Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc33.4 Carica papaya HOM05D005895 ORTHO05D007916 0.0e+00 1189.5 603 100.0
Atru.chr11.2133 Acer truncatum HOM05D005895 ORTHO05D007916 1.3e-268 929.5 582 82.0
Cfa009199 Carpinus fangiana HOM05D005895 ORTHO05D007916 1.7e-268 929.1 581 80.7
Haze_12237 Corylus avellana HOM05D005895 ORTHO05D007916 3.0e-268 928.3 581 80.6
Atru.chr11.2117 Acer truncatum HOM05D005895 ORTHO05D007916 5.0e-268 927.5 582 81.8
Thecc.02G257400 Theobroma cacao HOM05D005895 ORTHO05D007916 2.3e-265 918.7 581 80.0
GSVIVG01004086001 Vitis vinifera HOM05D005895 ORTHO05D007916 2.0e-264 915.6 582 78.4
Ciclev10030909m.g Citrus clementina HOM05D005895 ORTHO05D007916 2.2e-263 912.1 581 80.0
QL03p058522 Quercus lobata HOM05D005895 ORTHO05D007916 3.7e-263 911.4 587 78.2
Gohir.A04G136400 Gossypium hirsutum HOM05D005895 ORTHO05D007916 6.4e-263 910.6 536 83.0
COL.COLO4_24246 Corchorus olitorius HOM05D005895 ORTHO05D007916 8.3e-263 910.2 583 80.1
CSS0018548 Camellia sinensis var. sinensis HOM05D005895 ORTHO05D007916 7.0e-262 907.1 584 78.8
PGR119G2505 Punica granatum HOM05D005895 ORTHO05D007916 7.0e-262 907.1 581 79.7
THA.LOC104822982 Tarenaya hassleriana HOM05D005895 ORTHO05D007916 1.6e-261 906.0 582 78.7
TAR371G0306 Trochodendron aralioides HOM05D005895 ORTHO05D007916 4.6e-261 904.4 584 78.6
CiPaw.05G183400 Carya illinoinensis HOM05D005895 ORTHO05D007916 1.0e-260 903.3 581 79.0
Gorai.012G172600 Gossypium raimondii HOM05D005895 ORTHO05D007916 1.0e-260 903.3 536 82.5
Sp5g25720 Schrenkiella parvula HOM05D005895 ORTHO05D007916 2.3e-260 902.1 585 77.8
Gohir.D04G179500 Gossypium hirsutum HOM05D005895 ORTHO05D007916 8.6e-260 900.2 529 83.4
CANSAT01G2589 Cannabis sativa HOM05D005895 ORTHO05D007916 4.3e-259 897.9 584 77.7
AT1G70570 Arabidopsis thaliana HOM05D005895 ORTHO05D007916 5.6e-259 897.5 584 77.7
Prupe.1G247400 Prunus persica HOM05D005895 ORTHO05D007916 1.6e-258 896.0 585 78.1
Potri.010G044900 Populus trichocarpa HOM05D005895 ORTHO05D007916 2.8e-258 895.2 581 78.8
TWI36G0590 Tripterygium wilfordii HOM05D005895 ORTHO05D007916 4.7e-258 894.4 582 78.7
MELO3C011963.2 Cucumis melo HOM05D005895 ORTHO05D007916 6.2e-258 894.0 581 77.8
Actinidia27801 Actinidia chinensis HOM05D005895 ORTHO05D007916 8.1e-258 893.6 581 78.1
Carub.0002s1729 Capsella rubella HOM05D005895 ORTHO05D007916 1.1e-257 893.3 584 77.6
AL2G29960 Arabidopsis lyrata HOM05D005895 ORTHO05D007916 1.4e-257 892.9 585 76.9
CARHR063780 Cardamine hirsuta HOM05D005895 ORTHO05D007916 2.0e-256 889.0 582 77.1
Sabra10G0023200 Salix brachista HOM05D005895 ORTHO05D007916 1.3e-255 886.3 595 76.1
CsaV3_5G031240 Cucumis sativus L. HOM05D005895 ORTHO05D007916 1.4e-254 882.9 581 76.6
TPR.G34672 Trifolium pratense HOM05D005895 ORTHO05D007916 3.2e-254 881.7 582 75.8
Sed0023548 Sechium edule HOM05D005895 ORTHO05D007916 5.4e-254 880.9 581 76.9
