Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc34.125 Carica papaya HOM05D006722 ORTHO05D007944 2.1e-66 256.1 197 100.0
Thecc.02G175500 Theobroma cacao HOM05D006722 ORTHO05D007944 4.1e-17 92.4 199 36.7
TWI36G1477 Tripterygium wilfordii HOM05D006722 ORTHO05D007944 5.9e-16 88.6 188 31.9
Atru.chr6.3036 Acer truncatum HOM05D006722 ORTHO05D007944 5.0e-15 85.5 196 35.7
TWI75G0677 Tripterygium wilfordii HOM05D006722 ORTHO05D007944 2.5e-14 83.2 196 31.6
Duzib132G0356 Durio zibethinus HOM05D006722 ORTHO05D007944 3.2e-14 82.8 200 34.0
Ciclev10017219m.g Citrus clementina HOM05D006722 ORTHO05D007944 4.2e-14 82.4 191 34.6
Duzib052G0119 Durio zibethinus HOM05D006722 ORTHO05D007944 1.2e-13 80.9 199 33.7
Duzib052G0455 Durio zibethinus HOM05D006722 ORTHO05D007944 1.2e-13 80.9 199 33.7
TAR141G0004 Trochodendron aralioides HOM05D006722 ORTHO05D007944 4.4e-11 72.4 193 44.0
Glyma.13G299400 Glycine max HOM05D006722 ORTHO05D007944 1.7e-10 70.5 186 31.7
Lj3g0001103 Lotus japonicus HOM05D006722 ORTHO05D007944 2.2e-10 70.1 201 35.8
COL.COLO4_35406 Corchorus olitorius HOM05D006722 ORTHO05D007944 2.8e-10 69.7 191 45.0
AL3G54120 Arabidopsis lyrata HOM05D006722 ORTHO05D007944 1.1e-09 67.8 209 30.6
Carub.0003s3553 Capsella rubella HOM05D006722 ORTHO05D007944 1.1e-09 67.8 209 31.1
Prupe.3G234900 Prunus persica HOM05D006722 ORTHO05D007944 1.1e-09 67.8 187 31.0
Aa31LG8G17780 Aethionema arabicum HOM05D006722 ORTHO05D007944 1.4e-09 67.4 196 32.7
A09p58680 Brassica napus HOM05D006722 ORTHO05D007944 1.4e-09 67.4 200 32.0
BraA09t41254Z Brassica rapa HOM05D006722 ORTHO05D007944 1.4e-09 67.4 200 32.0
Lalb_Chr14g0366741 Lupinus albus HOM05D006722 ORTHO05D007944 1.4e-09 67.4 193 32.6
BcaC07g41191 Brassica carinata HOM05D006722 ORTHO05D007944 1.8e-09 67.0 200 32.0
C08p41970 Brassica napus HOM05D006722 ORTHO05D007944 1.8e-09 67.0 200 32.0
BolC8t51760H Brassica oleracea HOM05D006722 ORTHO05D007944 1.8e-09 67.0 200 32.0
Phvul.011G113200 Phaseolus vulgaris HOM05D006722 ORTHO05D007944 1.8e-09 67.0 191 46.1
AT2G20870 Arabidopsis thaliana HOM05D006722 ORTHO05D007944 2.4e-09 66.6 209 30.1
Thhalv10002109m.g Eutrema salsugineum HOM05D006722 ORTHO05D007944 1.2e-08 64.3 208 30.3
Sp3g34120 Schrenkiella parvula HOM05D006722 ORTHO05D007944 1.2e-08 64.3 206 32.0
Gohir.A03G158500 Gossypium hirsutum HOM05D006722 ORTHO05D007944 2.6e-08 63.2 188 29.8
Gohir.D02G181700 Gossypium hirsutum HOM05D006722 ORTHO05D007944 2.6e-08 63.2 188 29.8
Gorai.005G204200 Gossypium raimondii HOM05D006722 ORTHO05D007944 2.6e-08 63.2 188 29.8
BcaB08g34945 Brassica carinata HOM05D006722 ORTHO05D007944 3.5e-08 62.8 207 31.9
Lalb_Chr19g0135361 Lupinus albus HOM05D006722 ORTHO05D007944 3.5e-08 62.8 197 31.0
Rhsim06G0148700 Rhododendron simsii HOM05D006722 ORTHO05D007944 4.5e-08 62.4 196 30.1
Hma1.2p1_0875F.1_g231440 Hydrangea macrophylla HOM05D006722 ORTHO05D007944 1.0e-07 61.2 186 32.3
CARHR111610 Cardamine hirsuta HOM05D006722 ORTHO05D007944 1.7e-07 60.5 211 29.4
QL08p037794 Quercus lobata HOM05D006722 ORTHO05D007944 6.5e-07 58.5 101 42.6
THA.LOC104824711 Tarenaya hassleriana HOM05D006722 ORTHO05D007944 6.5e-07 58.5 198 29.3
Gohir.D12G141200 Gossypium hirsutum HOM05D006722 ORTHO05D007944 8.5e-07 58.2 196 30.1
Ca_01515_v3 Cicer arietinum L. HOM05D006722 ORTHO05D007944 1.5e-06 57.4 39 74.4
Lj8C115G8 Lonicera japonica HOM05D000389 ORTHO05D000287 1.5e-06 57.4 181 31.5
TPR.G35552 Trifolium pratense HOM05D006722 ORTHO05D007944 1.9e-06 57.0 36 77.8
Lj3g0012520 Lotus japonicus HOM05D006722 ORTHO05D007944 4.2e-06 55.8 197 29.4
Medtr4g037560 Medicago truncatula HOM05D006722 ORTHO05D007944 5.5e-06 55.5 182 29.1
MSTRG.14198 Avicennia marina HOM05D006722 ORTHO05D007944 7.2e-06 55.1 190 30.0
Manes.13G149300 Manihot esculenta HOM05D006722 ORTHO05D007944 7.2e-06 55.1 198 27.3
Phvul.005G106200 Phaseolus vulgaris HOM05D006722 ORTHO05D007944 7.2e-06 55.1 195 50.3
Medtr2g090185 Medicago truncatula HOM05D006722 ORTHO05D007944 9.4e-06 54.7 35 80.0


User provided reference genes

Program Settings