Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc33.155 Carica papaya HOM05D000706 ORTHO05D120765 1.1e-47 193.0 100 100.0
Duzib177G0677 Durio zibethinus HOM05D000706 ORTHO05D001554 3.0e-08 62.0 73 49.3
Prupe.1G559800 Prunus persica HOM05D000706 ORTHO05D001554 3.0e-08 62.0 105 41.9
Gohir.A08G223000 Gossypium hirsutum HOM05D000706 ORTHO05D001554 3.9e-08 61.6 73 46.6
Gorai.004G259200 Gossypium raimondii HOM05D000706 ORTHO05D001554 3.9e-08 61.6 73 46.6
CARHR204580 Cardamine hirsuta HOM05D000706 ORTHO05D001554 5.1e-08 61.2 72 51.4
Sp2g26800 Schrenkiella parvula HOM05D000706 ORTHO05D001554 5.1e-08 61.2 94 46.8
AT5G63700 Arabidopsis thaliana HOM05D000706 ORTHO05D001554 6.7e-08 60.8 94 43.6
CARHR190040 Cardamine hirsuta HOM05D000706 ORTHO05D001554 6.7e-08 60.8 79 43.0
Gohir.D08G243300 Gossypium hirsutum HOM05D000706 ORTHO05D001554 8.7e-08 60.5 73 45.2
AL8G40850 Arabidopsis lyrata HOM05D000706 ORTHO05D001554 1.5e-07 59.7 100 41.0
A09p08390 Brassica napus HOM05D000706 ORTHO05D001554 1.5e-07 59.7 85 45.9
BraA09t36489Z Brassica rapa HOM05D000706 ORTHO05D001554 1.5e-07 59.7 85 45.9
Lj2g0014541 Lotus japonicus HOM05D000706 ORTHO05D001554 1.5e-07 59.7 73 46.6
AL6G18900 Arabidopsis lyrata HOM05D000706 ORTHO05D001554 1.9e-07 59.3 80 46.2
RcHm_v2.0_Chr3g0458001 Rosa chinensis HOM05D000706 ORTHO05D001554 1.9e-07 59.3 89 44.9
Thecc.05G211200 Theobroma cacao HOM05D000706 ORTHO05D001554 1.9e-07 59.3 87 41.4
BcaB03g14881 Brassica carinata HOM05D003697 ORTHO05D005452 2.5e-07 58.9 117 41.0
C09p09500 Brassica napus HOM05D000706 ORTHO05D001554 3.3e-07 58.5 85 47.1
Carub.0008s2447 Capsella rubella HOM05D000706 ORTHO05D001554 3.3e-07 58.5 94 41.5
Carub.0006s2126 Capsella rubella HOM05D000706 ORTHO05D001554 4.3e-07 58.2 100 38.0
AL6G34760 Arabidopsis lyrata HOM05D000706 ORTHO05D001554 5.7e-07 57.8 85 41.2
C02p60840 Brassica napus HOM05D000706 ORTHO05D001554 9.6e-07 57.0 72 45.8
Carub.0006s0735 Capsella rubella HOM05D000706 ORTHO05D001554 9.6e-07 57.0 94 40.4
FAN02G3531 Fragaria x ananassa HOM05D000706 ORTHO05D001554 9.6e-07 57.0 70 47.1
FAN05G2021 Fragaria x ananassa HOM05D000706 ORTHO05D001554 9.6e-07 57.0 70 45.7
FAN14G2252 Fragaria x ananassa HOM05D000706 ORTHO05D001554 9.6e-07 57.0 79 43.0
FvH4_6g08140 Fragaria vesca HOM05D000706 ORTHO05D001554 1.3e-06 56.6 79 43.0
FvH4_7g09440 Fragaria vesca HOM05D000706 ORTHO05D001554 1.3e-06 56.6 70 47.1
FAN06G0551 Fragaria x ananassa HOM05D000706 ORTHO05D001554 1.3e-06 56.6 70 47.1
FAN06G0903 Fragaria x ananassa HOM05D000706 ORTHO05D001554 1.3e-06 56.6 70 47.1
FAN10G2685 Fragaria x ananassa HOM05D000706 ORTHO05D001554 1.3e-06 56.6 70 47.1
Sp6g34490 Schrenkiella parvula HOM05D000706 ORTHO05D001554 1.6e-06 56.2 71 45.1
AT5G23480 Arabidopsis thaliana HOM05D000706 ORTHO05D001554 2.1e-06 55.8 88 36.4
BraA02t09041Z Brassica rapa HOM05D000706 ORTHO05D001554 2.8e-06 55.5 73 42.5
Aa31LG3G18110 Aethionema arabicum HOM05D000706 ORTHO05D001554 3.7e-06 55.1 86 39.5
Eucgr.H05064 Eucalyptus grandis HOM05D000706 ORTHO05D001554 3.7e-06 55.1 86 40.7
Oeu064260.1 Olea europaea HOM05D000706 ORTHO05D001554 3.7e-06 55.1 79 43.0
arahy.Tifrunner.gnm1.ann1.JT5ALL Arachis hypogaea HOM05D000706 ORTHO05D001554 4.8e-06 54.7 70 44.3
arahy.Tifrunner.gnm1.ann1.KX39Z4 Arachis hypogaea HOM05D000706 ORTHO05D001554 4.8e-06 54.7 70 44.3
FvH4_6g52630 Fragaria vesca HOM05D000706 ORTHO05D001554 4.8e-06 54.7 70 44.3
AT5G08430 Arabidopsis thaliana HOM05D000706 ORTHO05D001554 6.2e-06 54.3 80 41.2
FAN05G3552 Fragaria x ananassa HOM05D000706 ORTHO05D001554 6.2e-06 54.3 89 37.1
Phvul.004G133700 Phaseolus vulgaris HOM05D000706 ORTHO05D001554 6.2e-06 54.3 93 37.6
Aa31LG11G2890 Aethionema arabicum HOM05D000706 ORTHO05D001554 8.2e-06 53.9 77 42.9
FAN08G2870 Fragaria x ananassa HOM05D000706 ORTHO05D001554 8.2e-06 53.9 68 47.1
FAN18G3885 Fragaria x ananassa HOM05D000706 ORTHO05D001554 8.2e-06 53.9 68 47.1


User provided reference genes

Program Settings