Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc33.180 Carica papaya HOM05D005510 ORTHO05D006750 2.1e-252 875.2 436 100.0
Dinv14542 Davidia involucrata HOM05D005510 ORTHO05D006750 2.9e-180 635.6 414 74.4
Atru.chr8.924 Acer truncatum HOM05D005510 ORTHO05D006750 8.6e-177 624.0 410 74.4
Ciclev10011846m.g Citrus clementina HOM05D005510 ORTHO05D006750 1.9e-176 622.9 399 74.9
Potri.006G026100 Populus trichocarpa HOM05D005510 ORTHO05D006750 3.3e-176 622.1 431 70.5
Prupe.7G023400 Prunus persica HOM05D005510 ORTHO05D006750 4.3e-176 621.7 401 74.1
CSS0010239 Camellia sinensis var. sinensis HOM05D005510 ORTHO05D006750 1.5e-173 613.2 399 74.9
Actinidia38200 Actinidia chinensis HOM05D005510 ORTHO05D006750 3.4e-173 612.1 401 74.3
Cfa019896 Carpinus fangiana HOM05D005510 ORTHO05D006750 5.8e-173 611.3 437 69.3
QL07p015480 Quercus lobata HOM05D005510 ORTHO05D006750 7.5e-173 610.9 424 71.0
TWI74G1137 Tripterygium wilfordii HOM05D005510 ORTHO05D006750 3.5e-170 602.1 393 73.8
MBI13_g44207_MAGBIO Magnolia biondii HOM05D005510 ORTHO05D006750 6.0e-170 601.3 434 67.5
GSVIVG01025858001 Vitis vinifera HOM05D005510 ORTHO05D006750 1.3e-169 600.1 434 68.7
RcHm_v2.0_Chr3g0495031 Rosa chinensis HOM05D005510 ORTHO05D006750 1.7e-169 599.7 394 72.6
Rhsim13G0197800 Rhododendron simsii HOM05D005510 ORTHO05D006750 8.6e-169 597.4 395 73.2
Manes.10G072300 Manihot esculenta HOM05D005510 ORTHO05D006750 2.5e-168 595.9 390 72.3
MD14G1100100 Malus domestica HOM05D005510 ORTHO05D006750 5.6e-168 594.7 433 69.5
THA.LOC104803249 Tarenaya hassleriana HOM05D005510 ORTHO05D006750 7.3e-168 594.3 394 72.8
Eucgr.A02173 Eucalyptus grandis HOM05D005510 ORTHO05D006750 1.2e-167 593.6 411 69.3
Medtr6g026730 Medicago truncatula HOM05D005510 ORTHO05D006750 2.1e-167 592.8 389 71.5
Nn7g37230 Nelumbo nucifera HOM05D005510 ORTHO05D006750 3.6e-167 592.0 392 71.4
Hma1.2p1_1327F.1_g275890 Hydrangea macrophylla HOM05D005510 ORTHO05D006750 2.4e-166 589.3 418 68.7
Duzib093G0795 Durio zibethinus HOM05D005510 ORTHO05D006750 3.1e-166 589.0 390 74.6
Glyma.05G079900 Glycine max HOM05D005510 ORTHO05D006750 3.1e-166 589.0 397 69.5
CsaV3_4G029010 Cucumis sativus L. HOM05D005510 ORTHO05D006750 4.0e-166 588.6 432 67.6
PSO384G1661 Papaver somniferum HOM05D005510 ORTHO05D006750 5.2e-166 588.2 416 69.5
FvH4_1g29380 Fragaria vesca HOM05D005510 ORTHO05D006750 6.8e-166 587.8 394 70.8
Ca_04447_v3 Cicer arietinum L. HOM05D002043 ORTHO05D002207 1.5e-165 586.6 416 68.5
Cc06_g18550 Coffea canephora HOM05D005510 ORTHO05D006750 2.6e-165 585.9 413 70.0
MELO3C019166.2 Cucumis melo HOM05D005510 ORTHO05D006750 2.6e-165 585.9 432 67.4
FAN26G2114 Fragaria x ananassa HOM05D005510 ORTHO05D006750 2.6e-165 585.9 394 70.3
Aqoxy3G03066 Aquilegia oxysepala HOM05D005510 ORTHO05D006750 7.6e-165 584.3 391 71.9
Oeu008195.1 Olea europaea HOM05D005510 ORTHO05D006750 2.9e-164 582.4 392 71.7
Aa31LG10G11690 Aethionema arabicum HOM05D005510 ORTHO05D006750 1.1e-163 580.5 427 67.4
Sabra06G0019200 Salix brachista HOM05D005510 ORTHO05D006750 1.1e-163 580.5 459 63.8
