Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc33.79 Carica papaya HOM05D006855 ORTHO05D008695 2.1e-140 502.3 246 100.0
Glyma.11G244400 Glycine max HOM05D006855 ORTHO05D008695 1.8e-67 260.0 182 67.6
Phvul.001G256400 Phaseolus vulgaris HOM05D006855 ORTHO05D008695 2.0e-66 256.5 178 69.1
TWI75G0344 Tripterygium wilfordii HOM05D006855 ORTHO05D008695 3.5e-66 255.8 179 67.0
TAR629G1507 Trochodendron aralioides HOM05D006855 ORTHO05D008695 3.8e-65 252.3 183 64.5
Nn3g16630 Nelumbo nucifera HOM05D006855 ORTHO05D008695 1.9e-64 250.0 231 53.2
Ciclev10031545m.g Citrus clementina HOM05D006855 ORTHO05D008695 3.3e-64 249.2 178 68.0
COL.COLO4_23530 Corchorus olitorius HOM05D006855 ORTHO05D008695 3.3e-64 249.2 179 67.6
Lj6g0028045 Lotus japonicus HOM05D006855 ORTHO05D008695 4.3e-64 248.8 178 66.3
CiPaw.05G176800 Carya illinoinensis HOM05D006855 ORTHO05D008695 5.6e-64 248.4 180 66.1
Duzib248G0606 Durio zibethinus HOM05D006855 ORTHO05D008695 5.6e-64 248.4 180 65.6
TPR.G5676 Trifolium pratense HOM05D006855 ORTHO05D008695 5.6e-64 248.4 178 66.9
arahy.Tifrunner.gnm1.ann1.FYV5AX Arachis hypogaea HOM05D006855 ORTHO05D008695 1.2e-63 247.3 178 65.7
ClCG05G026110 Citrullus lanatus HOM05D006855 ORTHO05D008695 1.2e-63 247.3 182 64.8
GSVIVG01000584001 Vitis vinifera HOM05D006855 ORTHO05D008695 1.2e-63 247.3 178 67.4
Prupe.1G240700 Prunus persica HOM05D006855 ORTHO05D008695 1.6e-63 246.9 178 66.9
Lalb_Chr11g0075551 Lupinus albus HOM05D006855 ORTHO05D008695 2.1e-63 246.5 178 66.3
MD13G1105700 Malus domestica HOM05D006855 ORTHO05D008695 4.7e-63 245.4 178 66.3
Psat5g092640 Pisum sativum HOM05D006855 ORTHO05D008695 4.7e-63 245.4 178 65.2
Medtr3g086360 Medicago truncatula HOM05D006855 ORTHO05D008695 6.1e-63 245.0 232 54.3
Aqoxy3G00656 Aquilegia oxysepala HOM05D006855 ORTHO05D008695 8.0e-63 244.6 183 63.9
Aqoxy3G01366 Aquilegia oxysepala HOM05D006855 ORTHO05D008695 8.0e-63 244.6 183 63.9
Actinidia15119 Actinidia chinensis HOM05D006855 ORTHO05D008695 1.4e-62 243.8 185 63.2
Haze_12292 Corylus avellana HOM05D006855 ORTHO05D008695 1.4e-62 243.8 197 64.0
Thecc.02G266900 Theobroma cacao HOM05D006855 ORTHO05D008695 5.2e-62 241.9 177 65.5
Atru.chr11.2187 Acer truncatum HOM05D006855 ORTHO05D008695 6.8e-62 241.5 178 66.3
FAN17G2133 Fragaria x ananassa HOM05D006855 ORTHO05D008695 8.9e-62 241.1 180 66.7
RcHm_v2.0_Chr4g0432431 Rosa chinensis HOM05D006855 ORTHO05D008695 8.9e-62 241.1 180 66.1
MELO3C011916.2 Cucumis melo HOM05D006855 ORTHO05D008695 1.5e-61 240.4 180 65.0
Gohir.D12G150600 Gossypium hirsutum HOM05D006855 ORTHO05D008695 2.6e-61 239.6 177 66.1
