Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc34.144 Carica papaya HOM05D007014 ORTHO05D008894 3.4e-95 351.7 180 100.0
Dinv02170 Davidia involucrata HOM05D007014 ORTHO05D008894 3.9e-59 231.9 148 75.7
Prupe.3G155400 Prunus persica HOM05D007014 ORTHO05D008894 8.8e-59 230.7 154 73.4
QL08p038417 Quercus lobata HOM05D007014 ORTHO05D008894 2.0e-58 229.6 156 71.8
Thecc.02G177900 Theobroma cacao HOM05D007014 ORTHO05D008894 2.6e-58 229.2 149 75.2
Nitab4.5_0003022g0100 Nicotiana tabacum HOM05D007014 ORTHO05D008894 3.3e-58 228.8 152 73.7
PGSC0003DMG400007868 Solanum tuberosum HOM05D007014 ORTHO05D008894 3.3e-58 228.8 148 75.0
AL1G13150 Arabidopsis lyrata HOM05D007014 ORTHO05D008894 9.7e-58 227.3 152 71.7
Duzib052G1001 Durio zibethinus HOM05D007014 ORTHO05D008894 9.7e-58 227.3 158 73.4
RcHm_v2.0_Chr6g0277731 Rosa chinensis HOM05D007014 ORTHO05D008894 9.7e-58 227.3 154 74.7
Carub.0001s0276 Capsella rubella HOM05D007014 ORTHO05D008894 1.7e-57 226.5 152 72.4
Peaxi162Scf02133g00022 Petunia axillaris HOM05D007014 ORTHO05D008894 1.7e-57 226.5 154 72.1
PGSC0003DMG400007866 Solanum tuberosum HOM05D007014 ORTHO05D008894 2.2e-57 226.1 148 74.3
Haze_13147 Corylus avellana HOM05D007014 ORTHO05D008894 2.8e-57 225.7 152 72.4
Hma1.2p1_1201F.1_g266700 Hydrangea macrophylla HOM05D007014 ORTHO05D008894 2.8e-57 225.7 148 73.6
Sopen12g005310 Solanum pennellii HOM05D007014 ORTHO05D008894 3.7e-57 225.3 148 75.0
Cfa014594 Carpinus fangiana HOM05D007014 ORTHO05D008894 4.8e-57 224.9 152 71.1
COL.COLO4_07554 Corchorus olitorius HOM05D007014 ORTHO05D008894 4.8e-57 224.9 152 73.0
Potri.013G134000 Populus trichocarpa HOM05D007014 ORTHO05D008894 4.8e-57 224.9 146 76.0
Aa31LG1G20970 Aethionema arabicum HOM05D007014 ORTHO05D008894 6.3e-57 224.6 152 72.4
CAN.G486.11 Capsicum annuum HOM05D007014 ORTHO05D008894 8.2e-57 224.2 147 74.8
GSVIVG01030373001 Vitis vinifera HOM05D007014 ORTHO05D008894 1.4e-56 223.4 149 74.5
Potri.013G134102 Populus trichocarpa HOM05D007014 ORTHO05D008894 1.8e-56 223.0 146 75.3
CARHR002980 Cardamine hirsuta HOM05D007014 ORTHO05D008894 3.1e-56 222.2 152 71.1
Nn1g06593 Nelumbo nucifera HOM05D007014 ORTHO05D008894 3.1e-56 222.2 156 67.3
Sp1g02550 Schrenkiella parvula HOM05D007014 ORTHO05D008894 4.1e-56 221.9 148 71.6
THA.LOC104801176 Tarenaya hassleriana HOM05D007014 ORTHO05D008894 4.1e-56 221.9 151 70.2
Gohir.D13G066000 Gossypium hirsutum HOM05D007014 ORTHO05D008894 5.3e-56 221.5 156 72.4
Gorai.013G075300 Gossypium raimondii HOM05D007014 ORTHO05D008894 5.3e-56 221.5 156 72.4
AT1G03650 Arabidopsis thaliana HOM05D007014 ORTHO05D008894 6.9e-56 221.1 152 70.4