AL5G38220 Arabidopsis lyrata HOM05D005510 ORTHO05D006750 1.4e-163 580.1 422 68.0
Lj1C1070G2 Lonicera japonica HOM05D005510 ORTHO05D006750 2.4e-163 579.3 424 68.4
BcaC07g40115 Brassica carinata HOM05D005510 ORTHO05D006750 3.2e-163 578.9 403 70.7
AT3G56840 Arabidopsis thaliana HOM05D005510 ORTHO05D006750 4.2e-163 578.6 421 67.9
Carub.0005s2357 Capsella rubella HOM05D005510 ORTHO05D006750 4.2e-163 578.6 403 70.2
Lalb_Chr02g0157631 Lupinus albus HOM05D005510 ORTHO05D006750 5.4e-163 578.2 458 62.0
Psat1g087480 Pisum sativum HOM05D005510 ORTHO05D006750 5.4e-163 578.2 415 67.5
Thhalv10005964m.g Eutrema salsugineum HOM05D005510 ORTHO05D006750 7.1e-163 577.8 421 68.2
Gorai.002G222700 Gossypium raimondii HOM05D005510 ORTHO05D006750 7.1e-163 577.8 390 73.1
CANSAT11G0391 Cannabis sativa HOM05D005510 ORTHO05D006750 1.6e-162 576.6 391 70.8
Gohir.D01G179900 Gossypium hirsutum HOM05D005510 ORTHO05D006750 1.6e-162 576.6 390 72.8
PSO339G1815 Papaver somniferum HOM05D005510 ORTHO05D006750 2.1e-162 576.2 416 68.0
Sopen10g030080 Solanum pennellii HOM05D005510 ORTHO05D006750 2.7e-162 575.9 390 72.3
PGSC0003DMG400008133 Solanum tuberosum HOM05D005510 ORTHO05D006750 2.7e-162 575.9 392 72.2
A09p49660 Brassica napus HOM05D005510 ORTHO05D006750 1.0e-161 573.9 403 70.7
BraA09t40419Z Brassica rapa HOM05D005510 ORTHO05D006750 1.0e-161 573.9 403 70.7
Lj5g0015267 Lotus japonicus HOM05D005510 ORTHO05D006750 1.0e-161 573.9 393 69.5
Gohir.A01G189700 Gossypium hirsutum HOM05D005510 ORTHO05D006750 2.3e-161 572.8 390 72.8
BolC8t50825H Brassica oleracea HOM05D005510 ORTHO05D006750 3.9e-161 572.0 400 70.0
Solyc10g079440.2 Solanum lycopersicum HOM05D005510 ORTHO05D006750 3.9e-161 572.0 415 68.9
Phvul.004G053400 Phaseolus vulgaris HOM05D005510 ORTHO05D006750 6.6e-161 571.2 392 68.4
PGR042G2248 Punica granatum HOM05D005510 ORTHO05D006750 1.1e-160 570.5 390 67.7
Sp5g05750 Schrenkiella parvula HOM05D005510 ORTHO05D006750 7.3e-160 567.8 399 69.2
Hund24472 Selenicereus undatus HOM05D005510 ORTHO05D006750 2.8e-159 565.8 412 68.2
COL.COLO4_37568 Corchorus olitorius HOM05D005510 ORTHO05D006750 8.1e-159 564.3 402 69.2
Peaxi162Scf00002g00419 Petunia axillaris HOM05D005510 ORTHO05D006750 1.1e-158 563.9 392 70.7
Lsat_1_v5_gn_5_40140 Lactuca sativa HOM05D005510 ORTHO05D006750 1.8e-158 563.1 432 64.6
ATR1096G068 Amborella trichopoda HOM05D005510 ORTHO05D006750 6.9e-158 561.2 394 67.3
TAR623G1399 Trochodendron aralioides HOM05D005510 ORTHO05D006750 6.9e-158 561.2 434 65.2
DCAR_020612 Daucus carota HOM05D005510 ORTHO05D006750 9.0e-158 560.8 393 70.0
HPP92_018208 Vanilla planifolia HOM05D005510 ORTHO05D006750 1.2e-157 560.5 392 69.1
arahy.Tifrunner.gnm1.ann1.VC24PE Arachis hypogaea HOM05D005510 ORTHO05D006750 5.8e-157 558.1 469 61.6
arahy.Tifrunner.gnm1.ann1.RHHN50 Arachis hypogaea HOM05D005510 ORTHO05D006750 9.9e-157 557.4 444 63.1
CDE08G0225 Ceratophyllum demersum HOM05D005510 ORTHO05D006750 3.8e-156 555.4 434 65.0