CSS0027349 Camellia sinensis var. sinensis HOM05D006855 ORTHO05D008695 4.4e-61 238.8 294 45.6
Ca_25129_v3 Cicer arietinum L. HOM05D006855 ORTHO05D008695 4.4e-61 238.8 173 64.7
Potri.010G051200 Populus trichocarpa HOM05D006855 ORTHO05D008695 5.7e-61 238.4 182 64.8
CsaV3_5G030740 Cucumis sativus L. HOM05D006855 ORTHO05D008695 7.5e-61 238.0 180 64.4
FAN12G0810 Fragaria x ananassa HOM05D006855 ORTHO05D008695 7.5e-61 238.0 180 66.1
Gorai.008G162100 Gossypium raimondii HOM05D006855 ORTHO05D008695 7.5e-61 238.0 177 66.1
Dinv14753 Davidia involucrata HOM05D006855 ORTHO05D008695 9.8e-61 237.7 178 66.3
CANSAT01G1415 Cannabis sativa HOM05D006855 ORTHO05D008695 1.3e-60 237.3 179 64.2
Eucgr.H02451 Eucalyptus grandis HOM05D006855 ORTHO05D008695 1.7e-60 236.9 178 64.6
CSS0002421 Camellia sinensis var. sinensis HOM05D006855 ORTHO05D008695 2.9e-60 236.1 217 56.7
Manes.12G019600 Manihot esculenta HOM05D006855 ORTHO05D008695 2.9e-60 236.1 178 65.7
FAN22G2334 Fragaria x ananassa HOM05D006855 ORTHO05D008695 1.4e-59 233.8 180 65.6
PSO210G7557 Papaver somniferum HOM05D006855 ORTHO05D008695 1.4e-59 233.8 181 62.4
ATR0796G133 Amborella trichopoda HOM05D006855 ORTHO05D008695 4.1e-59 232.3 181 63.0
VMungo1383G3215 Vigna mungo HOM05D000933 ORTHO05D000820 5.4e-59 231.9 168 66.7
Cc11_g16140 Coffea canephora HOM05D006855 ORTHO05D008695 1.2e-58 230.7 178 64.6
Gohir.A12G146000 Gossypium hirsutum HOM05D006855 ORTHO05D008695 1.6e-58 230.3 171 65.5
PSO478G2928 Papaver somniferum HOM05D006855 ORTHO05D008695 2.0e-58 229.9 181 61.3
Lsat_1_v5_gn_8_153661 Lactuca sativa HOM05D006855 ORTHO05D008695 3.5e-58 229.2 174 64.4
THA.LOC104825678 Tarenaya hassleriana HOM05D006855 ORTHO05D008695 4.6e-58 228.8 178 60.7
C07p35130 Brassica napus HOM05D006855 ORTHO05D008695 5.9e-58 228.4 179 62.6
PGR083G2447 Punica granatum HOM05D006855 ORTHO05D008695 1.3e-57 227.3 178 62.4
AUR62005523 Chenopodium quinoa HOM05D006855 ORTHO05D008695 2.3e-57 226.5 178 61.8
Sed0018660 Sechium edule HOM05D006855 ORTHO05D008695 5.0e-57 225.3 183 61.2
HanXRQChr12g0371791 Helianthus annuus HOM05D006855 ORTHO05D008695 6.6e-57 224.9 174 63.2
Aa31LG2G6230 Aethionema arabicum HOM05D006855 ORTHO05D008695 8.6e-57 224.6 179 60.9
AUR62024216 Chenopodium quinoa HOM05D006855 ORTHO05D008695 1.5e-56 223.8 178 60.7
BcaC06g33927 Brassica carinata HOM05D006855 ORTHO05D008695 2.5e-56 223.0 179 60.3
BolC7t44041H Brassica oleracea HOM05D006855 ORTHO05D008695 2.5e-56 223.0 179 60.3
CAN.G379.20 Capsicum annuum HOM05D006855 ORTHO05D008695 2.5e-56 223.0 181 58.6
