Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc33.36 Carica papaya HOM05D006816 ORTHO05D008666 0.0e+00 1130.5 627 100.0
TAR622G0126 Trochodendron aralioides HOM05D006816 ORTHO05D008666 2.9e-210 735.7 544 73.2
Ciclev10030964m.g Citrus clementina HOM05D006816 ORTHO05D008666 5.0e-210 734.9 638 65.8
Thhalv10018280m.g Eutrema salsugineum HOM05D006816 ORTHO05D008666 6.5e-210 734.6 635 65.0
Sp5g22850 Schrenkiella parvula HOM05D006816 ORTHO05D008666 5.5e-209 731.5 632 64.2
BcaB03g15378 Brassica carinata HOM05D006816 ORTHO05D008666 7.2e-209 731.1 626 65.5
BcaC08g46032 Brassica carinata HOM05D006816 ORTHO05D008666 9.4e-209 730.7 626 65.3
C06p38240 Brassica napus HOM05D006816 ORTHO05D008666 9.4e-209 730.7 617 65.3
AL2G26590 Arabidopsis lyrata HOM05D006816 ORTHO05D008666 8.0e-208 727.6 625 65.3
THA.LOC104825556 Tarenaya hassleriana HOM05D006816 ORTHO05D008666 1.4e-207 726.9 628 67.2
AT1G67840 Arabidopsis thaliana HOM05D006816 ORTHO05D008666 1.8e-207 726.5 626 65.3
Carub.0002s1430 Capsella rubella HOM05D006816 ORTHO05D008666 3.0e-207 725.7 632 64.4
Dinv15216 Davidia involucrata HOM05D006816 ORTHO05D008666 3.9e-207 725.3 546 72.7
BolC6t38923H Brassica oleracea HOM05D006816 ORTHO05D008666 1.1e-206 723.8 627 64.4
CARHR060480 Cardamine hirsuta HOM05D006816 ORTHO05D008666 1.5e-206 723.4 543 71.3
Gohir.A03G133700 Gossypium hirsutum HOM05D006816 ORTHO05D008666 2.6e-206 722.6 554 71.1
BraA07t30858Z Brassica rapa HOM05D006816 ORTHO05D008666 3.3e-206 722.2 537 70.9
GSVIVG01000542001 Vitis vinifera HOM05D006816 ORTHO05D008666 1.3e-205 720.3 537 71.9
A07p32350 Brassica napus HOM05D006816 ORTHO05D008666 2.2e-205 719.5 537 70.6
QL03p057598 Quercus lobata HOM05D006816 ORTHO05D008666 5.3e-204 714.9 560 69.8
Gohir.D02G158100 Gossypium hirsutum HOM05D006816 ORTHO05D008666 2.6e-203 712.6 554 69.9
Gorai.005G177300 Gossypium raimondii HOM05D006816 ORTHO05D008666 2.6e-203 712.6 554 69.9
TWI36G0164 Tripterygium wilfordii HOM05D006816 ORTHO05D008666 5.9e-203 711.4 537 70.9
Aa31sc755G30 Aethionema arabicum HOM05D006816 ORTHO05D008666 3.2e-201 705.7 622 63.3
Haze_12261 Corylus avellana HOM05D006816 ORTHO05D008666 6.1e-200 701.4 624 64.1
COL.COLO4_23463 Corchorus olitorius HOM05D006816 ORTHO05D008666 1.8e-199 699.9 585 66.0
FAN17G1412 Fragaria x ananassa HOM05D006816 ORTHO05D008666 1.5e-198 696.8 542 70.5
Lj3C1059T10 Lonicera japonica HOM05D006816 ORTHO05D008666 4.4e-198 695.3 537 70.2
FAN22G0176 Fragaria x ananassa HOM05D006816 ORTHO05D008666 1.8e-196 689.9 542 69.7
Manes.13G022900 Manihot esculenta HOM05D006816 ORTHO05D008666 3.1e-196 689.1 551 68.1
MD13G1099700 Malus domestica HOM05D006816 ORTHO05D008666 3.5e-195 685.6 554 68.8
Eucgr.H02486 Eucalyptus grandis HOM05D006816 ORTHO05D008666 2.5e-193 679.5 573 65.4
HanXRQChr17g0569531 Helianthus annuus HOM05D006816 ORTHO05D008666 8.8e-191 671.0 542 65.3
Atru.chr11.2152 Acer truncatum HOM05D006816 ORTHO05D008666 2.2e-189 666.4 538 68.0
PGSC0003DMG400018598 Solanum tuberosum HOM05D006816 ORTHO05D008666 3.7e-189 665.6 547 66.5
Ah.02g130220 Amaranthus hybridus HOM05D006816 ORTHO05D008666 8.3e-189 664.5 542 66.6
Sopen05g008580 Solanum pennellii HOM05D006816 ORTHO05D008666 3.5e-187 659.1 547 66.4
Oeu057544.1 Olea europaea HOM05D006816 ORTHO05D008666 5.9e-187 658.3 546 65.8