BcaC07g42241 Brassica carinata HOM05D007014 ORTHO05D008894 9.1e-56 220.7 152 71.1
Solyc12g010680.3 Solanum lycopersicum HOM05D007014 ORTHO05D008894 9.1e-56 220.7 148 72.3
FAN27G2134 Fragaria x ananassa HOM05D007014 ORTHO05D008894 1.2e-55 220.3 155 72.9
Oeu029922.1 Olea europaea HOM05D007014 ORTHO05D008894 1.5e-55 219.9 148 70.9
BcaC07g42236 Brassica carinata HOM05D007014 ORTHO05D008894 2.6e-55 219.2 148 72.3
TWI36G0686 Tripterygium wilfordii HOM05D007014 ORTHO05D008894 3.4e-55 218.8 151 70.2
vmacro09278 Vaccinium macrocarpon HOM05D007014 ORTHO05D008894 3.4e-55 218.8 148 70.3
Thhalv10008981m.g Eutrema salsugineum HOM05D007014 ORTHO05D008894 4.5e-55 218.4 151 70.9
MD09G1249800 Malus domestica HOM05D007014 ORTHO05D008894 4.5e-55 218.4 158 71.5
SalBow1G7232 Salvia bowleyana HOM05D007014 ORTHO05D008894 4.5e-55 218.4 148 71.6
CANSAT78G1474 Cannabis sativa HOM05D007014 ORTHO05D008894 7.7e-55 217.6 154 69.5
Sabra13G0113800 Salix brachista HOM05D007014 ORTHO05D008894 7.7e-55 217.6 146 74.0
FvH4_2g15130 Fragaria vesca HOM05D007014 ORTHO05D008894 1.3e-54 216.9 155 71.6
TAR629G1268 Trochodendron aralioides HOM05D007014 ORTHO05D008894 1.3e-54 216.9 153 69.9
EL10Ac9g20747 Beta vulgaris HOM05D007014 ORTHO05D008894 1.7e-54 216.5 159 66.7
MELO3C024591.2 Cucumis melo HOM05D007014 ORTHO05D008894 1.7e-54 216.5 151 68.2
Nitab4.5_0002575g0020 Nicotiana tabacum HOM05D007014 ORTHO05D008894 1.7e-54 216.5 169 65.7
Rhsim04G0068000 Rhododendron simsii HOM05D007014 ORTHO05D008894 1.7e-54 216.5 149 70.5
ClCG02G017580 Citrullus lanatus HOM05D007014 ORTHO05D008894 2.2e-54 216.1 151 68.2
Lj8A113T47 Lonicera japonica HOM05D007014 ORTHO05D008894 2.2e-54 216.1 149 70.5
Cc05_g06870 Coffea canephora HOM05D007014 ORTHO05D008894 2.9e-54 215.7 150 70.7
Ciclev10022606m.g Citrus clementina HOM05D007014 ORTHO05D008894 3.8e-54 215.3 156 66.7
Ca_28202_v3 Cicer arietinum L. HOM05D007014 ORTHO05D008894 5.0e-54 214.9 159 69.2
SGA_v2.0_scaffold307G48064 Striga asiatica HOM05D007014 ORTHO05D008894 5.0e-54 214.9 149 67.8
Gohir.A13G056000 Gossypium hirsutum HOM05D007014 ORTHO05D008894 8.5e-54 214.2 157 69.4
Medtr4g046047 Medicago truncatula HOM05D007014 ORTHO05D008894 1.1e-53 213.8 141 73.8
CSS0024097 Camellia sinensis var. sinensis HOM05D007014 ORTHO05D008894 1.9e-53 213.0 149 71.8
Sed0017748 Sechium edule HOM05D007014 ORTHO05D008894 1.9e-53 213.0 151 66.2
BcaC07g42250 Brassica carinata HOM05D007014 ORTHO05D008894 2.5e-53 212.6 156 67.9
C08p52830 Brassica napus HOM05D007014 ORTHO05D008894 2.5e-53 212.6 156 67.9
FAN15G2141 Fragaria x ananassa HOM05D007014 ORTHO05D008894 2.5e-53 212.6 147 74.1
