Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc34.11 Carica papaya HOM05D004277 ORTHO05D005148 2.3e-238 828.6 427 100.0
Dinv19596 Davidia involucrata HOM05D004277 ORTHO05D005148 3.2e-152 542.3 413 68.8
Ciclev10007189m.g Citrus clementina HOM05D004277 ORTHO05D005148 2.3e-150 536.2 393 69.7
CSS0042003 Camellia sinensis var. sinensis HOM05D004277 ORTHO05D005148 2.6e-149 532.7 400 69.8
FAN21G0666 Fragaria x ananassa HOM05D004277 ORTHO05D005148 2.6e-149 532.7 393 69.2
CiPaw.11G062700 Carya illinoinensis HOM05D004277 ORTHO05D005148 4.4e-149 531.9 407 66.3
FAN16G3091 Fragaria x ananassa HOM05D004277 ORTHO05D005148 1.3e-148 530.4 393 69.0
GSVIVG01036797001 Vitis vinifera HOM05D004277 ORTHO05D005148 1.3e-148 530.4 414 66.7
RcHm_v2.0_Chr5g0025751 Rosa chinensis HOM05D004277 ORTHO05D005148 2.2e-148 529.6 385 69.6
Thecc.07G167700 Theobroma cacao HOM05D004277 ORTHO05D005148 4.8e-148 528.5 400 68.8
FvH4_3g15310 Fragaria vesca HOM05D004277 ORTHO05D005148 6.3e-148 528.1 393 68.7
Potri.007G067700 Populus trichocarpa HOM05D004277 ORTHO05D005148 1.4e-147 526.9 403 68.2
Prupe.4G136200 Prunus persica HOM05D004277 ORTHO05D005148 1.8e-147 526.6 386 70.5
FAN11G0660 Fragaria x ananassa HOM05D004277 ORTHO05D005148 1.2e-146 523.9 393 68.4
Haze_07823 Corylus avellana HOM05D004277 ORTHO05D005148 1.1e-144 517.3 337 75.7
Manes.03G176500 Manihot esculenta HOM05D004277 ORTHO05D005148 4.2e-144 515.4 410 65.6
COL.COLO4_05147 Corchorus olitorius HOM05D004277 ORTHO05D004634 9.4e-144 514.2 391 69.1
Atru.chr1.126 Acer truncatum HOM05D004277 ORTHO05D005148 2.3e-142 509.6 393 66.4
QL12p004433 Quercus lobata HOM05D004277 ORTHO05D005148 7.5e-141 504.6 399 66.4
Rhsim06G0241600 Rhododendron simsii HOM05D004277 ORTHO05D005148 7.5e-141 504.6 414 65.2
Sabra07G0053700 Salix brachista HOM05D004277 ORTHO05D005148 2.2e-140 503.1 399 66.2
Gohir.D08G252532 Gossypium hirsutum HOM05D004277 ORTHO05D005148 1.1e-139 500.7 392 66.8
vmacro11705 Vaccinium macrocarpon HOM05D004277 ORTHO05D005148 1.1e-139 500.7 417 64.0
TAR626G1109 Trochodendron aralioides HOM05D004277 ORTHO05D005148 1.8e-139 500.0 400 65.0
Gohir.A08G232300 Gossypium hirsutum HOM05D004277 ORTHO05D005148 4.1e-139 498.8 392 66.3
Gorai.004G269300 Gossypium raimondii HOM05D004277 ORTHO05D005148 2.0e-138 496.5 392 66.3
Actinidia12771 Actinidia chinensis HOM05D004277 ORTHO05D005148 1.7e-137 493.4 409 64.3
Lj2A15G78 Lonicera japonica HOM05D004277 ORTHO05D005148 1.5e-136 490.3 413 63.4
MELO3C012612.2 Cucumis melo HOM05D004277 ORTHO05D005148 2.5e-136 489.6 391 64.5
CsaV3_7G022870 Cucumis sativus L. HOM05D004277 ORTHO05D005148 4.2e-136 488.8 391 64.2
CANSAT80G1893 Cannabis sativa HOM05D004277 ORTHO05D005148 2.7e-135 486.1 399 64.4
Oeu019710.1 Olea europaea HOM05D004277 ORTHO05D005148 5.2e-134 481.9 411 60.8
Ca_12380_v3 Cicer arietinum L. HOM05D004277 ORTHO05D005148 1.3e-132 477.2 386 64.5
Ca_12388_v3 Cicer arietinum L. HOM05D004277 ORTHO05D005148 1.3e-132 477.2 386 64.5
Eucgr.F04450 Eucalyptus grandis HOM05D004277 ORTHO05D005148 1.3e-132 477.2 412 61.2
