Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc33.174 Carica papaya HOM05D006876 ORTHO05D008708 6.1e-126 454.1 227 100.0
Atru.chr8.919 Acer truncatum HOM05D006876 ORTHO05D008708 1.6e-81 306.6 228 69.3
THA.LOC104803253 Tarenaya hassleriana HOM05D006876 ORTHO05D008708 4.6e-81 305.1 231 67.5
MD12G1111100 Malus domestica HOM05D006876 ORTHO05D008708 1.3e-80 303.5 226 66.4
Dinv13650 Davidia involucrata HOM05D006876 ORTHO05D008708 5.1e-80 301.6 238 65.1
Prupe.7G023500 Prunus persica HOM05D006876 ORTHO05D008708 8.7e-80 300.8 233 64.8
MELO3C019167.2 Cucumis melo HOM05D006876 ORTHO05D008708 3.3e-79 298.9 246 64.2
Ciclev10012641m.g Citrus clementina HOM05D006876 ORTHO05D008708 5.6e-79 298.1 234 67.9
Cfa019902 Carpinus fangiana HOM05D006876 ORTHO05D008708 2.8e-78 295.8 213 70.0
ClCG04G005040 Citrullus lanatus HOM05D006876 ORTHO05D008708 4.8e-78 295.0 247 63.2
PGR142G2444 Punica granatum HOM05D006876 ORTHO05D008708 4.8e-78 295.0 241 66.0
CANSAT78G2074 Cannabis sativa HOM05D006876 ORTHO05D008708 8.1e-78 294.3 240 62.1
CsaV3_4G029000 Cucumis sativus L. HOM05D006876 ORTHO05D008708 1.1e-77 293.9 246 63.0
Thecc.05G117700 Theobroma cacao HOM05D006876 ORTHO05D008708 1.8e-77 293.1 237 65.8
CSS0024544 Camellia sinensis var. sinensis HOM05D006876 ORTHO05D008708 3.1e-77 292.4 243 62.1
CiPaw.09G161500 Carya illinoinensis HOM05D006876 ORTHO05D008708 1.2e-76 290.4 220 66.8
Manes.09G001600 Manihot esculenta HOM05D006876 ORTHO05D008708 1.5e-76 290.0 231 66.2
Potri.006G026300 Populus trichocarpa HOM05D006876 ORTHO05D008708 2.0e-76 289.7 231 66.2
Peaxi162Scf00003g05358 Petunia axillaris HOM05D006876 ORTHO05D008708 4.5e-76 288.5 237 64.1
Sp5g05770 Schrenkiella parvula HOM05D006876 ORTHO05D008708 5.8e-76 288.1 232 65.1
TWI53G1364 Tripterygium wilfordii HOM05D006876 ORTHO05D008708 1.3e-75 287.0 233 64.4
Sed0006068 Sechium edule HOM05D006876 ORTHO05D008708 1.7e-75 286.6 242 60.7
AL5G38200 Arabidopsis lyrata HOM05D006876 ORTHO05D008708 4.9e-75 285.0 232 64.7
AT3G56820 Arabidopsis thaliana HOM05D006876 ORTHO05D008708 6.5e-75 284.6 234 65.8
QL07p015416 Quercus lobata HOM05D006876 ORTHO05D008708 8.4e-75 284.3 238 60.1
RcHm_v2.0_Chr7g0183121 Rosa chinensis HOM05D006876 ORTHO05D008708 5.5e-74 281.6 239 61.5
GSVIVG01025828001 Vitis vinifera HOM05D006876 ORTHO05D008708 5.5e-74 281.6 229 64.2
EL10Ac3g07376 Beta vulgaris HOM05D006876 ORTHO05D008708 1.6e-73 280.0 233 64.4
CARHR166970 Cardamine hirsuta HOM05D006876 ORTHO05D008708 1.6e-73 280.0 232 63.4
COL.COLO4_21445 Corchorus olitorius HOM05D006876 ORTHO05D008708 2.1e-73 279.6 238 64.7