SalBow6G2337 Salvia bowleyana HOM05D005510 ORTHO05D006750 8.4e-156 554.3 416 65.1
SalBow6G2820 Salvia bowleyana HOM05D005510 ORTHO05D006750 3.2e-155 552.4 416 64.9
SGA_v2.0_scaffold69G23139 Striga asiatica HOM05D005510 ORTHO05D006750 4.2e-155 552.0 397 68.3
HanXRQChr02g0047171 Helianthus annuus HOM05D005510 ORTHO05D006750 1.6e-154 550.1 405 66.4
EL10Ac3g07380 Beta vulgaris HOM05D005510 ORTHO05D006750 1.7e-153 546.6 424 64.4
Haze_20353 Corylus avellana HOM05D005510 ORTHO05D006750 3.0e-153 545.8 373 71.3
AUR62020963 Chenopodium quinoa HOM05D005510 ORTHO05D006750 3.9e-153 545.4 409 65.3
EL10Ac3g07382 Beta vulgaris HOM05D005510 ORTHO05D006750 2.5e-152 542.7 469 59.7
Migut.J01685 Erythranthe guttata HOM05D005510 ORTHO05D006750 2.5e-152 542.7 397 67.5
Os01g0809900 Oryza sativa ssp. japonica HOM05D005510 ORTHO05D006750 2.6e-149 532.7 405 63.5
BcaC07g39994 Brassica carinata HOM05D005510 ORTHO05D006750 3.4e-149 532.3 400 66.5
Sc13g0000690 Simmondsia chinensis HOM05D005510 ORTHO05D006750 2.2e-148 529.6 392 66.3
Nitab4.5_0000646g0280 Nicotiana tabacum HOM05D005510 ORTHO05D006750 1.1e-142 510.8 419 62.8
CSS0036939 Camellia sinensis var. sinensis HOM05D005510 ORTHO05D006750 4.0e-142 508.8 333 73.6
unitig_749.g14152 Utricularia gibba HOM05D005510 ORTHO05D006750 1.9e-139 500.0 392 64.3
arahy.Tifrunner.gnm1.ann1.T4STFC Arachis hypogaea HOM05D005510 ORTHO05D006750 2.5e-139 499.6 414 62.1
VMungo0464G0325 Vigna mungo HOM05D005510 ORTHO05D006750 7.9e-138 494.6 434 56.7
ClCG04G005050 Citrullus lanatus HOM05D005510 ORTHO05D006750 1.5e-136 490.3 397 63.2
CAN.G641.38 Capsicum annuum HOM05D005510 ORTHO05D006750 1.1e-131 474.2 326 70.9
Thecc.05G124100 Theobroma cacao HOM05D005510 ORTHO05D006750 2.3e-129 466.5 308 74.7
ECA246G1668 Erigeron canadensis HOM05D005510 ORTHO05D006750 1.1e-128 464.2 398 60.6
Hma1.2p1_1327F.1_g275900 Hydrangea macrophylla HOM05D005510 ORTHO05D006750 2.4e-126 456.4 333 67.6
AUR62018456 Chenopodium quinoa HOM05D005510 ORTHO05D006750 4.1e-126 455.7 330 64.8
Sed0017548 Sechium edule HOM05D005510 ORTHO05D006750 1.1e-123 447.6 304 70.7
Pp3c12_4730 Physcomitrium patens HOM05D005510 ORTHO05D006750 3.9e-121 439.1 407 54.1
CiPaw.09G161300 Carya illinoinensis HOM05D005510 ORTHO05D006750 2.8e-119 433.0 281 74.0
C08p32070 Brassica napus HOM05D005510 ORTHO05D006750 1.2e-117 427.6 312 69.6
Nitab4.5_0002805g0080 Nicotiana tabacum HOM05D005510 ORTHO05D006750 2.0e-117 426.8 333 66.1
AagrBONN_evm.TU.Sc2ySwM_344.4799 Anthoceros agrestis HOM05D005510 ORTHO05D000746 1.6e-114 417.2 386 53.4
MBI13_g43864_MAGBIO Magnolia biondii HOM05D005510 ORTHO05D006750 8.2e-111 404.8 355 59.2
A09p49680 Brassica napus HOM05D005510 ORTHO05D006750 5.3e-110 402.1 289 68.5
Mapoly0011s0121 Marchantia polymorpha HOM05D005510 ORTHO05D006750 2.0e-109 400.2 361 55.1
BraA09t40424Z Brassica rapa HOM05D005510 ORTHO05D006750 4.5e-109 399.1 286 68.5
Zm00001eb150290 Zea mays HOM05D005510 ORTHO05D006750 6.3e-103 378.6 282 62.8
SMO116G0325 Selaginella moellendorffii HOM05D005510 ORTHO05D006750 3.1e-102 376.3 414 48.8