Hund06034 Selenicereus undatus HOM05D006816 ORTHO05D008666 2.3e-186 656.4 538 65.6
Solyc05g013670.3 Solanum lycopersicum HOM05D006816 ORTHO05D008666 2.9e-186 656.0 547 66.2
Nitab4.5_0006963g0030 Nicotiana tabacum HOM05D006816 ORTHO05D008666 3.8e-186 655.6 543 67.0
CsaV3_5G031010 Cucumis sativus L. HOM05D006816 ORTHO05D008666 5.0e-186 655.2 534 65.7
Sed0004203 Sechium edule HOM05D006816 ORTHO05D008666 2.5e-185 652.9 537 65.7
Migut.K00611 Erythranthe guttata HOM05D006816 ORTHO05D008666 4.2e-185 652.1 542 65.7
ECA234G3219 Erigeron canadensis HOM05D006816 ORTHO05D008666 9.5e-185 651.0 533 64.9
PSO063G6228 Papaver somniferum HOM05D006816 ORTHO05D008666 9.5e-185 651.0 549 65.0
Glyma.05G174600 Glycine max HOM05D006816 ORTHO05D008666 1.2e-184 650.6 553 64.4
EL10Ac6g13857 Beta vulgaris HOM05D006816 ORTHO05D008666 4.0e-183 645.6 537 64.2
PSO754G0080 Papaver somniferum HOM05D006816 ORTHO05D008666 5.2e-183 645.2 548 65.0
FvH4_4g25720 Fragaria vesca HOM05D006816 ORTHO05D008666 6.8e-183 644.8 542 66.2
Lalb_Chr07g0185401 Lupinus albus HOM05D006816 ORTHO05D008666 6.8e-183 644.8 556 63.7
Sabra10G0021100 Salix brachista HOM05D006816 ORTHO05D008666 3.4e-182 642.5 556 65.5
AUR62024254 Chenopodium quinoa HOM05D006816 ORTHO05D008666 7.5e-182 641.3 582 61.9
CANSAT01G2021 Cannabis sativa HOM05D006816 ORTHO05D008666 1.3e-181 640.6 536 65.5
VMungo0251G0196 Vigna mungo HOM05D006816 ORTHO05D008666 1.3e-181 640.6 553 63.8
MELO3C011940.2 Cucumis melo HOM05D006816 ORTHO05D008666 1.7e-181 640.2 544 64.0
FAN12G1622 Fragaria x ananassa HOM05D006816 ORTHO05D008666 4.9e-181 638.6 547 66.0
Lsat_1_v5_gn_4_4020 Lactuca sativa HOM05D006816 ORTHO05D008666 8.3e-181 637.9 535 64.3
Medtr8g089810 Medicago truncatula HOM05D006816 ORTHO05D008666 1.1e-180 637.5 548 63.7
Lj4g0008868 Lotus japonicus HOM05D006816 ORTHO05D008666 3.5e-179 632.5 555 62.9
Phvul.002G259600 Phaseolus vulgaris HOM05D006816 ORTHO05D008666 4.6e-179 632.1 558 62.5
Ca_17778_v3 Cicer arietinum L. HOM05D006816 ORTHO05D008666 1.5e-177 627.1 549 63.2
SalBow2G0630 Salvia bowleyana HOM05D006816 ORTHO05D008666 1.6e-176 623.6 629 56.6
TPR.G6183 Trifolium pratense HOM05D006816 ORTHO05D008666 1.4e-175 620.5 548 62.4
PGR119G0117 Punica granatum HOM05D006816 ORTHO05D008666 2.3e-175 619.8 542 63.5
Nn4g22582 Nelumbo nucifera HOM05D006816 ORTHO05D008666 3.1e-175 619.4 543 64.1
RcHm_v2.0_Chr4g0433151 Rosa chinensis HOM05D006816 ORTHO05D008666 8.9e-175 617.8 544 63.8
ClCG05G025840 Citrullus lanatus HOM05D006816 ORTHO05D008666 6.4e-173 611.7 545 63.5
Duzib251G0886 Durio zibethinus HOM05D006816 ORTHO05D008666 3.2e-172 609.4 553 63.3
Cc11_g15850 Coffea canephora HOM05D006816 ORTHO05D008666 7.0e-172 608.2 533 64.2
CSS0008455 Camellia sinensis var. sinensis HOM05D006816 ORTHO05D008666 9.2e-172 607.8 538 64.1
Aqoxy5G03738 Aquilegia oxysepala HOM05D006816 ORTHO05D008666 1.2e-171 607.4 533 61.9
Peaxi162Scf00128g00318 Petunia axillaris HOM05D006816 ORTHO05D008666 5.0e-170 602.1 543 63.2
vmacro01121 Vaccinium macrocarpon HOM05D006816 ORTHO05D008666 3.6e-168 595.9 565 61.1
Psat7g059360 Pisum sativum HOM05D006816 ORTHO05D008666 4.0e-167 592.4 540 60.2
AUR62005487 Chenopodium quinoa HOM05D006816 ORTHO05D008666 1.9e-164 583.6 622 56.1
unitig_699.g19932 Utricularia gibba HOM05D006816 ORTHO05D008666 2.4e-164 583.2 525 61.0