Gohir.A13G086570 Gossypium hirsutum HOM05D006876 ORTHO05D008708 2.1e-73 279.6 232 61.6
FAN19G1913 Fragaria x ananassa HOM05D006876 ORTHO05D008708 2.7e-73 279.3 234 62.0
Carub.0005s2355 Capsella rubella HOM05D006876 ORTHO05D008708 3.5e-73 278.9 231 61.9
Duzib114G0933 Durio zibethinus HOM05D006876 ORTHO05D008708 4.6e-73 278.5 238 64.3
Sc19g0007790 Simmondsia chinensis HOM05D006876 ORTHO05D008708 4.6e-73 278.5 227 61.2
Aa31LG10G11670 Aethionema arabicum HOM05D006876 ORTHO05D008708 6.0e-73 278.1 230 63.0
Gohir.D13G092600 Gossypium hirsutum HOM05D006876 ORTHO05D008708 6.0e-73 278.1 233 61.4
A09p49640 Brassica napus HOM05D006876 ORTHO05D008708 1.8e-72 276.6 232 60.8
BraA09t40417Z Brassica rapa HOM05D006876 ORTHO05D008708 1.8e-72 276.6 232 60.8
PSO339G4949 Papaver somniferum HOM05D006876 ORTHO05D008708 3.9e-72 275.4 238 60.5
Sopen10g028620 Solanum pennellii HOM05D006876 ORTHO05D008708 3.9e-72 275.4 241 61.8
PGSC0003DMG400007191 Solanum tuberosum HOM05D006876 ORTHO05D008708 3.9e-72 275.4 245 60.8
Ah.13g077470 Amaranthus hybridus HOM05D006876 ORTHO05D008708 5.1e-72 275.0 231 61.9
Thhalv10006232m.g Eutrema salsugineum HOM05D006876 ORTHO05D008708 6.7e-72 274.6 232 62.1
RhsimUnG0021300 Rhododendron simsii HOM05D006876 ORTHO05D008708 8.7e-72 274.2 257 58.4
Solyc10g076930.2 Solanum lycopersicum HOM05D006876 ORTHO05D008708 8.7e-72 274.2 241 61.8
FAN28G2491 Fragaria x ananassa HOM05D006876 ORTHO05D008708 1.1e-71 273.9 233 60.9
BcaC07g40117 Brassica carinata HOM05D006876 ORTHO05D008708 1.5e-71 273.5 227 60.8
Nitab4.5_0002131g0070 Nicotiana tabacum HOM05D006876 ORTHO05D008708 1.5e-71 273.5 245 61.6
Nitab4.5_0000123g0090 Nicotiana tabacum HOM05D006876 ORTHO05D008708 1.9e-71 273.1 236 62.3
vmacro07595 Vaccinium macrocarpon HOM05D006876 ORTHO05D008708 1.9e-71 273.1 271 57.2
Gorai.010G139600 Gossypium raimondii HOM05D006876 ORTHO05D008708 7.4e-71 271.2 240 59.6
Sabra06G0019500 Salix brachista HOM05D006876 ORTHO05D008708 1.3e-70 270.4 230 62.2
BcaC07g39992 Brassica carinata HOM05D006876 ORTHO05D008708 2.8e-70 269.2 227 60.8
MBI19_g10813_MAGBIO Magnolia biondii HOM05D006876 ORTHO05D008708 4.8e-70 268.5 232 62.1
C08p32050 Brassica napus HOM05D006876 ORTHO05D008708 6.2e-70 268.1 227 60.8
BolC8t50823H Brassica oleracea HOM05D006876 ORTHO05D008708 6.2e-70 268.1 227 60.8
PSO384G4569 Papaver somniferum HOM05D006876 ORTHO05D008708 1.1e-69 267.3 239 58.6
MSTRG.10760 Avicennia marina HOM05D006876 ORTHO05D008708 2.4e-69 266.2 237 59.1
