Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc33.128 Carica papaya HOM05D006565 ORTHO05D008717 1.6e-42 175.6 84 100.0
QL04p048612 Quercus lobata HOM05D006565 ORTHO05D008717 4.1e-35 151.0 82 85.4
MELO3C012330.2 Cucumis melo HOM05D006565 ORTHO05D008717 1.2e-34 149.4 82 84.1
CsaV3_5G035170 Cucumis sativus L. HOM05D006565 ORTHO05D008717 1.2e-34 149.4 82 84.1
Duzib114G0050 Durio zibethinus HOM05D006565 ORTHO05D008717 1.2e-34 149.4 82 85.4
CiPaw.14G036000 Carya illinoinensis HOM05D006565 ORTHO05D008717 1.6e-34 149.1 82 85.4
Manes.10G059200 Manihot esculenta HOM05D006565 ORTHO05D008717 1.6e-34 149.1 82 84.1
Thecc.10G119100 Theobroma cacao HOM05D006565 ORTHO05D008717 1.6e-34 149.1 82 84.1
Ciclev10015763m.g Citrus clementina HOM05D006565 ORTHO05D008717 2.7e-34 148.3 82 84.1
Dinv06042 Davidia involucrata HOM05D006565 ORTHO05D008717 3.5e-34 147.9 82 81.7
Eucgr.G02667 Eucalyptus grandis HOM05D006565 ORTHO05D008717 3.5e-34 147.9 82 82.9
ClCG05G021990 Citrullus lanatus HOM05D006565 ORTHO05D008717 4.6e-34 147.5 82 82.9
Sabra10G0190700 Salix brachista HOM05D006565 ORTHO05D008717 4.6e-34 147.5 82 80.5
Actinidia34736 Actinidia chinensis HOM05D006565 ORTHO05D008717 1.7e-33 145.6 82 80.5
Lalb_Chr06g0169851 Lupinus albus HOM05D006565 ORTHO05D008717 1.7e-33 145.6 82 81.7
Potri.010G243900 Populus trichocarpa HOM05D006565 ORTHO05D008717 1.7e-33 145.6 82 80.5
Rhsim09G0140500 Rhododendron simsii HOM05D006565 ORTHO05D008717 2.3e-33 145.2 82 81.7
RhsimUnG0215000 Rhododendron simsii HOM05D006565 ORTHO05D008717 2.3e-33 145.2 82 81.7
ATR0697G221 Amborella trichopoda HOM05D006565 ORTHO05D008717 3.0e-33 144.8 82 80.5
Glyma.20G195000 Glycine max HOM05D006565 ORTHO05D008717 3.9e-33 144.4 82 79.3
FvH4_1g27810 Fragaria vesca HOM05D006565 ORTHO05D008717 5.0e-33 144.1 82 79.3
MD07G1062700 Malus domestica HOM05D006565 ORTHO05D008717 6.6e-33 143.7 82 81.7
Nn2g14368 Nelumbo nucifera HOM05D006565 ORTHO05D008717 6.6e-33 143.7 82 79.3
GSVIVG01034599001 Vitis vinifera HOM05D006565 ORTHO05D008717 6.6e-33 143.7 82 80.5
CDE06G1733 Ceratophyllum demersum HOM05D006565 ORTHO05D008717 8.6e-33 143.3 82 80.5
Ca_10426_v3 Cicer arietinum L. HOM05D006565 ORTHO05D008717 8.6e-33 143.3 82 79.3
TAR636G0179 Trochodendron aralioides HOM05D006565 ORTHO05D008717 8.6e-33 143.3 82 80.5
Lj5g0019410 Lotus japonicus HOM05D006565 ORTHO05D008717 1.1e-32 142.9 82 79.3
Sed0004638 Sechium edule HOM05D006565 ORTHO05D008717 1.9e-32 142.1 82 80.5
FvH4_7g05460 Fragaria vesca HOM05D006565 ORTHO05D008717 2.5e-32 141.7 82 78.0
COL.COLO4_10008 Corchorus olitorius HOM05D006565 ORTHO05D008717 3.3e-32 141.4 82 80.5
Aqoxy1G00616 Aquilegia oxysepala HOM05D006565 ORTHO05D008717 4.3e-32 141.0 82 80.5
Dinv03812 Davidia involucrata HOM05D006565 ORTHO05D008717 5.6e-32 140.6 82 80.5
Gohir.A05G286300 Gossypium hirsutum HOM05D006565 ORTHO05D008717 5.6e-32 140.6 82 80.5
Gorai.009G302300 Gossypium raimondii HOM05D006565 ORTHO05D008717 5.6e-32 140.6 82 80.5
arahy.Tifrunner.gnm1.ann1.51BCJ8 Arachis hypogaea HOM05D006565 ORTHO05D008717 7.3e-32 140.2 82 79.3
arahy.Tifrunner.gnm1.ann1.V0HLME Arachis hypogaea HOM05D006565 ORTHO05D008717 7.3e-32 140.2 82 79.3