CAN.G436.5 Capsicum annuum HOM05D006816 ORTHO05D008666 8.6e-154 548.1 476 64.1
ATR0824G245 Amborella trichopoda HOM05D006816 ORTHO05D008666 3.3e-153 546.2 543 58.0
Nitab4.5_0000524g0100 Nicotiana tabacum HOM05D006816 ORTHO05D008666 1.2e-152 544.3 458 66.2
Zm00001eb319330 Zea mays HOM05D006816 ORTHO05D008666 2.4e-151 540.0 555 56.0
Actinidia01356 Actinidia chinensis HOM05D006816 ORTHO05D008666 3.9e-146 522.7 468 63.0
Sc11g0000930 Simmondsia chinensis HOM05D006816 ORTHO05D008666 1.8e-143 513.8 473 60.7
DCAR_031163 Daucus carota HOM05D006816 ORTHO05D008666 4.8e-136 489.2 542 53.7
Thecc.02G261900 Theobroma cacao HOM05D006816 ORTHO05D008666 3.1e-127 459.9 378 68.0
SEGI_18687 Sequoiadendron giganteum HOM05D006816 ORTHO05D008666 1.4e-116 424.5 540 47.4
SGA_v2.0_scaffold100G29566 Striga asiatica HOM05D006816 ORTHO05D008666 2.5e-116 423.7 563 46.7
CiPaw.05G180700 Carya illinoinensis HOM05D006816 ORTHO05D008666 1.1e-113 414.8 323 71.8
FAN07G2231 Fragaria x ananassa HOM05D006816 ORTHO05D008666 7.4e-113 412.1 379 63.6
Potri.010G047500 Populus trichocarpa HOM05D006816 ORTHO05D008666 8.2e-112 408.7 369 63.7
arahy.Tifrunner.gnm1.ann1.2HFS1Z Arachis hypogaea HOM05D006816 ORTHO05D008666 3.0e-106 390.2 371 60.4
arahy.Tifrunner.gnm1.ann1.CH9KSW Arachis hypogaea HOM05D006816 ORTHO05D008666 3.3e-105 386.7 371 59.8
Prupe.1G246300 Prunus persica HOM05D006816 ORTHO05D008666 1.7e-104 384.4 375 58.4
HPP92_023364 Vanilla planifolia HOM05D006816 ORTHO05D008666 4.5e-102 376.3 315 63.2
CDE02G3152 Ceratophyllum demersum HOM05D006816 ORTHO05D008666 9.4e-92 342.0 442 47.1
Os12g0292900 Oryza sativa ssp. japonica HOM05D006816 ORTHO05D008666 1.0e-85 322.0 372 51.3
Mapoly0088s0066 Marchantia polymorpha HOM05D006816 ORTHO05D008666 2.1e-75 287.7 570 36.3
MBI17_g43191_MAGBIO Magnolia biondii HOM05D006816 ORTHO05D008666 1.0e-61 242.3 223 61.0
Glyma.08G131850 Glycine max HOM05D006816 ORTHO05D008666 7.8e-54 216.1 176 65.9
Pp3c11_24610 Physcomitrium patens HOM05D006816 ORTHO05D008666 1.5e-49 201.8 537 32.0
Psat3g153200 Pisum sativum HOM05D006816 ORTHO05D008666 3.3e-36 157.5 129 62.0
Psat3g153160 Pisum sativum HOM05D006816 ORTHO05D008517 9.6e-36 156.0 129 61.2
HPP92_023363 Vanilla planifolia HOM05D006816 ORTHO05D008666 8.9e-34 149.4 130 58.5
COL.COLO4_35805 Corchorus olitorius HOM05D006816 ORTHO05D008666 2.0e-33 148.3 97 71.1
CBR_g52389 Chara braunii HOM05D006816 ORTHO05D008666 6.0e-30 136.7 332 29.8
Psat4g077560 Pisum sativum HOM05D006816 ORTHO05D008666 3.9e-29 134.0 95 70.5
Psat2g121560 Pisum sativum HOM05D006816 ORTHO05D008666 1.1e-28 132.5 113 59.3
CDE09G0157 Ceratophyllum demersum HOM05D006816 ORTHO05D008666 1.1e-26 125.9 164 46.3
Actinidia08129 Actinidia chinensis HOM05D006816 ORTHO05D008666 5.1e-21 107.1 116 56.0
Actinidia01355 Actinidia chinensis HOM05D006816 ORTHO05D008666 2.1e-19 101.7 62 77.4
FvH4_4g35670 Fragaria vesca HOM05D006816 ORTHO05D008666 8.4e-16 89.7 59 74.6
FAN22G1065 Fragaria x ananassa HOM05D000247 ORTHO05D000288 1.6e-14 85.5 59 71.2
CBR_g52391 Chara braunii HOM05D006816 ORTHO05D008666 2.5e-12 78.2 187 33.2
MCO12G226 Micromonas commoda HOM05D006816 ORTHO05D008666 3.5e-06 57.8 187 26.7


User provided reference genes

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