Hma1.2p1_0694F.1_g204340 Hydrangea macrophylla HOM05D006876 ORTHO05D008708 3.1e-69 265.8 252 56.3
Lalb_Chr24g0400801 Lupinus albus HOM05D006876 ORTHO05D008708 2.6e-68 262.7 208 61.5
Hund24486 Selenicereus undatus HOM05D006876 ORTHO05D008708 2.6e-68 262.7 230 58.7
AUR62020968 Chenopodium quinoa HOM05D006876 ORTHO05D008708 3.4e-68 262.3 228 60.1
Eucgr.K01704 Eucalyptus grandis HOM05D006876 ORTHO05D008708 5.8e-68 261.5 244 57.8
Lsat_1_v5_gn_6_24200 Lactuca sativa HOM05D006876 ORTHO05D008708 1.3e-67 260.4 240 55.0
Haze_20349 Corylus avellana HOM05D006876 ORTHO05D008708 6.5e-67 258.1 246 57.7
SGA_v2.0_scaffold123G33492 Striga asiatica HOM05D001269 ORTHO05D001083 8.4e-67 257.7 242 57.4
Migut.K00190 Erythranthe guttata HOM05D006876 ORTHO05D008708 2.5e-66 256.1 209 61.2
arahy.Tifrunner.gnm1.ann1.SXUX32 Arachis hypogaea HOM05D006876 ORTHO05D008708 1.6e-65 253.4 200 61.0
arahy.Tifrunner.gnm1.ann1.U8TZLL Arachis hypogaea HOM05D006876 ORTHO05D008708 1.6e-65 253.4 200 61.0
Cc06_g21190 Coffea canephora HOM05D006876 ORTHO05D008708 1.6e-65 253.4 202 61.9
SalBow1G4764 Salvia bowleyana HOM05D006876 ORTHO05D008708 1.5e-63 246.9 242 55.0
Medtr7g088040 Medicago truncatula HOM05D006876 ORTHO05D008708 1.9e-63 246.5 207 59.4
Migut.K00192 Erythranthe guttata HOM05D006876 ORTHO05D008708 4.8e-62 241.9 194 61.3
Aqoxy1G01501 Aquilegia oxysepala HOM05D006876 ORTHO05D008708 6.3e-62 241.5 225 56.0
Lj1g0024709 Lotus japonicus HOM05D006876 ORTHO05D008708 1.4e-61 240.4 225 56.0
unitig_899.g15477 Utricularia gibba HOM05D006876 ORTHO05D008708 1.2e-60 237.3 237 54.0
Nn7g37203 Nelumbo nucifera HOM05D006876 ORTHO05D008708 1.5e-60 236.9 211 59.7
Hund24492 Selenicereus undatus HOM05D006876 ORTHO05D008708 2.0e-60 236.5 228 55.3
TAR623G1567 Trochodendron aralioides HOM05D006876 ORTHO05D008708 1.0e-59 234.2 156 71.8
Phvul.001G101300 Phaseolus vulgaris HOM05D006876 ORTHO05D008708 6.5e-59 231.5 227 52.0
Glyma.19G122400 Glycine max HOM05D006876 ORTHO05D008708 5.5e-58 228.4 214 55.6
Os01g0810200 Oryza sativa ssp. japonica HOM05D006876 ORTHO05D008708 9.4e-58 227.6 242 52.1
Zm00001eb150270 Zea mays HOM05D006876 ORTHO05D008708 4.6e-57 225.3 240 51.7
VMungo1383G0045 Vigna mungo HOM05D006876 ORTHO05D008708 1.8e-56 223.4 227 51.1
arahy.Tifrunner.gnm1.ann1.R6YTNA Arachis hypogaea HOM05D006876 ORTHO05D008708 3.9e-56 222.2 202 55.4
Glyma.03G003700 Glycine max HOM05D006876 ORTHO05D008708 3.9e-56 222.2 202 52.5
Aqoxy1G01505 Aquilegia oxysepala HOM05D006876 ORTHO05D008708 3.4e-52 209.1 133 70.7
Psat3g083640 Pisum sativum HOM05D006876 ORTHO05D008708 1.4e-50 203.8 141 65.2
