Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc34.123 Carica papaya HOM05D007208 ORTHO05D009090 6.9e-118 428.3 432 100.0
Sp1g02490 Schrenkiella parvula HOM05D007208 ORTHO05D009090 2.0e-61 240.7 199 57.8
THA.LOC104826027 Tarenaya hassleriana HOM05D007208 ORTHO05D009090 2.7e-61 240.4 194 61.3
Thhalv10007014m.g Eutrema salsugineum HOM05D007208 ORTHO05D009090 3.5e-61 240.0 199 59.8
AT1G03560 Arabidopsis thaliana HOM05D007208 ORTHO05D009090 3.8e-60 236.5 201 58.2
AL1G13070 Arabidopsis lyrata HOM05D007208 ORTHO05D009090 5.0e-60 236.1 201 57.2
CARHR002920 Cardamine hirsuta HOM05D007208 ORTHO05D009090 1.1e-59 235.0 202 59.4
Prupe.3G234000 Prunus persica HOM05D007208 ORTHO05D009090 2.5e-59 233.8 201 60.7
Ciclev10014552m.g Citrus clementina HOM05D007208 ORTHO05D009090 3.6e-58 229.9 200 61.0
MD17G1080900 Malus domestica HOM05D007208 ORTHO05D009090 3.6e-58 229.9 204 59.3
Atru.chr6.3038 Acer truncatum HOM05D007208 ORTHO05D009090 3.0e-57 226.9 201 60.7
CANSAT35G0587 Cannabis sativa HOM05D007208 ORTHO05D009090 9.8e-56 221.9 206 55.3
BcaB02g06917 Brassica carinata HOM05D007208 ORTHO05D009090 1.3e-55 221.5 202 55.9
PGR042G3663 Punica granatum HOM05D007208 ORTHO05D009090 4.9e-55 219.5 155 65.8
Gohir.D02G181800 Gossypium hirsutum HOM05D007208 ORTHO05D009090 6.3e-55 219.2 203 57.1
QL10p048755 Quercus lobata HOM05D007208 ORTHO05D009090 1.4e-54 218.0 195 57.9
ClCG02G001180 Citrullus lanatus HOM05D007208 ORTHO05D009090 3.1e-54 216.9 206 54.9
TAR629G2939 Trochodendron aralioides HOM05D007208 ORTHO05D009090 4.1e-54 216.5 194 57.2
COL.COLO4_35409 Corchorus olitorius HOM05D007208 ORTHO05D009090 1.6e-53 214.5 202 55.4
Thecc.05G160800 Theobroma cacao HOM05D007208 ORTHO05D009090 2.7e-53 213.8 199 54.8
Aa31LG1G20920 Aethionema arabicum HOM05D000389 ORTHO05D009090 4.5e-53 213.0 194 54.6
CsaV3_7G004270 Cucumis sativus L. HOM05D007208 ORTHO05D009090 4.5e-53 213.0 153 66.0
FAN02G1502 Fragaria x ananassa HOM05D007208 ORTHO05D009090 1.7e-52 211.1 202 53.0
TWI75G0324 Tripterygium wilfordii HOM05D007208 ORTHO05D009090 5.0e-52 209.5 170 55.9
RcHm_v2.0_Chr4g0446301 Rosa chinensis HOM05D007208 ORTHO05D009090 6.6e-52 209.1 153 64.7
Haze_13114 Corylus avellana HOM05D007208 ORTHO05D009090 8.6e-52 208.8 195 56.9
Potri.019G103400 Populus trichocarpa HOM05D007208 ORTHO05D009090 3.3e-51 206.8 208 52.9
FvH4_6g45000 Fragaria vesca HOM05D007208 ORTHO05D009090 9.5e-51 205.3 201 52.2
BcaC05g24521 Brassica carinata HOM05D007208 ORTHO05D009090 2.1e-50 204.1 202 53.5
BolC5t28979H Brassica oleracea HOM05D007208 ORTHO05D009090 2.1e-50 204.1 202 53.5
C05p02010 Brassica napus HOM05D007208 ORTHO05D009090 2.8e-50 203.8 202 53.5
GSVIVG01030557001 Vitis vinifera HOM05D007208 ORTHO05D009090 2.8e-50 203.8 207 55.6
Rhsim06G0149200 Rhododendron simsii HOM05D007208 ORTHO05D009090 3.6e-50 203.4 189 56.1
A10p02100 Brassica napus HOM05D007208 ORTHO05D009090 4.7e-50 203.0 201 52.2