Eucgr.H02516 Eucalyptus grandis HOM05D005895 ORTHO05D007916 7.1e-254 880.6 526 82.3
RcHm_v2.0_Chr4g0433361 Rosa chinensis HOM05D005895 ORTHO05D007916 2.1e-253 879.0 583 76.8
BcaB05g24593 Brassica carinata HOM05D005895 ORTHO05D007916 3.5e-253 878.2 584 76.9
A02p16660 Brassica napus HOM05D005895 ORTHO05D007916 6.0e-253 877.5 587 76.8
Thhalv10018314m.g Eutrema salsugineum HOM05D005895 ORTHO05D007916 6.0e-253 877.5 585 76.2
BraA02t06722Z Brassica rapa HOM05D005895 ORTHO05D007916 1.7e-252 875.9 587 76.5
MBI10_g00734_MAGBIO Magnolia biondii HOM05D005895 ORTHO05D007916 2.3e-252 875.5 583 75.8
Medtr8g069525 Medicago truncatula HOM05D005895 ORTHO05D007916 3.0e-252 875.2 576 75.9
Lj6A811T72 Lonicera japonica HOM05D005895 ORTHO05D007916 1.9e-251 872.5 581 75.2
MD13G1098000 Malus domestica HOM05D005895 ORTHO05D007916 4.3e-251 871.3 585 75.7
Gorai.005G179700 Gossypium raimondii HOM05D005895 ORTHO05D007916 1.6e-250 869.4 524 82.6
BcaC03g15207 Brassica carinata HOM05D005895 ORTHO05D007916 2.8e-250 868.6 587 75.8
C02p27920 Brassica napus HOM05D005895 ORTHO05D007916 4.7e-250 867.8 586 75.8
BolC2t08837H Brassica oleracea HOM05D005895 ORTHO05D007916 4.7e-250 867.8 586 75.8
MD16G1098900 Malus domestica HOM05D005895 ORTHO05D007916 1.8e-249 865.9 587 74.8
FvH4_4g25910 Fragaria vesca HOM05D005895 ORTHO05D007916 3.1e-249 865.1 537 80.6
Aa31LG4G10380 Aethionema arabicum HOM05D005895 ORTHO05D007916 4.0e-249 864.8 584 75.2
Glyma.08G283100 Glycine max HOM05D005895 ORTHO05D007916 1.5e-248 862.8 580 75.5
DCAR_007061 Daucus carota HOM05D005895 ORTHO05D007916 3.4e-248 861.7 581 74.4
vmacro01130 Vaccinium macrocarpon HOM05D005895 ORTHO05D007916 4.4e-248 861.3 621 72.5
Solyc04g025540.3 Solanum lycopersicum HOM05D005895 ORTHO05D007916 1.3e-247 859.8 526 80.2
FAN07G1086 Fragaria x ananassa HOM05D005895 ORTHO05D007916 2.9e-247 858.6 537 80.3
Sc04g0009430 Simmondsia chinensis HOM05D005895 ORTHO05D007916 1.1e-246 856.7 575 75.3
Hund06020 Selenicereus undatus HOM05D005895 ORTHO05D007916 2.4e-246 855.5 589 73.2
CAN.G7.20 Capsicum annuum HOM05D005895 ORTHO05D007916 5.4e-246 854.4 550 77.5
FAN12G2739 Fragaria x ananassa HOM05D005895 ORTHO05D007916 9.2e-246 853.6 537 79.9
Sopen04g012770 Solanum pennellii HOM05D005895 ORTHO05D007916 9.2e-246 853.6 526 79.7
FAN12G1268 Fragaria x ananassa HOM05D005895 ORTHO05D007916 2.1e-245 852.4 537 79.9
SalBow8G2958 Salvia bowleyana HOM05D005895 ORTHO05D007916 2.3e-244 849.0 579 72.5
arahy.Tifrunner.gnm1.ann1.LQ91H7 Arachis hypogaea HOM05D005895 ORTHO05D007916 3.9e-244 848.2 583 74.1
FAN17G0264 Fragaria x ananassa HOM05D005895 ORTHO05D007916 5.1e-244 847.8 568 76.1
VMungo0251G0514 Vigna mungo HOM05D005895 ORTHO05D007916 8.7e-244 847.0 579 73.6
Migut.E00194 Erythranthe guttata HOM05D005895 ORTHO05D007916 1.5e-243 846.3 579 74.3
AUR62024296 Chenopodium quinoa HOM05D005895 ORTHO05D007916 9.6e-243 843.6 538 78.4