Oeu032953.2 Olea europaea HOM05D006876 ORTHO05D008708 4.8e-46 188.7 313 39.9
Lj4A828G46 Lonicera japonica HOM05D006876 ORTHO05D008708 4.1e-45 185.7 110 71.8
FvH4_1g29600 Fragaria vesca HOM05D006876 ORTHO05D008708 2.0e-44 183.3 167 59.9
Hma1.2p1_0694F.1_g204350 Hydrangea macrophylla HOM05D006876 ORTHO05D008708 3.5e-44 182.6 108 74.1
ATR1096G134 Amborella trichopoda HOM05D006876 ORTHO05D008708 7.7e-44 181.4 247 44.5
DCAR_020618 Daucus carota HOM05D006876 ORTHO05D008708 1.5e-42 177.2 110 70.9
SEGI_40976 Sequoiadendron giganteum HOM05D006876 ORTHO05D008708 4.7e-41 172.2 137 56.2
CSS0021314 Camellia sinensis var. sinensis HOM05D006876 ORTHO05D008708 1.0e-40 171.0 109 67.9
ECA233G0065 Erigeron canadensis HOM05D000444 ORTHO05D000489 2.2e-38 163.3 108 63.0
Lalb_Chr02g0157641 Lupinus albus HOM05D006876 ORTHO05D008708 1.6e-36 157.1 178 48.3
QL05p001451 Quercus lobata HOM05D006876 ORTHO05D008708 5.5e-34 148.7 95 71.6
Actinidia37859 Actinidia chinensis HOM05D006876 ORTHO05D008708 2.1e-33 146.7 87 77.0
arahy.Tifrunner.gnm1.ann1.S4H51W Arachis hypogaea HOM05D006876 ORTHO05D008708 1.8e-32 143.7 134 53.0
arahy.Tifrunner.gnm1.ann1.QI3NWI Arachis hypogaea HOM05D006876 ORTHO05D008708 4.2e-26 122.5 77 68.8
arahy.Tifrunner.gnm1.ann1.8Z6XIB Arachis hypogaea HOM05D006876 ORTHO05D008708 4.7e-25 119.0 76 68.4
arahy.Tifrunner.gnm1.ann1.ERVJ4V Arachis hypogaea HOM05D006876 ORTHO05D008708 2.0e-23 113.6 184 36.4
CBR_g17867 Chara braunii HOM05D006876 ORTHO05D008708 3.7e-22 109.4 131 42.0
QL05p001731 Quercus lobata HOM05D006876 ORTHO05D008708 1.4e-21 107.5 68 75.0
QL05p085390 Quercus lobata HOM05D006876 ORTHO05D008708 1.4e-21 107.5 68 75.0
Oeu007164.1 Olea europaea HOM05D006876 ORTHO05D008708 1.5e-18 97.4 71 63.4
Ca_08331_v3 Cicer arietinum L. HOM05D006876 ORTHO05D008708 7.2e-18 95.1 68 63.2
DCAR_020619 Daucus carota HOM05D006876 ORTHO05D008708 3.4e-15 86.3 152 42.8
arahy.Tifrunner.gnm1.ann1.Q5BN79 Arachis hypogaea HOM05D006876 ORTHO05D008708 9.8e-15 84.7 58 67.2
MCO02G060 Micromonas commoda HOM05D006876 ORTHO05D008708 9.8e-15 84.7 131 33.6
Oeu039192.1 Olea europaea HOM05D006876 ORTHO05D008708 4.1e-13 79.3 137 42.3
Glyma.10G143650 Glycine max HOM05D006876 ORTHO05D008708 5.0e-11 72.4 43 67.4
C06p23790 Brassica napus HOM05D006876 ORTHO05D040197 4.3e-10 69.3 53 64.2
BolC6t37548H Brassica oleracea HOM05D006876 ORTHO05D040197 5.6e-10 68.9 53 64.2
HPP92_016900 Vanilla planifolia HOM05D006876 ORTHO05D008708 1.0e-08 64.7 133 36.8


User provided reference genes

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