Sc07g0003130 Simmondsia chinensis HOM05D006565 ORTHO05D008717 7.3e-32 140.2 82 78.0
Nitab4.5_0001781g0210 Nicotiana tabacum HOM05D006565 ORTHO05D008717 9.5e-32 139.8 82 80.5
Peaxi162Scf00120g01317 Petunia axillaris HOM05D006565 ORTHO05D008717 1.2e-31 139.4 82 79.3
RcHm_v2.0_Chr1g0332191 Rosa chinensis HOM05D006565 ORTHO05D008717 1.2e-31 139.4 82 79.3
Migut.F00832 Erythranthe guttata HOM05D006565 ORTHO05D008717 1.6e-31 139.0 82 81.7
PSO339G2240 Papaver somniferum HOM05D006565 ORTHO05D008717 1.6e-31 139.0 82 79.3
Potri.008G015201 Populus trichocarpa HOM05D006565 ORTHO05D008717 2.1e-31 138.7 82 76.8
Sopen11g002320 Solanum pennellii HOM05D006565 ORTHO05D008717 2.1e-31 138.7 82 78.0
Atru.chr12.1084 Acer truncatum HOM05D006565 ORTHO05D008717 2.8e-31 138.3 82 79.3
FAN10G3234 Fragaria x ananassa HOM05D006565 ORTHO05D008717 2.8e-31 138.3 82 76.8
Gohir.D05G287300 Gossypium hirsutum HOM05D006565 ORTHO05D008717 2.8e-31 138.3 82 79.3
Lj3A921T38 Lonicera japonica HOM05D006565 ORTHO05D008717 2.8e-31 138.3 82 78.0
Cc02_g09290 Coffea canephora HOM05D006565 ORTHO05D008717 3.6e-31 137.9 82 76.8
Solyc11g006420.2 Solanum lycopersicum HOM05D006565 ORTHO05D008717 3.6e-31 137.9 82 78.0
FAN06G1903 Fragaria x ananassa HOM05D006565 ORTHO05D008717 4.7e-31 137.5 82 76.8
FAN10G4168 Fragaria x ananassa HOM05D006565 ORTHO05D008717 4.7e-31 137.5 82 76.8
FAN01G3085 Fragaria x ananassa HOM05D006565 ORTHO05D008717 6.2e-31 137.1 82 76.8
Os03g0648900 Oryza sativa ssp. japonica HOM05D006565 ORTHO05D008717 1.1e-30 136.3 82 76.8
vmacro10331 Vaccinium macrocarpon HOM05D006565 ORTHO05D008717 1.4e-30 136.0 94 72.3
MBI05_g36782_MAGBIO Magnolia biondii HOM05D006565 ORTHO05D008717 2.3e-30 135.2 82 75.6
Prupe.2G074100 Prunus persica HOM05D006565 ORTHO05D008717 2.3e-30 135.2 83 78.3
TPR.G10259 Trifolium pratense HOM05D006565 ORTHO05D008717 2.3e-30 135.2 82 74.4
PGSC0003DMG400001988 Solanum tuberosum HOM05D006565 ORTHO05D008717 3.1e-30 134.8 82 76.8
CANSAT56G1291 Cannabis sativa HOM05D006565 ORTHO05D008717 4.0e-30 134.4 82 75.6
HPP92_013938 Vanilla planifolia HOM05D006565 ORTHO05D008717 4.0e-30 134.4 82 78.0
THA.LOC104801973 Tarenaya hassleriana HOM05D006565 ORTHO05D008717 5.2e-30 134.0 82 78.0
HanXRQChr08g0217341 Helianthus annuus HOM05D006565 ORTHO05D008717 6.8e-30 133.7 82 76.8
Prupe.2G073700 Prunus persica HOM05D006565 ORTHO05D008717 6.8e-30 133.7 83 78.3
SGA_v2.0_scaffold90G27708 Striga asiatica HOM05D006565 ORTHO05D008717 6.8e-30 133.7 82 76.8
CAN.G143.52 Capsicum annuum HOM05D006565 ORTHO05D008717 1.2e-29 132.9 82 75.6
ECA233G2794 Erigeron canadensis HOM05D006565 ORTHO05D008717 1.2e-29 132.9 82 76.8
MSTRG.9025 Avicennia marina HOM05D006565 ORTHO05D008717 1.5e-29 132.5 82 74.4
BolC3t14938H Brassica oleracea HOM05D006565 ORTHO05D008717 1.5e-29 132.5 83 75.9
A03p21520 Brassica napus HOM05D006565 ORTHO05D008717 2.0e-29 132.1 83 77.1
BraA03t11388Z Brassica rapa HOM05D006565 ORTHO05D008717 2.0e-29 132.1 83 77.1
TWI15G0448 Tripterygium wilfordii HOM05D006565 ORTHO05D008717 2.0e-29 132.1 82 76.8