FAN05G4557 Fragaria x ananassa HOM05D007208 ORTHO05D009090 1.0e-49 201.8 201 51.2
BraA10t42479Z Brassica rapa HOM05D007208 ORTHO05D009090 1.8e-49 201.1 201 51.2
Thecc.02G175200 Theobroma cacao HOM05D007208 ORTHO05D009090 1.8e-49 201.1 202 53.5
CiPaw.03G172500 Carya illinoinensis HOM05D007208 ORTHO05D009090 1.5e-48 198.0 199 52.8
CSS0042005 Camellia sinensis var. sinensis HOM05D007208 ORTHO05D009090 4.4e-48 196.4 203 51.7
Cc05_g06710 Coffea canephora HOM05D007208 ORTHO05D009090 2.4e-46 190.7 199 50.3
Manes.12G087100 Manihot esculenta HOM05D007208 ORTHO05D009090 5.4e-46 189.5 190 52.6
Nn1g06681 Nelumbo nucifera HOM05D007208 ORTHO05D009090 7.0e-46 189.1 144 59.0
Ah.01g002470 Amaranthus hybridus HOM05D007208 ORTHO05D009090 2.7e-45 187.2 180 52.2
Sed0017509 Sechium edule HOM05D007208 ORTHO05D009090 3.5e-45 186.8 200 47.5
Manes.12G086900 Manihot esculenta HOM05D007208 ORTHO05D009090 7.8e-45 185.7 159 57.2
EL10Ac9g22658 Beta vulgaris HOM05D007208 ORTHO05D009090 5.0e-44 183.0 206 49.5
Actinidia09879 Actinidia chinensis HOM05D000006 ORTHO05D000001 1.9e-43 181.0 176 51.1
FAN09G1518 Fragaria x ananassa HOM05D007208 ORTHO05D009090 1.2e-42 178.3 201 48.3
Aqoxy1G02638 Aquilegia oxysepala HOM05D007208 ORTHO05D009090 6.2e-42 176.0 143 56.6
Lj8P115T34 Lonicera japonica HOM05D007208 ORTHO05D009090 1.2e-40 171.8 134 60.4
Peaxi162Scf01258g00013 Petunia axillaris HOM05D007208 ORTHO05D009090 7.5e-40 169.1 206 48.1
Lsat_1_v5_gn_8_132240 Lactuca sativa HOM05D007208 ORTHO05D009090 3.7e-39 166.8 212 48.6
CAN.G168.33 Capsicum annuum HOM05D007208 ORTHO05D009090 4.9e-39 166.4 150 54.0
Dinv03836 Davidia involucrata HOM05D007208 ORTHO05D009090 6.4e-39 166.0 127 61.4
Sabra19G0114200 Salix brachista HOM05D007208 ORTHO05D009090 8.3e-39 165.6 204 46.6
HanXRQChr15g0492931 Helianthus annuus HOM05D007208 ORTHO05D009090 7.0e-38 162.5 215 45.1
MBI18_g13208_MAGBIO Magnolia biondii HOM05D007208 ORTHO05D009090 5.0e-36 156.4 145 55.2
ECA233G0015 Erigeron canadensis HOM05D007208 ORTHO05D009090 2.5e-35 154.1 184 46.2
HanXRQChr17g0557691 Helianthus annuus HOM05D007208 ORTHO05D009090 2.5e-35 154.1 201 46.3
TPR.G16118 Trifolium pratense HOM05D007208 ORTHO05D009090 2.5e-35 154.1 198 44.9
Sopen10g004330 Solanum pennellii HOM05D007208 ORTHO05D009090 9.5e-35 152.1 167 44.9
PGSC0003DMG400021677 Solanum tuberosum HOM05D007208 ORTHO05D009090 1.2e-34 151.8 167 44.9
Solyc10g008510.3 Solanum lycopersicum HOM05D007208 ORTHO05D009090 3.6e-34 150.2 221 38.0
Psat4g156960 Pisum sativum HOM05D007208 ORTHO05D009090 1.1e-33 148.7 206 46.1
Sc21g0002370 Simmondsia chinensis HOM05D007208 ORTHO05D009090 1.1e-33 148.7 142 51.4
Lalb_Chr03g0031321 Lupinus albus HOM05D007208 ORTHO05D009090 8.9e-33 145.6 146 54.1
Ca_27341_v3 Cicer arietinum L. HOM05D007208 ORTHO05D009090 1.2e-32 145.2 172 46.5
Ca_30865_v3 Cicer arietinum L. HOM05D007208 ORTHO05D009090 1.2e-32 145.2 172 46.5
SHI10482 Sapria himalayana HOM05D007208 ORTHO05D009090 2.0e-32 144.4 192 44.8