Aqoxy7G03893 Aquilegia oxysepala HOM05D004277 ORTHO05D005148 1.8e-131 473.4 414 60.4
Medtr1g038850 Medicago truncatula HOM05D004277 ORTHO05D005148 2.0e-130 469.9 386 62.2
Psat6g100160 Pisum sativum HOM05D004277 ORTHO05D005148 7.7e-130 468.0 385 62.9
Sed0006880 Sechium edule HOM05D004277 ORTHO05D005148 1.3e-129 467.2 390 61.8
Lj2g0013005 Lotus japonicus HOM05D004277 ORTHO05D005148 6.6e-129 464.9 385 63.1
Thhalv10018016m.g Eutrema salsugineum HOM05D004277 ORTHO05D005148 1.5e-128 463.8 402 62.4
PGR031G1415 Punica granatum HOM05D004277 ORTHO05D005148 5.5e-128 461.8 399 62.9
TWI38G1370 Tripterygium wilfordii HOM05D004277 ORTHO05D005148 7.2e-128 461.5 401 60.8
Glyma.09G284900 Glycine max HOM05D004277 ORTHO05D005148 9.5e-128 461.1 385 62.6
Nn3g21002 Nelumbo nucifera HOM05D004277 ORTHO05D005148 1.2e-127 460.7 409 59.4
THA.LOC104812364 Tarenaya hassleriana HOM05D004277 ORTHO05D005148 6.1e-127 458.4 400 60.8
Lalb_Chr18g0046601 Lupinus albus HOM05D004277 ORTHO05D005148 3.0e-126 456.1 385 62.1
VMungo0251G3136 Vigna mungo HOM05D004277 ORTHO05D005148 5.2e-126 455.3 385 62.3
A02p22660 Brassica napus HOM05D004277 ORTHO05D005148 1.2e-125 454.1 398 62.6
Peaxi162Scf00006g01510 Petunia axillaris HOM05D004277 ORTHO05D005148 1.5e-125 453.8 400 59.8
AT1G79190 Arabidopsis thaliana HOM05D004277 ORTHO05D005148 9.8e-125 451.1 398 61.3
BcaB05g25178 Brassica carinata HOM05D004277 ORTHO05D005148 9.8e-125 451.1 399 61.2
Phvul.003G002100 Phaseolus vulgaris HOM05D004277 ORTHO05D005148 1.3e-124 450.7 385 62.3
Aa31LG4G1820 Aethionema arabicum HOM05D004277 ORTHO05D005148 3.7e-124 449.1 399 59.1
Sp5g34240 Schrenkiella parvula HOM05D004277 ORTHO05D005148 3.7e-124 449.1 405 60.7
Peaxi162Scf00078g01336 Petunia axillaris HOM05D004277 ORTHO05D005148 4.9e-124 448.7 414 59.2
CARHR072840 Cardamine hirsuta HOM05D004277 ORTHO05D005148 1.1e-123 447.6 404 60.1
Carub.0002s2606 Capsella rubella HOM05D004277 ORTHO05D005148 1.4e-123 447.2 399 60.4
DCAR_019921 Daucus carota HOM05D004277 ORTHO05D005148 1.4e-123 447.2 403 60.0
BcaC03g15873 Brassica carinata HOM05D004277 ORTHO05D005148 1.8e-123 446.8 399 62.4
BolC2t09641H Brassica oleracea HOM05D004277 ORTHO05D005148 1.8e-123 446.8 399 62.4
AL2G39660 Arabidopsis lyrata HOM05D004277 ORTHO05D005148 4.1e-123 445.7 399 61.2
BraA02t07267Z Brassica rapa HOM05D004277 ORTHO05D005148 4.1e-123 445.7 399 62.4
ClCG09G022670 Citrullus lanatus HOM05D004277 ORTHO05D005148 4.1e-123 445.7 442 55.4
Cc05_g16300 Coffea canephora HOM05D004277 ORTHO05D005148 4.5e-122 442.2 400 59.0
PSO210G0403 Papaver somniferum HOM05D004277 ORTHO05D005148 2.9e-121 439.5 410 57.8
C02p36270 Brassica napus HOM05D004277 ORTHO05D005148 3.8e-121 439.1 403 61.3
SalBow7G4120 Salvia bowleyana HOM05D004277 ORTHO05D005148 1.9e-120 436.8 412 57.3
Solyc12g017280.2 Solanum lycopersicum HOM05D004277 ORTHO05D005148 1.6e-119 433.7 412 56.6
MBI02_g15959_MAGBIO Magnolia biondii HOM05D004277 ORTHO05D005148 3.6e-119 432.6 386 59.8
PSO210G1337 Papaver somniferum HOM05D004277 ORTHO05D005148 3.6e-119 432.6 408 56.9