Lalb_Chr05g0228401 Lupinus albus HOM05D005895 ORTHO05D007916 9.6e-243 843.6 579 73.7
Ah.03g133150 Amaranthus hybridus HOM05D005895 ORTHO05D007916 1.4e-241 839.7 572 73.8
AUR62005446 Chenopodium quinoa HOM05D005895 ORTHO05D007916 2.4e-241 839.0 550 76.5
Lj4g0008127 Lotus japonicus HOM05D005895 ORTHO05D007916 5.3e-241 837.8 581 73.0
Aqoxy5G03807 Aquilegia oxysepala HOM05D005895 ORTHO05D007916 1.5e-240 836.3 559 76.6
EL10Ac6g13787 Beta vulgaris HOM05D005895 ORTHO05D007916 2.6e-240 835.5 610 70.8
ECA233G5390 Erigeron canadensis HOM05D005895 ORTHO05D007916 2.6e-240 835.5 583 72.4
Cc04_g11160 Coffea canephora HOM05D005895 ORTHO05D007916 4.9e-239 831.2 550 75.6
PSO017G6602 Papaver somniferum HOM05D005895 ORTHO05D007916 1.4e-238 829.7 583 73.4
PSO478G2260 Papaver somniferum HOM05D005895 ORTHO05D007916 1.6e-237 826.2 583 73.1
Gohir.D02G159600 Gossypium hirsutum HOM05D005895 ORTHO05D007916 1.8e-233 812.8 516 79.8
HanXRQChr08g0208071 Helianthus annuus HOM05D005895 ORTHO05D007916 1.8e-233 812.8 554 74.5
Manes.12G024300 Manihot esculenta HOM05D005895 ORTHO05D007916 1.8e-233 812.8 518 79.9
FAN22G0931 Fragaria x ananassa HOM05D005895 ORTHO05D007916 5.3e-233 811.2 571 74.1
Nn4g22655 Nelumbo nucifera HOM05D005895 ORTHO05D007916 5.4e-230 801.2 581 71.4
Nitab4.5_0006332g0030 Nicotiana tabacum HOM05D005895 ORTHO05D007916 4.3e-227 791.6 527 75.1
Aqoxy3G01161 Aquilegia oxysepala HOM05D005895 ORTHO05D007916 9.6e-227 790.4 546 72.9
HPP92_003081 Vanilla planifolia HOM05D005895 ORTHO05D007916 9.6e-227 790.4 512 76.8
ClCG05G025660 Citrullus lanatus HOM05D005895 ORTHO05D007916 1.3e-226 790.0 581 71.6
ATR0585G083 Amborella trichopoda HOM05D005895 ORTHO05D007916 3.4e-224 781.9 525 74.7
Manes.13G025800 Manihot esculenta HOM05D005895 ORTHO05D007916 4.5e-224 781.6 522 77.6
Psat0s3772g0040 Pisum sativum HOM05D005895 ORTHO05D007916 4.2e-222 775.0 521 73.7
Ca_22578_v3 Cicer arietinum L. HOM05D005895 ORTHO05D007916 6.7e-220 767.7 521 73.1
Lsat_1_v5_gn_8_150700 Lactuca sativa HOM05D005895 ORTHO05D007916 5.6e-219 764.6 582 68.4
THA.LOC104818151 Tarenaya hassleriana HOM05D005895 ORTHO05D007916 4.8e-218 761.5 496 77.6
Os02g0131200 Oryza sativa ssp. japonica HOM05D005895 ORTHO05D007916 3.1e-217 758.8 540 70.4
Zm00001eb231230 Zea mays HOM05D005895 ORTHO05D007916 5.8e-216 754.6 533 70.7
Nitab4.5_0000370g0030 Nicotiana tabacum HOM05D005895 ORTHO05D007916 7.6e-216 754.2 527 72.1
arahy.Tifrunner.gnm1.ann1.0I87EX Arachis hypogaea HOM05D005895 ORTHO05D007916 2.2e-215 752.7 522 73.4
Phvul.003G063900 Phaseolus vulgaris HOM05D005895 ORTHO05D007916 7.1e-214 747.7 450 80.2
MSTRG.2417 Avicennia marina HOM05D005895 ORTHO05D007916 6.9e-209 731.1 433 81.1
Sed0009772 Sechium edule HOM05D005895 ORTHO05D007916 1.5e-208 729.9 491 75.6
Gohir.A03G136300 Gossypium hirsutum HOM05D005895 ORTHO05D007916 1.4e-206 723.4 494 74.3
Oeu059911.1 Olea europaea HOM05D005895 ORTHO05D007916 1.8e-204 716.5 529 70.9