THA.LOC104803303 Tarenaya hassleriana HOM05D005510 ORTHO05D006750 7.0e-94 348.6 238 68.9
arahy.Tifrunner.gnm1.ann1.MR8QPJ Arachis hypogaea HOM05D005510 ORTHO05D006750 1.0e-92 344.7 386 49.7
CSS0041188 Camellia sinensis var. sinensis HOM05D005510 ORTHO05D006750 2.9e-92 343.2 241 69.7
CARHR166990 Cardamine hirsuta HOM05D005510 ORTHO05D006750 1.2e-88 331.3 236 65.7
TPR.G23234 Trifolium pratense HOM05D005510 ORTHO05D006750 2.6e-88 330.1 213 69.0
Cre13.g574150 Chlamydomonas reinhardtii HOM05D005510 ORTHO05D006750 4.9e-87 325.9 475 40.2
THA.LOC104803301 Tarenaya hassleriana HOM05D005510 ORTHO05D006750 5.2e-81 305.8 187 73.8
CAN.G248.49 Capsicum annuum HOM05D005510 ORTHO05D006750 1.5e-75 287.7 343 47.5
MSTRG.19825 Avicennia marina HOM05D005510 ORTHO05D006750 4.0e-57 226.5 159 72.3
TPR.G942 Trifolium pratense HOM05D005510 ORTHO05D006750 2.9e-55 220.3 148 73.0
Manes.07G109500 Manihot esculenta HOM05D005510 ORTHO05D006750 3.2e-54 216.9 156 69.2
Cfa027308 Carpinus fangiana HOM05D005510 ORTHO05D006750 8.6e-52 208.8 405 36.3
Manes.05G099066 Manihot esculenta HOM05D005510 ORTHO05D006750 3.3e-51 206.8 171 63.2
SEGI_04748 Sequoiadendron giganteum HOM05D005510 ORTHO05D006750 5.6e-51 206.1 157 64.3
PGSC0003DMG400012053 Solanum tuberosum HOM05D005510 ORTHO05D006750 1.2e-50 204.9 145 68.3
Zm00001eb093570 Zea mays HOM05D005510 ORTHO05D006750 4.0e-49 199.9 272 41.9
SMO356G0394 Selaginella moellendorffii HOM05D005510 ORTHO05D006750 7.6e-40 169.1 417 31.7
Mapoly0085s0100 Marchantia polymorpha HOM05D005510 ORTHO05D006750 1.1e-38 165.2 423 31.4
CBR_g4412 Chara braunii HOM05D005510 ORTHO05D006750 1.4e-38 164.9 423 32.2
Pp3c25_9310 Physcomitrium patens HOM05D005510 ORTHO05D006750 4.6e-37 159.8 436 30.7
AagrBONN_evm.TU.Sc2ySwM_344.567 Anthoceros agrestis HOM05D005510 ORTHO05D006750 6.6e-36 156.0 417 30.7
SalBow7G3561 Salvia bowleyana HOM05D005510 ORTHO05D006750 8.7e-36 155.6 120 66.7
CAN.G524.4 Capsicum annuum HOM05D005510 ORTHO05D006750 7.4e-27 125.9 90 61.1
MD14G1091800 Malus domestica HOM05D005510 ORTHO05D006750 1.1e-25 122.1 73 72.6
CAN.G636.4 Capsicum annuum HOM05D005510 ORTHO05D006750 2.4e-25 120.9 235 37.4
Zm00001eb341880 Zea mays HOM05D005510 ORTHO05D006750 3.1e-25 120.6 107 54.2
PRCOL_00000521 Prasinoderma coloniale HOM05D005510 ORTHO05D006750 9.0e-25 119.0 406 27.8
SEGI_32136 Sequoiadendron giganteum HOM05D005510 ORTHO05D006750 9.0e-25 119.0 81 66.7
AUR62018455 Chenopodium quinoa HOM05D005510 ORTHO05D006750 2.1e-21 107.8 100 61.0
MD14G1091600 Malus domestica HOM05D005510 ORTHO05D006750 7.4e-19 99.4 103 56.3
CAN.G641.39 Capsicum annuum HOM05D005510 ORTHO05D006750 2.1e-18 97.8 88 61.4
CDE09G0372 Ceratophyllum demersum HOM05D005510 ORTHO05D006750 7.2e-14 82.8 99 47.5
CAN.G524.9 Capsicum annuum HOM05D005510 ORTHO05D020273 1.6e-13 81.6 72 52.8
MD14G1091700 Malus domestica HOM05D005510 ORTHO05D006750 4.1e-09 67.0 37 89.2


User provided reference genes

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