HanXRQChr03g0078241 Helianthus annuus HOM05D004277 ORTHO05D005148 1.4e-118 430.6 389 57.1
Sopen12g008110 Solanum pennellii HOM05D004277 ORTHO05D005148 1.4e-118 430.6 412 55.3
EL10Ac2g03265 Beta vulgaris HOM05D004277 ORTHO05D005148 1.8e-118 430.3 397 57.2
ECA240G2290 Erigeron canadensis HOM05D004277 ORTHO05D005148 8.9e-118 427.9 386 57.5
Migut.H01674 Erythranthe guttata HOM05D004277 ORTHO05D005148 2.6e-117 426.4 395 56.7
SGA_v2.0_scaffold239G44031 Striga asiatica HOM05D004277 ORTHO05D005148 5.8e-117 425.2 412 54.4
AUR62006227 Chenopodium quinoa HOM05D004277 ORTHO05D005148 9.2e-115 417.9 404 55.7
AUR62036983 Chenopodium quinoa HOM05D004277 ORTHO05D005148 1.2e-114 417.5 404 55.2
arahy.Tifrunner.gnm1.ann1.3DGA3E Arachis hypogaea HOM05D004277 ORTHO05D005148 7.8e-114 414.8 405 56.5
arahy.Tifrunner.gnm1.ann1.J7P8I0 Arachis hypogaea HOM05D004277 ORTHO05D005148 1.0e-113 414.5 385 58.2
Nitab4.5_0000388g0130 Nicotiana tabacum HOM05D004277 ORTHO05D005148 1.7e-113 413.7 393 57.8
Ah.02g131470 Amaranthus hybridus HOM05D004277 ORTHO05D005148 3.3e-112 409.5 393 55.2
Lsat_1_v5_gn_7_70840 Lactuca sativa HOM05D004277 ORTHO05D005148 6.8e-110 401.7 389 55.8
unitig_8.g4753 Utricularia gibba HOM05D004277 ORTHO05D005148 4.4e-109 399.1 397 52.4
Sc06g0002790 Simmondsia chinensis HOM05D004277 ORTHO05D005148 9.2e-107 391.3 398 54.0
Hma1.2p1_1054F.1_g252470 Hydrangea macrophylla HOM05D004277 ORTHO05D005148 4.6e-106 389.0 350 60.3
HPP92_021082 Vanilla planifolia HOM05D004277 ORTHO05D005148 4.7e-103 379.0 403 52.4
ATR0763G037 Amborella trichopoda HOM05D004277 ORTHO05D005148 1.8e-102 377.1 412 50.7
Nitab4.5_0009962g0020 Nicotiana tabacum HOM05D004277 ORTHO05D005148 4.0e-94 349.4 268 66.8
Zm00001eb224850 Zea mays HOM05D004277 ORTHO05D005148 1.7e-89 334.0 400 47.5
MD05G1224300 Malus domestica HOM05D004277 ORTHO05D005148 1.3e-60 238.0 147 76.2
MD10G1205800 Malus domestica HOM05D004277 ORTHO05D005148 1.8e-57 227.6 232 56.9
TAR624G0115 Trochodendron aralioides HOM05D004277 ORTHO05D005148 2.9e-52 210.3 191 60.7
SEGI_00999 Sequoiadendron giganteum HOM05D004277 ORTHO05D005148 1.4e-51 208.0 268 45.1
TPR.G40005 Trifolium pratense HOM05D004277 ORTHO05D005148 5.9e-45 186.0 140 66.4
BcaB02g08672 Brassica carinata HOM05D004277 ORTHO05D005148 5.5e-43 179.5 170 57.6
Pp3c22_19900 Physcomitrium patens HOM05D004277 ORTHO05D005148 1.4e-38 164.9 396 30.3
CDE05G2591 Ceratophyllum demersum HOM05D004277 ORTHO05D005148 1.2e-34 151.8 216 42.6
Mapoly0151s0022 Marchantia polymorpha HOM05D004277 ORTHO05D005148 4.8e-31 139.8 399 29.6
Zm00001eb060300 Zea mays HOM05D004277 ORTHO05D005148 4.1e-30 136.7 140 52.1
CDE05G3501 Ceratophyllum demersum HOM05D003316 ORTHO05D003690 1.0e-25 122.1 97 63.9
MD10G1205600 Malus domestica HOM05D004277 ORTHO05D005148 1.8e-17 94.7 61 70.5
CBR_g39747 Chara braunii HOM05D004277 ORTHO05D005148 1.3e-12 78.6 335 26.6
Cre01.g039600 Chlamydomonas reinhardtii HOM05D004277 ORTHO05D005148 1.5e-08 65.1 292 24.0


User provided reference genes

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