Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc33.145 Carica papaya HOM05D008657 ORTHO05D010869 6.7e-187 658.3 419 100.0
Prupe.2G051600 Prunus persica HOM05D008657 ORTHO05D010869 2.8e-76 290.8 429 56.4
COL.COLO4_28899 Corchorus olitorius HOM05D008657 ORTHO05D010869 2.5e-72 277.7 328 64.3
Dinv02560 Davidia involucrata HOM05D008657 ORTHO05D010869 4.2e-72 276.9 425 48.0
RcHm_v2.0_Chr1g0330001 Rosa chinensis HOM05D008657 ORTHO05D010869 2.6e-69 267.7 333 58.3
CSS0003153 Camellia sinensis var. sinensis HOM05D000399 ORTHO05D000304 7.0e-67 259.6 398 45.7
Actinidia03250 Actinidia chinensis HOM05D008657 ORTHO05D010869 5.5e-64 250.0 376 55.6
CANSAT56G3352 Cannabis sativa HOM05D008657 ORTHO05D010869 4.7e-63 246.9 427 52.9
FAN10G0285 Fragaria x ananassa HOM05D008657 ORTHO05D010869 7.4e-61 239.6 333 61.3
C07p02910 Brassica napus HOM05D008657 ORTHO05D010869 1.8e-59 235.0 415 41.4
BolC7t40688H Brassica oleracea HOM05D008657 ORTHO05D010869 4.1e-59 233.8 415 41.2
TAR376G1027 Trochodendron aralioides HOM05D008657 ORTHO05D010869 4.1e-59 233.8 421 52.3
A07p01450 Brassica napus HOM05D008657 ORTHO05D010869 3.5e-58 230.7 413 41.2
Lj3C333T3 Lonicera japonica HOM05D008657 ORTHO05D010869 4.5e-58 230.3 390 52.3
BcaB03g16718 Brassica carinata HOM05D008657 ORTHO05D010869 1.3e-57 228.8 367 37.3
Aa31LG8G16330 Aethionema arabicum HOM05D008657 ORTHO05D010869 3.2e-56 224.2 344 52.6
BcaC06g36560 Brassica carinata HOM05D008657 ORTHO05D010869 1.2e-55 222.2 408 40.7
Carub.0003s3351 Capsella rubella HOM05D008657 ORTHO05D010869 1.2e-55 222.2 323 52.6
Sed0024339 Sechium edule HOM05D008657 ORTHO05D010869 2.1e-55 221.5 421 35.6
Sp3g32660 Schrenkiella parvula HOM05D008657 ORTHO05D010869 4.7e-55 220.3 323 54.5
BraA07t27942Z Brassica rapa HOM05D008657 ORTHO05D010869 2.3e-54 218.0 409 40.6
CsaV3_5G029290 Cucumis sativus L. HOM05D008657 ORTHO05D010869 4.0e-54 217.2 354 44.9
ClCG07G005030 Citrullus lanatus HOM05D008657 ORTHO05D010869 5.2e-54 216.9 344 44.8
AT2G19280 Arabidopsis thaliana HOM05D008657 ORTHO05D010869 1.5e-53 215.3 368 48.6
CARHR109740 Cardamine hirsuta HOM05D008657 ORTHO05D010869 6.3e-52 209.9 410 47.8
MELO3C011779.2 Cucumis melo HOM05D008657 ORTHO05D010869 4.1e-51 207.2 420 38.8
Thhalv10023028m.g Eutrema salsugineum HOM05D008657 ORTHO05D010869 1.0e-49 202.6 311 37.9
AL3G49010 Arabidopsis lyrata HOM05D008657 ORTHO05D010869 1.6e-47 195.3 332 50.0
Sc08g0000170 Simmondsia chinensis HOM05D008657 ORTHO05D010869 6.1e-47 193.4 325 40.0
Gohir.A06G171100 Gossypium hirsutum HOM05D008657 ORTHO05D010869 4.0e-46 190.7 322 57.1
PGR031G0953 Punica granatum HOM05D008657 ORTHO05D010869 6.8e-46 189.9 428 47.7
FAN06G4111 Fragaria x ananassa HOM05D008657 ORTHO05D010869 5.7e-45 186.8 335 54.6