Zm00001eb218510 Zea mays HOM05D006565 ORTHO05D008717 2.0e-29 132.1 82 74.4
PGSC0003DMG400014108 Solanum tuberosum HOM05D006565 ORTHO05D008717 2.6e-29 131.7 82 75.6
Psat6g171600 Pisum sativum HOM05D006565 ORTHO05D008717 3.4e-29 131.3 82 73.2
Medtr1g090380 Medicago truncatula HOM05D006565 ORTHO05D008717 4.4e-29 131.0 82 74.4
AUR62034160 Chenopodium quinoa HOM05D006565 ORTHO05D008717 7.5e-29 130.2 82 74.4
EL10Ac4g08734 Beta vulgaris HOM05D006565 ORTHO05D008717 1.3e-28 129.4 82 72.0
Thhalv10016992m.g Eutrema salsugineum HOM05D006565 ORTHO05D008717 1.7e-28 129.0 83 75.9
FAN21G0259 Fragaria x ananassa HOM05D006565 ORTHO05D008717 2.9e-28 128.3 79 73.4
VMungo0720G0186 Vigna mungo HOM05D006565 ORTHO05D008717 3.7e-28 127.9 104 61.5
Carub.0004s2066 Capsella rubella HOM05D006565 ORTHO05D008717 4.9e-28 127.5 83 72.3
AUR62014278 Chenopodium quinoa HOM05D006565 ORTHO05D008717 4.9e-28 127.5 82 74.4
Sp4g21020 Schrenkiella parvula HOM05D006565 ORTHO05D008717 4.9e-28 127.5 83 74.7
CARHR133350 Cardamine hirsuta HOM05D006565 ORTHO05D008717 8.3e-28 126.7 85 72.9
Hma1.2p1_0098F.1_g048200 Hydrangea macrophylla HOM05D006565 ORTHO05D008717 8.3e-28 126.7 69 82.6
C03p25510 Brassica napus HOM05D006565 ORTHO05D008717 1.1e-27 126.3 83 74.7
HanXRQChr02g0049321 Helianthus annuus HOM05D006565 ORTHO05D008717 1.4e-27 125.9 82 72.0
Lsat_1_v5_gn_8_21800 Lactuca sativa HOM05D006565 ORTHO05D008717 2.4e-27 125.2 82 72.0
Haze_03436 Corylus avellana HOM05D006565 ORTHO05D008717 2.0e-26 122.1 68 83.8
AL4G35960 Arabidopsis lyrata HOM05D006565 ORTHO05D008717 2.7e-26 121.7 83 68.7
AT2G38680 Arabidopsis thaliana HOM05D006565 ORTHO05D008717 2.7e-26 121.7 83 68.7
Lj3A922G55 Lonicera japonica HOM05D006565 ORTHO05D008717 6.0e-26 120.6 68 80.9
AagrBONN_evm.TU.Sc2ySwM_228.2835 Anthoceros agrestis HOM05D006565 ORTHO05D008717 3.9e-25 117.9 84 66.7
SEGI_36612 Sequoiadendron giganteum HOM05D006565 ORTHO05D008717 8.6e-25 116.7 85 68.2
Pp3c1_24570 Physcomitrium patens HOM05D006565 ORTHO05D008717 5.6e-24 114.0 82 65.9
Hund06810 Selenicereus undatus HOM05D006565 ORTHO05D008717 5.6e-24 114.0 70 74.3
Mapoly0082s0075 Marchantia polymorpha HOM05D006565 ORTHO05D008717 4.0e-22 107.8 83 62.7
SMO367G1082 Selaginella moellendorffii HOM05D006565 ORTHO05D008717 8.9e-22 106.7 84 59.5
CSS0049814 Camellia sinensis var. sinensis HOM05D006565 ORTHO05D008717 1.2e-21 106.3 57 84.2
Phvul.007G137100 Phaseolus vulgaris HOM05D006565 ORTHO05D008717 1.3e-20 102.8 82 61.0
Oeu009252.1 Olea europaea HOM05D006565 ORTHO05D008717 3.9e-17 91.3 59 71.2
MBI15_g31580_MAGBIO Magnolia biondii HOM05D001433 ORTHO05D011977 1.8e-14 82.4 59 66.1
MBI08_g05402_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 2.4e-14 82.0 56 69.6
RhsimUnG0214900 Rhododendron simsii HOM05D006565 ORTHO05D008717 2.7e-10 68.6 37 83.8
MBI17_g02193_MAGBIO Magnolia biondii HOM05D006565 ORTHO05D011977 1.3e-09 66.2 44 72.7
CBR_g36829 Chara braunii HOM05D006565 ORTHO05D001468 1.7e-09 65.9 35 77.1
MBI06_g14037_MAGBIO Magnolia biondii HOM05D001433 ORTHO05D011977 8.1e-07 57.0 42 64.3


User provided reference genes

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