Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc33.16 Carica papaya HOM05D006540 ORTHO05D008202 1.0e-180 636.7 351 100.0
CiPaw.05G182700 Carya illinoinensis HOM05D006540 ORTHO05D008202 2.2e-130 469.5 353 72.8
Atru.chr11.2104 Acer truncatum HOM05D006540 ORTHO05D008202 2.4e-129 466.1 352 70.5
ClCG05G025710 Citrullus lanatus HOM05D006540 ORTHO05D008202 1.9e-126 456.4 352 69.0
Duzib268G1404 Durio zibethinus HOM05D006540 ORTHO05D008202 6.2e-125 451.4 355 71.8
Cfa009208 Carpinus fangiana HOM05D006540 ORTHO05D008202 1.5e-123 446.8 354 70.3
MD16G1102400 Malus domestica HOM05D006540 ORTHO05D008202 4.1e-121 438.7 358 69.3
Manes.13G024900 Manihot esculenta HOM05D006540 ORTHO05D008202 1.3e-119 433.7 349 70.2
CARHR147570 Cardamine hirsuta HOM05D006540 ORTHO05D008202 2.3e-119 433.0 358 70.1
Gorai.002G186600 Gossypium raimondii HOM05D006540 ORTHO05D008202 2.3e-119 433.0 359 71.6
Ciclev10032003m.g Citrus clementina HOM05D006540 ORTHO05D008202 6.6e-119 431.4 353 68.3
MD13G1101900 Malus domestica HOM05D006540 ORTHO05D008202 8.6e-119 431.0 358 67.6
Gohir.D01G150500 Gossypium hirsutum HOM05D006540 ORTHO05D008202 2.5e-118 429.5 359 71.3
Aa31LG2G5960 Aethionema arabicum HOM05D006540 ORTHO05D008202 4.3e-118 428.7 358 68.4
BcaC06g33900 Brassica carinata HOM05D006540 ORTHO05D008202 1.2e-117 427.2 358 66.5
THA.LOC104825662 Tarenaya hassleriana HOM05D006540 ORTHO05D008202 2.8e-117 426.0 351 70.1
Thhalv10004491m.g Eutrema salsugineum HOM05D006540 ORTHO05D008202 4.7e-117 425.2 359 69.1
AL5G15370 Arabidopsis lyrata HOM05D006540 ORTHO05D008202 6.2e-117 424.9 356 71.1
C07p35560 Brassica napus HOM05D006540 ORTHO05D008202 1.4e-116 423.7 358 66.2
BolC7t44080H Brassica oleracea HOM05D006540 ORTHO05D008202 1.4e-116 423.7 358 66.2
Hma1.2p1_0223F.1_g093990 Hydrangea macrophylla HOM05D006540 ORTHO05D008202 3.1e-116 422.5 377 63.1
AT3G26580 Arabidopsis thaliana HOM05D006540 ORTHO05D008202 8.9e-116 421.0 355 69.9
A06p41910 Brassica napus HOM05D006540 ORTHO05D008202 1.5e-115 420.2 358 66.8
BraA06t27110Z Brassica rapa HOM05D006540 ORTHO05D008202 1.5e-115 420.2 358 66.8
PGR102G2745 Punica granatum HOM05D006540 ORTHO05D008202 2.9e-114 416.0 356 68.3
Eucgr.B03288 Eucalyptus grandis HOM05D006540 ORTHO05D008202 4.9e-114 415.2 356 69.7
Dinv24788 Davidia involucrata HOM05D006540 ORTHO05D008202 1.9e-113 413.3 355 66.5
Prupe.1G243900 Prunus persica HOM05D006540 ORTHO05D008202 1.9e-113 413.3 358 67.3
RcHm_v2.0_Chr4g0432921 Rosa chinensis HOM05D006540 ORTHO05D008202 1.9e-113 413.3 359 66.9
TAR622G1382 Trochodendron aralioides HOM05D006540 ORTHO05D008202 4.1e-113 412.1 356 64.9