Manes.12G090900 Manihot esculenta HOM05D007014 ORTHO05D008894 3.2e-53 212.2 148 69.6
Ciclev10022631m.g Citrus clementina HOM05D007014 ORTHO05D008894 5.5e-53 211.5 156 65.4
Psat7g157760 Pisum sativum HOM05D007014 ORTHO05D008894 5.5e-53 211.5 151 71.5
Aqoxy4G01010 Aquilegia oxysepala HOM05D007014 ORTHO05D008894 7.2e-53 211.1 153 63.4
Lj3g0024821 Lotus japonicus HOM05D007014 ORTHO05D008894 2.1e-52 209.5 138 74.6
BolC8t52799H Brassica oleracea HOM05D007014 ORTHO05D008894 3.6e-52 208.8 153 68.6
BraA09t42163Z Brassica rapa HOM05D007014 ORTHO05D008894 4.7e-52 208.4 153 68.0
Sc21g0002660 Simmondsia chinensis HOM05D007014 ORTHO05D008894 6.1e-52 208.0 151 66.9
BcaC07g42259 Brassica carinata HOM05D007014 ORTHO05D008894 7.9e-52 207.6 156 67.9
TPR.G21768 Trifolium pratense HOM05D007014 ORTHO05D008894 1.0e-51 207.2 141 72.3
MSTRG.12316 Avicennia marina HOM05D007014 ORTHO05D008894 1.4e-51 206.8 172 60.5
Glyma.12G111800 Glycine max HOM05D007014 ORTHO05D008894 2.3e-51 206.1 151 69.5
HanXRQChr17g0553541 Helianthus annuus HOM05D007014 ORTHO05D008894 2.3e-51 206.1 171 60.2
Migut.H01076 Erythranthe guttata HOM05D007014 ORTHO05D008894 6.7e-51 204.5 150 65.3
Phvul.011G117200 Phaseolus vulgaris HOM05D007014 ORTHO05D008894 1.5e-50 203.4 141 71.6
MBI17_g43194_MAGBIO Magnolia biondii HOM05D007014 ORTHO05D008894 4.4e-50 201.8 137 69.3
unitig_21.g20401 Utricularia gibba HOM05D007014 ORTHO05D008894 5.7e-50 201.4 136 67.6
CsaV3_6G013010 Cucumis sativus L. HOM05D007014 ORTHO05D008894 1.7e-49 199.9 169 59.2
FAN24G2354 Fragaria x ananassa HOM05D007014 ORTHO05D008894 1.7e-49 199.9 154 67.5
PSO210G2618 Papaver somniferum HOM05D007014 ORTHO05D008894 1.7e-49 199.9 136 66.9
arahy.Tifrunner.gnm1.ann1.YPG8JQ Arachis hypogaea HOM05D007014 ORTHO05D008894 1.4e-48 196.8 150 62.7
PSO832G4125 Papaver somniferum HOM05D007014 ORTHO05D008894 1.8e-48 196.4 136 66.2
arahy.Tifrunner.gnm1.ann1.1ZYA2W Arachis hypogaea HOM05D007014 ORTHO05D008894 3.1e-48 195.7 150 62.7
arahy.Tifrunner.gnm1.ann1.UXPW02 Arachis hypogaea HOM05D007014 ORTHO05D008894 4.1e-48 195.3 150 62.0
Glyma.06G293600 Glycine max HOM05D007014 ORTHO05D008894 5.3e-48 194.9 141 68.8
ATR0680G283 Amborella trichopoda HOM05D007014 ORTHO05D008894 1.2e-47 193.7 153 64.1
HPP92_002954 Vanilla planifolia HOM05D007014 ORTHO05D008894 1.6e-47 193.4 144 63.2
CDE02G4296 Ceratophyllum demersum HOM05D007014 ORTHO05D008894 1.0e-46 190.7 151 60.3
CiPaw.03G175500 Carya illinoinensis HOM05D007014 ORTHO05D008894 1.3e-46 190.3 143 65.0
VMungo1127G0420 Vigna mungo HOM05D007014 ORTHO05D008894 7.2e-45 184.5 165 59.4