FAN07G2733 Fragaria x ananassa HOM05D006855 ORTHO05D008695 2.5e-56 223.0 170 65.3
Nitab4.5_0015117g0010 Nicotiana tabacum HOM05D006855 ORTHO05D008695 4.3e-56 222.2 177 61.0
Carub.0005s0400 Capsella rubella HOM05D006855 ORTHO05D008695 7.3e-56 221.5 216 54.2
vmacro16160 Vaccinium macrocarpon HOM05D006855 ORTHO05D008695 7.3e-56 221.5 200 54.5
MSTRG.548 Avicennia marina HOM05D006855 ORTHO05D008695 1.2e-55 220.7 174 60.3
Ah.02g130370 Amaranthus hybridus HOM05D006855 ORTHO05D008695 1.6e-55 220.3 179 60.3
Thhalv10004274m.g Eutrema salsugineum HOM05D006855 ORTHO05D008695 1.6e-55 220.3 177 61.6
Sopen01g004390 Solanum pennellii HOM05D006855 ORTHO05D008695 2.8e-55 219.5 174 60.9
A06p42230 Brassica napus HOM05D006855 ORTHO05D008695 1.0e-54 217.6 174 60.9
BraA06t27139Z Brassica rapa HOM05D006855 ORTHO05D008695 1.0e-54 217.6 174 60.9
Sp2g15320 Schrenkiella parvula HOM05D006855 ORTHO05D008695 1.8e-54 216.9 178 61.8
CARHR147120 Cardamine hirsuta HOM05D006855 ORTHO05D008695 2.3e-54 216.5 177 60.5
AL5G14830 Arabidopsis lyrata HOM05D006855 ORTHO05D008695 5.2e-54 215.3 178 60.1
Solyc01g008900.4 Solanum lycopersicum HOM05D006855 ORTHO05D008695 6.8e-54 214.9 174 59.8
Peaxi162Scf00050g00819 Petunia axillaris HOM05D006855 ORTHO05D008695 8.9e-54 214.5 174 59.2
PGSC0003DMG400022710 Solanum tuberosum HOM05D006855 ORTHO05D008695 1.2e-53 214.2 174 59.8
Migut.K00633 Erythranthe guttata HOM05D006855 ORTHO05D008695 1.5e-53 213.8 174 59.2
BcaC06g31090 Brassica carinata HOM05D006855 ORTHO05D008695 1.3e-52 210.7 177 60.5
CDE02G0600 Ceratophyllum demersum HOM05D006855 ORTHO05D008695 3.2e-51 206.1 175 58.3
SEGI_08498 Sequoiadendron giganteum HOM05D006855 ORTHO05D008695 5.4e-51 205.3 174 56.9
FAN14G3171 Fragaria x ananassa HOM05D006855 ORTHO05D008695 1.3e-49 200.7 150 65.3
SGA_v2.0_scaffold100G29585 Striga asiatica HOM05D006855 ORTHO05D008695 1.7e-49 200.3 172 57.0
SalBow2G0666 Salvia bowleyana HOM05D006855 ORTHO05D008695 6.6e-49 198.4 187 57.2
ECA233G5842 Erigeron canadensis HOM05D000068 ORTHO05D000084 2.5e-48 196.4 161 64.0
FAN18G3688 Fragaria x ananassa HOM05D006855 ORTHO05D008695 2.1e-47 193.4 147 64.6
Lj3A1062T101 Lonicera japonica HOM05D006855 ORTHO05D008695 2.8e-47 193.0 174 56.3
Carub.0005s0511 Capsella rubella HOM05D006855 ORTHO05D008695 3.6e-47 192.6 176 58.5
QL03p056162 Quercus lobata HOM05D006855 ORTHO05D008695 4.7e-47 192.2 134 67.2
Zm00001eb155910 Zea mays HOM05D006855 ORTHO05D008695 8.1e-47 191.4 175 56.6
FAN08G3042 Fragaria x ananassa HOM05D006855 ORTHO05D008695 4.0e-46 189.1 142 64.8