Sp2g15690 Schrenkiella parvula HOM05D006540 ORTHO05D008202 9.2e-113 411.0 358 67.9
MSTRG.568 Avicennia marina HOM05D006540 ORTHO05D008202 2.1e-112 409.8 362 64.4
Actinidia37429 Actinidia chinensis HOM05D006540 ORTHO05D008202 5.1e-111 405.2 351 67.0
Gohir.A01G159600 Gossypium hirsutum HOM05D006540 ORTHO05D008202 6.6e-111 404.8 353 70.0
Migut.K00595 Erythranthe guttata HOM05D006540 ORTHO05D008202 1.1e-110 404.1 357 63.6
SalBow2G2200 Salvia bowleyana HOM05D006540 ORTHO05D008202 1.1e-110 404.1 365 62.7
Carub.0005s0457 Capsella rubella HOM05D006540 ORTHO05D008202 7.3e-110 401.4 356 68.3
Phvul.003G064400 Phaseolus vulgaris HOM05D006540 ORTHO05D008202 9.6e-110 401.0 353 64.3
Thecc.02G259400 Theobroma cacao HOM05D006540 ORTHO05D008202 2.1e-109 399.8 353 69.1
BcaC06g31063 Brassica carinata HOM05D006540 ORTHO05D008202 4.7e-109 398.7 356 64.0
Oeu059907.1 Olea europaea HOM05D006540 ORTHO05D008202 6.2e-109 398.3 360 65.0
QL03p058139 Quercus lobata HOM05D006540 ORTHO05D008202 6.2e-109 398.3 410 60.5
Haze_12245 Corylus avellana HOM05D006540 ORTHO05D008202 1.1e-108 397.5 373 62.5
FAN07G1259 Fragaria x ananassa HOM05D006540 ORTHO05D008202 1.1e-108 397.5 362 64.9
Duzib248G0112 Durio zibethinus HOM05D006540 ORTHO05D008202 2.4e-108 396.4 355 67.6
FvH4_4g25530 Fragaria vesca HOM05D006540 ORTHO05D008202 4.0e-108 395.6 362 64.4
FAN12G0822 Fragaria x ananassa HOM05D006540 ORTHO05D008202 4.0e-108 395.6 362 64.4
FAN17G1845 Fragaria x ananassa HOM05D006540 ORTHO05D008202 5.2e-108 395.2 361 64.5
FAN22G2305 Fragaria x ananassa HOM05D006540 ORTHO05D008202 8.9e-108 394.4 362 64.1
TWI18G0987 Tripterygium wilfordii HOM05D006540 ORTHO05D008202 4.4e-107 392.1 359 63.0
Cc11_g15700 Coffea canephora HOM05D006540 ORTHO05D008202 3.8e-106 389.0 363 65.6
Lj4g0023216 Lotus japonicus HOM05D006540 ORTHO05D008202 4.9e-106 388.7 354 63.6
Glyma.17G134500 Glycine max HOM05D006540 ORTHO05D008202 4.2e-105 385.6 354 66.4
vmacro16198 Vaccinium macrocarpon HOM05D006540 ORTHO05D008202 4.2e-105 385.6 353 62.0
COL.COLO4_24263 Corchorus olitorius HOM05D006540 ORTHO05D008202 3.0e-103 379.4 353 60.3
Rhsim12G0110600 Rhododendron simsii HOM05D006540 ORTHO05D008202 5.1e-103 378.6 358 65.4
arahy.Tifrunner.gnm1.ann1.LD9JWE Arachis hypogaea HOM05D006540 ORTHO05D008202 8.7e-103 377.9 358 64.5
arahy.Tifrunner.gnm1.ann1.NX3C69 Arachis hypogaea HOM05D006540 ORTHO05D008202 1.9e-102 376.7 358 64.2
CANSAT35G0572 Cannabis sativa HOM05D006540 ORTHO05D008202 9.6e-102 374.4 357 64.4
Actinidia15092 Actinidia chinensis HOM05D006540 ORTHO05D008202 1.6e-101 373.6 351 62.4
vmacro01127 Vaccinium macrocarpon HOM05D006540 ORTHO05D008202 1.6e-101 373.6 356 61.8