Lsat_1_v5_gn_8_133041 Lactuca sativa HOM05D007014 ORTHO05D008894 1.2e-44 183.7 150 59.3
arahy.Tifrunner.gnm1.ann1.THUB96 Arachis hypogaea HOM05D007014 ORTHO05D008894 6.7e-43 177.9 133 63.9
Zm00001eb044470 Zea mays HOM05D007014 ORTHO05D008894 1.3e-41 173.7 149 58.4
Zm00001eb044400 Zea mays HOM05D007014 ORTHO05D008894 3.7e-41 172.2 149 58.4
ECA233G3399 Erigeron canadensis HOM05D007880 ORTHO05D003386 2.4e-40 169.5 151 56.3
TWI36G1550 Tripterygium wilfordii HOM05D007014 ORTHO05D008894 3.5e-39 165.6 163 50.9
Mapoly0101s0002 Marchantia polymorpha HOM05D007014 ORTHO05D008894 1.3e-38 163.7 172 52.9
Actinidia30478 Actinidia chinensis HOM05D007014 ORTHO05D008894 2.7e-36 156.0 96 78.1
Os10g0500400 Oryza sativa ssp. japonica HOM05D007014 ORTHO05D008894 8.8e-35 151.0 152 50.7
Lsat_1_v5_gn_8_132641 Lactuca sativa HOM05D007014 ORTHO05D008894 4.8e-33 145.2 90 75.6
AagrBONN_evm.TU.Sc2ySwM_344.4393 Anthoceros agrestis HOM05D007014 ORTHO05D008894 1.2e-31 140.6 152 50.0
C08p52730 Brassica napus HOM05D007014 ORTHO05D008894 4.5e-31 138.7 129 59.7
A09p68280 Brassica napus HOM05D001041 ORTHO05D000846 1.7e-30 136.7 127 59.8
Lalb_Chr01g0005301 Lupinus albus HOM05D007014 ORTHO05D008894 1.7e-30 136.7 90 72.2
QL12p004320 Quercus lobata HOM05D007014 ORTHO05D008894 8.8e-27 124.4 76 73.7
Ciclev10023600m.g Citrus clementina HOM05D007014 ORTHO05D008894 8.6e-22 107.8 82 64.6
Sabra11G0072100 Salix brachista HOM05D000036 ORTHO05D000095 4.3e-21 105.5 74 73.0
Sabra15G0066900 Salix brachista HOM05D000036 ORTHO05D000095 4.3e-21 105.5 74 73.0
Sabra13G0113700 Salix brachista HOM05D000264 ORTHO05D000152 8.0e-20 101.3 74 68.9
Hund01169 Selenicereus undatus HOM05D007014 ORTHO05D008894 2.3e-19 99.8 80 63.8
DCAR_013001 Daucus carota HOM05D007014 ORTHO05D008894 4.4e-18 95.5 81 63.0
AUR62037369 Chenopodium quinoa HOM05D007014 ORTHO05D008894 2.9e-17 92.8 65 69.2
PRCOL_00005877 Prasinoderma coloniale HOM05D007014 ORTHO05D008894 7.0e-16 88.2 94 51.1
MELO3C013609.2 Cucumis melo HOM05D007014 ORTHO05D008894 2.1e-12 76.6 64 54.7
Pp3c2_27490 Physcomitrium patens HOM05D007014 ORTHO05D008894 1.5e-10 70.5 78 50.0
Cre17.g705950 Chlamydomonas reinhardtii HOM05D007014 ORTHO05D008894 4.9e-09 65.5 125 33.6
SalBow1G7442 Salvia bowleyana HOM05D007014 ORTHO05D008894 1.1e-08 64.3 50 60.0
Haze_26658 Corylus avellana HOM05D002214 ORTHO05D005113 6.0e-07 58.5 102 36.3
Hund25700 Selenicereus undatus HOM05D004398 ORTHO05D005268 6.0e-07 58.5 146 28.8
Thecc.09G147500 Theobroma cacao HOM05D004398 ORTHO05D005268 6.6e-06 55.1 144 28.5


User provided reference genes

Program Settings