HPP92_023148 Vanilla planifolia HOM05D006855 ORTHO05D008695 6.8e-46 188.3 175 52.6
EL10As2g23185 Beta vulgaris HOM05D006855 ORTHO05D008695 2.6e-45 186.4 178 53.9
Os01g0695600 Oryza sativa ssp. japonica HOM05D006855 ORTHO05D008695 1.3e-44 184.1 177 57.1
Mapoly0058s0079 Marchantia polymorpha HOM05D006855 ORTHO05D008695 2.3e-41 173.3 174 52.3
Pp3c22_21870 Physcomitrium patens HOM05D006855 ORTHO05D008695 3.6e-39 166.0 171 49.1
SMO203G0085 Selaginella moellendorffii HOM05D006855 ORTHO05D008695 1.5e-32 144.1 204 41.7
unitig_699.g19941 Utricularia gibba HOM05D002671 ORTHO05D001380 2.5e-32 143.3 161 46.6
Nitab4.5_0000718g0180 Nicotiana tabacum HOM05D006855 ORTHO05D008695 4.3e-32 142.5 178 44.4
FAN15G2953 Fragaria x ananassa HOM05D006855 ORTHO05D008695 2.4e-30 136.7 103 63.1
arahy.Tifrunner.gnm1.ann1.74BAAJ Arachis hypogaea HOM05D006855 ORTHO05D008695 6.9e-30 135.2 113 58.4
FAN23G2199 Fragaria x ananassa HOM05D006855 ORTHO05D008695 1.5e-29 134.0 103 62.1
MBI19_g16323_MAGBIO Magnolia biondii HOM05D006855 ORTHO05D008695 3.5e-26 122.9 104 59.6
AT3G26115 Arabidopsis thaliana HOM05D006855 ORTHO05D008695 5.1e-25 119.0 104 54.8
CSS0015338 Camellia sinensis var. sinensis HOM05D006855 ORTHO05D008695 2.5e-24 116.7 107 51.4
CSS0040008 Camellia sinensis var. sinensis HOM05D006855 ORTHO05D008695 1.6e-23 114.0 122 46.7
SMO327G0033 Selaginella moellendorffii HOM05D006855 ORTHO05D008695 5.3e-22 109.0 168 38.7
Cre01.g031850 Chlamydomonas reinhardtii HOM05D006855 ORTHO05D008695 4.6e-18 95.9 205 30.7
SMO203G0059 Selaginella moellendorffii HOM05D006855 ORTHO05D008695 3.9e-17 92.8 131 40.5
SMO327G0043 Selaginella moellendorffii HOM05D006855 ORTHO05D008695 2.9e-12 76.6 143 35.0
VMungo1383G3417 Vigna mungo HOM05D006350 ORTHO05D007850 4.6e-10 69.3 66 51.5
QL03p056156 Quercus lobata HOM05D006855 ORTHO05D008695 3.9e-09 66.2 45 68.9
Hund25410 Selenicereus undatus HOM05D006855 ORTHO05D008695 6.7e-09 65.5 49 59.2
ECA233G3820 Erigeron canadensis HOM05D006855 ORTHO05D008695 8.7e-09 65.1 44 65.9
Sc11g0000830 Simmondsia chinensis HOM05D006855 ORTHO05D008695 1.5e-08 64.3 43 69.8
FvH4_4g25240 Fragaria vesca HOM05D006855 ORTHO05D008695 4.8e-07 59.3 40 72.5
PGSC0003DMG400031041 Solanum tuberosum HOM05D005071 ORTHO05D006069 3.1e-06 56.6 182 24.2
SMO203G0223 Selaginella moellendorffii HOM05D006855 ORTHO05D008695 4.0e-06 56.2 112 33.0
SEGI_15055 Sequoiadendron giganteum HOM05D006855 ORTHO05D008695 9.0e-06 55.1 44 61.4


User provided reference genes

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