Gorai.010G208900 Gossypium raimondii HOM05D008657 ORTHO05D010869 5.7e-45 186.8 321 56.4
FvH4_7g04580 Fragaria vesca HOM05D008657 ORTHO05D010869 7.5e-45 186.4 335 54.9
Thecc.10G128900 Theobroma cacao HOM05D008657 ORTHO05D010869 5.9e-42 176.8 357 50.4
Hund22231 Selenicereus undatus HOM05D008657 ORTHO05D010869 3.6e-39 167.5 324 47.8
FAN01G0963 Fragaria x ananassa HOM05D008657 ORTHO05D010869 1.1e-35 156.0 335 51.0
FAN03G0499 Fragaria x ananassa HOM05D008657 ORTHO05D010869 3.6e-31 141.0 145 49.0
DCAR_018350 Daucus carota HOM05D008657 ORTHO05D010869 3.1e-30 137.9 335 47.5
Oeu052822.1 Olea europaea HOM05D008657 ORTHO05D010869 3.4e-29 134.4 238 62.2
Lj3A303T33 Lonicera japonica HOM05D008657 ORTHO05D010869 2.5e-24 118.2 184 38.6
Gohir.D06G179000 Gossypium hirsutum HOM05D008657 ORTHO05D010869 3.3e-16 91.3 206 62.6
Eucgr.G03180 Eucalyptus grandis HOM05D008657 ORTHO05D010869 4.7e-15 87.4 90 48.9
Cfa000267 Carpinus fangiana HOM05D007956 ORTHO05D010152 3.2e-11 74.7 214 27.1
Haze_06747 Corylus avellana HOM05D007956 ORTHO05D010152 6.6e-09 67.0 202 26.7
HPP92_001299 Vanilla planifolia HOM05D007291 ORTHO05D009038 6.6e-09 67.0 165 28.5
TAR629G0629 Trochodendron aralioides HOM05D007956 ORTHO05D010152 1.9e-08 65.5 238 24.4
QL05p074803 Quercus lobata HOM05D007956 ORTHO05D010152 2.5e-08 65.1 209 25.4
CSS0040489 Camellia sinensis var. sinensis HOM05D005764 ORTHO05D006600 3.3e-08 64.7 205 23.9
ATR0618G019 Amborella trichopoda HOM05D006888 ORTHO05D008371 5.6e-08 63.9 172 27.3
COL.COLO4_06641 Corchorus olitorius HOM05D007956 ORTHO05D010152 5.6e-08 63.9 208 24.0
Thecc.06G215000 Theobroma cacao HOM05D007956 ORTHO05D010152 5.6e-08 63.9 209 24.4
CANSAT56G1376 Cannabis sativa HOM05D007956 ORTHO05D010152 7.3e-08 63.5 187 26.7
TPR.G14066 Trifolium pratense HOM05D007358 ORTHO05D009117 9.5e-08 63.2 204 23.5
ATR1127G166 Amborella trichopoda HOM05D007358 ORTHO05D009117 1.2e-07 62.8 162 26.5
SEGI_32122 Sequoiadendron giganteum HOM05D007291 ORTHO05D009038 1.1e-06 59.7 168 23.8
SGA_v2.0_scaffold122G33180 Striga asiatica HOM05D007358 ORTHO05D009117 1.1e-06 59.7 141 29.8
CiPaw.09G087900 Carya illinoinensis HOM05D007956 ORTHO05D010152 1.4e-06 59.3 201 24.4
SEGI_00853 Sequoiadendron giganteum HOM05D006931 ORTHO05D008782 1.4e-06 59.3 161 25.5
SEGI_12665 Sequoiadendron giganteum HOM05D007455 ORTHO05D009431 1.8e-06 58.9 161 26.1
Nn7g37112 Nelumbo nucifera HOM05D008657 ORTHO05D010869 5.2e-06 57.4 50 46.0
Sopen03g037190 Solanum pennellii HOM05D005764 ORTHO05D006600 5.2e-06 57.4 78 37.2
Lj3C325T0 Lonicera japonica HOM05D008657 ORTHO05D010869 8.9e-06 56.6 120 33.3
Solyc03g118280.1 Solanum lycopersicum HOM05D005764 ORTHO05D006600 8.9e-06 56.6 157 28.7


User provided reference genes

Program Settings