Duzib251G0200 Durio zibethinus HOM05D005895 ORTHO05D007916 3.9e-204 715.3 581 67.1
unitig_52.g17177 Utricularia gibba HOM05D005895 ORTHO05D007916 2.9e-191 672.5 529 65.8
Mapoly0129s0050 Marchantia polymorpha HOM05D005895 ORTHO05D007916 9.4e-190 667.5 529 64.3
Zm00001eb209010 Zea mays HOM05D005895 ORTHO05D007916 2.4e-185 652.9 539 63.3
Pp3c12_14340 Physcomitrium patens HOM05D005895 ORTHO05D007916 1.6e-184 650.2 492 66.3
Peaxi162Scf01242g00143 Petunia axillaris HOM05D005895 ORTHO05D007916 5.0e-183 645.2 382 81.7
SMO119G0060 Selaginella moellendorffii HOM05D005895 ORTHO05D007916 4.7e-173 612.1 496 63.9
Dinv24803 Davidia involucrata HOM05D005895 ORTHO05D007916 3.5e-168 595.9 388 78.4
AagrBONN_evm.TU.Sc2ySwM_368.1304 Anthoceros agrestis HOM05D005895 ORTHO05D007916 3.4e-163 579.3 447 64.7
Pp3c10_19590 Physcomitrium patens HOM05D005895 ORTHO05D007916 1.4e-121 441.0 324 65.4
SHI17741 Sapria himalayana HOM05D000002 ORTHO05D000001 4.3e-94 349.7 244 72.1
FAN18G3006 Fragaria x ananassa HOM05D005895 ORTHO05D007916 7.2e-89 332.4 200 81.0
CBR_g37586 Chara braunii HOM05D000019 ORTHO05D000048 5.5e-65 253.1 274 50.0
CBR_g37584 Chara braunii HOM05D000019 ORTHO05D000048 4.4e-54 216.9 196 55.1
SEGI_05407 Sequoiadendron giganteum HOM05D005895 ORTHO05D007916 1.8e-52 211.5 141 72.3
Peaxi162Scf02256g00001 Petunia axillaris HOM05D005895 ORTHO05D007916 2.0e-46 191.4 133 70.7
SEGI_24305 Sequoiadendron giganteum HOM05D005895 ORTHO05D007916 2.6e-38 164.5 100 75.0
BcaB08g34808 Brassica carinata HOM05D005895 ORTHO05D007916 6.6e-34 149.8 90 78.9
SEGI_08481 Sequoiadendron giganteum HOM05D005895 ORTHO05D007916 5.8e-30 136.7 91 68.1
DCAR_028023 Daucus carota HOM05D005895 ORTHO05D007916 9.5e-25 119.4 65 84.6
CSS0038190 Camellia sinensis var. sinensis HOM05D033929 ORTHO05D026310 4.0e-23 114.0 119 55.5
Ah.07g201790 Amaranthus hybridus HOM05D005895 ORTHO05D007916 6.8e-23 113.2 66 75.8
SMO163G0072 Selaginella moellendorffii HOM05D005895 ORTHO05D007916 8.9e-23 112.8 148 44.6
A02p16670 Brassica napus HOM05D005895 ORTHO05D012801 1.3e-18 99.0 65 73.8
BraA02t06723Z Brassica rapa HOM05D005895 ORTHO05D012801 1.3e-18 99.0 65 73.8
C02p27930 Brassica napus HOM05D005895 ORTHO05D012801 8.6e-18 96.3 68 70.6
BolC2t08838H Brassica oleracea HOM05D005895 ORTHO05D012801 8.6e-18 96.3 68 70.6
DCAR_029453 Daucus carota HOM05D005895 ORTHO05D007916 2.5e-17 94.7 68 66.2
Rhsim12G0041200 Rhododendron simsii HOM05D005895 ORTHO05D007916 2.5e-17 94.7 64 68.8
BcaB05g24594 Brassica carinata HOM05D005895 ORTHO05D012801 1.2e-16 92.4 99 51.5
Gorai.012G172500 Gossypium raimondii HOM05D005895 ORTHO05D007916 1.4e-15 89.0 54 81.5
Actinidia08142 Actinidia chinensis HOM05D005895 ORTHO05D026310 1.9e-12 78.6 120 47.5
SEGI_38231 Sequoiadendron giganteum HOM05D005895 ORTHO05D007916 4.5e-06 57.4 38 71.1


User provided reference genes

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