Lj6A811T79 Lonicera japonica HOM05D006540 ORTHO05D008202 6.2e-101 371.7 362 60.2
EL10Ac6g13801 Beta vulgaris HOM05D006540 ORTHO05D008202 1.1e-100 370.9 356 62.1
PGSC0003DMG400018605 Solanum tuberosum HOM05D006540 ORTHO05D008202 1.8e-100 370.2 358 60.9
Potri.013G090000 Populus trichocarpa HOM05D006540 ORTHO05D008202 2.6e-99 366.3 354 61.3
Sabra13G0070200 Salix brachista HOM05D006540 ORTHO05D008202 3.4e-99 365.9 301 69.8
Peaxi162Scf00128g00138 Petunia axillaris HOM05D006540 ORTHO05D008202 7.6e-99 364.8 362 60.5
DCAR_024432 Daucus carota HOM05D006540 ORTHO05D008202 1.3e-98 364.0 336 62.2
Sc04g0009450 Simmondsia chinensis HOM05D006540 ORTHO05D008202 4.9e-98 362.1 355 62.3
Medtr8g069450 Medicago truncatula HOM05D006540 ORTHO05D008202 1.0e-95 354.4 353 59.2
Nitab4.5_0000007g0060 Nicotiana tabacum HOM05D006540 ORTHO05D008202 1.7e-95 353.6 362 56.6
PSO017G4849 Papaver somniferum HOM05D006540 ORTHO05D008202 1.7e-95 353.6 368 54.9
Aqoxy3G01202 Aquilegia oxysepala HOM05D006540 ORTHO05D008202 2.3e-95 353.2 360 57.2
Nitab4.5_0003628g0010 Nicotiana tabacum HOM05D006540 ORTHO05D008202 8.7e-95 351.3 362 56.6
GSVIVG01004073001 Vitis vinifera HOM05D006540 ORTHO05D008202 9.6e-94 347.8 196 86.2
ATR0686G190 Amborella trichopoda HOM05D006540 ORTHO05D008202 1.3e-93 347.4 291 65.3
CSS0000303 Camellia sinensis var. sinensis HOM05D006540 ORTHO05D008202 1.3e-93 347.4 362 61.9
CDE09G1037 Ceratophyllum demersum HOM05D006540 ORTHO05D008202 1.3e-93 347.4 351 57.8
Psat4g116680 Pisum sativum HOM05D006540 ORTHO05D008202 1.6e-93 347.1 362 58.0
unitig_21.g20872 Utricularia gibba HOM05D006540 ORTHO05D008202 1.6e-93 347.1 357 57.1
CDE02G2769 Ceratophyllum demersum HOM05D006540 ORTHO05D008202 2.1e-93 346.7 351 57.3
Ca_22583_v3 Cicer arietinum L. HOM05D006540 ORTHO05D008202 1.8e-92 343.6 352 61.9
Ah.03g133040 Amaranthus hybridus HOM05D006540 ORTHO05D008202 1.2e-91 340.9 356 61.5
Nn4g22628 Nelumbo nucifera HOM05D006540 ORTHO05D008202 9.9e-91 337.8 193 85.5
Sopen05g008320 Solanum pennellii HOM05D006540 ORTHO05D008202 9.9e-91 337.8 358 55.3
Rhsim12G0041000 Rhododendron simsii HOM05D006540 ORTHO05D008202 2.4e-89 333.2 434 52.5
Lalb_Chr05g0228421 Lupinus albus HOM05D006540 ORTHO05D008202 9.3e-89 331.3 352 56.0
Lsat_1_v5_gn_8_152220 Lactuca sativa HOM05D006540 ORTHO05D008202 2.7e-88 329.7 364 58.2
CAN.G832.5 Capsicum annuum HOM05D006540 ORTHO05D008202 7.9e-88 328.2 362 55.8
PSO478G4529 Papaver somniferum HOM05D006540 ORTHO05D008202 5.1e-87 325.5 345 55.1
AUR62024282 Chenopodium quinoa HOM05D006540 ORTHO05D008202 3.3e-86 322.8 355 55.2
