOM05D005953 ORTHO05D004056 3.7e-06 54.7 77 44.2
Potri.019G111501 Populus trichocarpa HOM05D005953 ORTHO05D004056 3.7e-06 54.7 77 57.1
Prupe.3G137400 Prunus persica HOM05D005953 ORTHO05D004056 3.7e-06 54.7 82 65.9
arahy.Tifrunner.gnm1.ann1.RLZ54R Arachis hypogaea HOM05D005953 ORTHO05D004056 4.8e-06 54.3 77 45.5
CDE08G1618 Ceratophyllum demersum HOM05D005953 ORTHO05D004056 4.8e-06 54.3 79 45.6
Eucgr.A01816 Eucalyptus grandis HOM05D005953 ORTHO05D004056 4.8e-06 54.3 29 86.2
Gohir.D04G143500 Gossypium hirsutum HOM05D005953 ORTHO05D004056 4.8e-06 54.3 77 44.2
Gorai.012G128900 Gossypium raimondii HOM05D005953 ORTHO05D004056 4.8e-06 54.3 77 44.2
MBI07_g12792_MAGBIO Magnolia biondii HOM05D005953 ORTHO05D004056 4.8e-06 54.3 29 82.8
TAR626G0584 Trochodendron aralioides HOM05D005953 ORTHO05D004056 4.8e-06 54.3 78 44.9
TAR627G0894 Trochodendron aralioides HOM05D005953 ORTHO05D004056 4.8e-06 54.3 29 79.3
Cfa014612 Carpinus fangiana HOM05D005953 ORTHO05D004056 6.3e-06 53.9 29 82.8
PGSC0003DMG400018306 Solanum tuberosum HOM05D005953 ORTHO05D004056 6.3e-06 53.9 28 89.3
Glyma.06G293200 Glycine max HOM05D005953 ORTHO05D004056 8.2e-06 53.5 26 92.3
Glyma.12G112600 Glycine max HOM05D005953 ORTHO05D004056 8.2e-06 53.5 26 92.3
Lalb_Chr03g0029431 Lupinus albus HOM05D005953 ORTHO05D004056 8.2e-06 53.5 26 92.3
Os10g0162100 Oryza sativa ssp. japonica HOM05D005953 ORTHO05D043536 8.2e-06 53.5 28 85.7


User provided reference genes

Program Settings