Medtr8g054410 Medicago truncatula HOM05D007208 ORTHO05D009090 2.6e-32 144.1 194 43.8
ATR0626G143 Amborella trichopoda HOM05D007208 ORTHO05D009090 5.8e-32 142.9 166 42.2
Carub.0001s0270 Capsella rubella HOM05D007208 ORTHO05D009090 1.9e-30 137.9 102 61.8
Lj3g0013344 Lotus japonicus HOM05D007208 ORTHO05D009090 1.9e-30 137.9 151 50.3
SGA_v2.0_scaffold261G45922 Striga asiatica HOM05D007208 ORTHO05D009090 1.9e-30 137.9 142 48.6
Hund14539 Selenicereus undatus HOM05D007208 ORTHO05D009090 4.1e-30 136.7 208 40.4
Eucgr.A01782 Eucalyptus grandis HOM05D007208 ORTHO05D009090 7.8e-29 132.5 100 63.0
PSO675G0351 Papaver somniferum HOM05D007208 ORTHO05D009090 2.3e-28 131.0 149 45.0
Hma1.2p1_0875F.1_g231460 Hydrangea macrophylla HOM05D007208 ORTHO05D009090 6.6e-28 129.4 189 41.3
Hma1.2p1_0875F.1_g231470 Hydrangea macrophylla HOM05D007208 ORTHO05D009090 6.6e-28 129.4 189 41.3
arahy.Tifrunner.gnm1.ann1.KEA2PN Arachis hypogaea HOM05D007208 ORTHO05D009090 1.1e-27 128.6 149 49.0
arahy.Tifrunner.gnm1.ann1.LJ4E0Z Arachis hypogaea HOM05D007208 ORTHO05D009090 1.5e-27 128.3 149 48.3
PSO541G2896 Papaver somniferum HOM05D007208 ORTHO05D009090 4.3e-27 126.7 149 43.6
arahy.Tifrunner.gnm1.ann1.B872W9 Arachis hypogaea HOM05D007208 ORTHO05D009090 1.4e-25 121.7 149 46.3
Nitab4.5_0000998g0040 Nicotiana tabacum HOM05D007208 ORTHO05D009090 5.2e-25 119.8 104 55.8
Nitab4.5_0000635g0090 Nicotiana tabacum HOM05D007208 ORTHO05D009090 9.9e-24 115.5 104 53.8
HPP92_009506 Vanilla planifolia HOM05D007208 ORTHO05D009090 4.9e-23 113.2 170 37.1
Glyma.10G265500 Glycine max HOM05D007208 ORTHO05D009090 1.1e-22 112.1 152 43.4
VMungo1127G1221 Vigna mungo HOM05D007208 ORTHO05D009090 3.2e-22 110.5 138 44.9
Phvul.011G168600 Phaseolus vulgaris HOM05D007208 ORTHO05D009090 4.1e-22 110.2 147 43.5
Oeu041287.1 Olea europaea HOM05D007208 ORTHO05D009090 7.8e-21 105.9 202 35.1
FAN14G2434 Fragaria x ananassa HOM05D007208 ORTHO05D009090 7.3e-19 99.4 120 45.8
arahy.Tifrunner.gnm1.ann1.55T2PK Arachis hypogaea HOM05D007208 ORTHO05D009090 4.7e-18 96.7 116 47.4
DCAR_021232 Daucus carota HOM05D007208 ORTHO05D009090 6.2e-18 96.3 82 56.1
AUR62014989 Chenopodium quinoa HOM05D007208 ORTHO05D009090 6.8e-17 92.8 69 59.4
SalBow1G0905 Salvia bowleyana HOM05D007208 ORTHO05D009090 3.4e-16 90.5 157 33.8
CDE05G2253 Ceratophyllum demersum HOM05D007208 ORTHO05D009090 1.7e-12 78.2 81 44.4
SEGI_00392 Sequoiadendron giganteum HOM05D007208 ORTHO05D009090 1.7e-12 78.2 107 35.5
Zm00001eb069300 Zea mays HOM05D007208 ORTHO05D009090 5.6e-11 73.2 178 32.0
RcHm_v2.0_Chr2g0162291 Rosa chinensis HOM05D007208 ORTHO05D009090 4.8e-10 70.1 57 61.4
Duzib248G0625 Durio zibethinus HOM05D007208 ORTHO05D009090 3.1e-09 67.4 74 45.9
Gorai.005G204300 Gossypium raimondii HOM05D007208 ORTHO05D009090 1.9e-06 58.2 88 40.9


User provided reference genes

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