ECA233G5619 Erigeron canadensis HOM05D006540 ORTHO05D008202 1.4e-84 317.4 252 68.3
MBI10_g13027_MAGBIO Magnolia biondii HOM05D006540 ORTHO05D008202 4.0e-84 315.8 394 54.6
HanXRQChr08g0208131 Helianthus annuus HOM05D006540 ORTHO05D008202 2.5e-81 306.6 367 55.6
MELO3C011955.2 Cucumis melo HOM05D006540 ORTHO05D008202 1.3e-79 300.8 289 61.2
VMungo0251G1250 Vigna mungo HOM05D006540 ORTHO05D008202 8.7e-79 298.1 287 63.4
CsaV3_5G031170 Cucumis sativus L. HOM05D006540 ORTHO05D008202 1.1e-78 297.7 282 61.7
AUR62005459 Chenopodium quinoa HOM05D006540 ORTHO05D008202 3.3e-78 296.2 355 52.1
HPP92_002022 Vanilla planifolia HOM05D006540 ORTHO05D008202 4.1e-76 289.3 249 63.5
Sed0005489 Sechium edule HOM05D006540 ORTHO05D008202 3.4e-75 286.2 282 58.9
BcaB01g00564 Brassica carinata HOM05D006540 ORTHO05D008202 7.9e-72 275.0 288 56.2
TPR.G17765 Trifolium pratense HOM05D006540 ORTHO05D008202 1.0e-71 274.6 329 53.8
TAR374G0845 Trochodendron aralioides HOM05D006540 ORTHO05D008202 8.5e-66 255.0 286 61.5
Os03g0428800 Oryza sativa ssp. japonica HOM05D006540 ORTHO05D008202 2.5e-62 243.4 201 61.7
Zm00001eb096140 Zea mays HOM05D006540 ORTHO05D008202 1.4e-60 237.7 250 54.8
Mapoly0037s0067 Marchantia polymorpha HOM05D006540 ORTHO05D008202 3.0e-55 219.9 244 50.0
AagrBONN_evm.TU.Sc2ySwM_340.367 Anthoceros agrestis HOM05D006540 ORTHO05D008202 2.6e-54 216.9 245 47.3
SEGI_37038 Sequoiadendron giganteum HOM05D006540 ORTHO05D008202 3.7e-53 213.0 173 57.8
SMO347G0417 Selaginella moellendorffii HOM05D006540 ORTHO05D008202 2.2e-50 203.8 242 48.3
Pp3c27_6670 Physcomitrium patens HOM05D006540 ORTHO05D008202 8.0e-48 195.3 193 50.3
BcaC06g33898 Brassica carinata HOM05D006540 ORTHO05D008202 2.5e-25 120.6 82 69.5
CBR_g8379 Chara braunii HOM05D006540 ORTHO05D008202 2.2e-21 107.5 138 42.8
Cre12.g528050 Chlamydomonas reinhardtii HOM05D006540 ORTHO05D008202 2.0e-19 100.9 171 38.0
Oeu029879.1 Olea europaea HOM05D006540 ORTHO05D008202 3.9e-18 96.7 72 62.5
RcHm_v2.0_Chr5g0067811 Rosa chinensis HOM05D006540 ORTHO05D008202 1.9e-17 94.4 61 80.3
MCO07G599 Micromonas commoda HOM05D006540 ORTHO05D008202 1.6e-16 91.3 136 37.5
PRCOL_00004949 Prasinoderma coloniale HOM05D006540 ORTHO05D008202 4.0e-15 86.7 211 30.8
QL04p066147 Quercus lobata HOM05D006540 ORTHO05D008202 4.0e-15 86.7 52 88.5
unitig_744.g24293 Utricularia gibba HOM05D006540 ORTHO05D008202 4.6e-11 73.2 44 70.5
TAR625G0150 Trochodendron aralioides HOM05D006540 ORTHO05D008202 4.3e-09 66.6 104 42.3
Solyc05g013480.4 Solanum lycopersicum HOM05D006540 ORTHO05D008202 5.8e-06 56.2 194 32.5


User provided reference genes

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