Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc321.2 Carica papaya HOM05D003548 ORTHO05D004066 3.7e-154 548.5 346 100.0
QL02p032544 Quercus lobata HOM05D003548 ORTHO05D004066 9.6e-46 188.3 144 69.4
CSS0019271 Camellia sinensis var. sinensis HOM05D003548 ORTHO05D004066 3.6e-45 186.4 141 70.9
CSS0042414 Camellia sinensis var. sinensis HOM05D003548 ORTHO05D004066 3.6e-45 186.4 141 70.9
Dinv38885 Davidia involucrata HOM05D003548 ORTHO05D004066 6.2e-45 185.7 143 70.6
MD14G1116300 Malus domestica HOM05D003548 ORTHO05D004066 1.2e-43 181.4 138 68.1
MD06G1096100 Malus domestica HOM05D003548 ORTHO05D004066 2.2e-42 177.2 138 66.7
Prupe.5G110700 Prunus persica HOM05D003548 ORTHO05D004066 4.9e-42 176.0 138 68.1
Dinv37570 Davidia involucrata HOM05D003548 ORTHO05D004066 8.4e-42 175.3 143 68.5
RcHm_v2.0_Chr7g0196081 Rosa chinensis HOM05D003548 ORTHO05D004066 8.4e-42 175.3 139 69.8
FAN13G1218 Fragaria x ananassa HOM05D003548 ORTHO05D004066 3.2e-41 173.3 138 65.9
FvH4_5g03650 Fragaria vesca HOM05D003548 ORTHO05D004066 4.2e-41 172.9 138 65.9
FAN04G1462 Fragaria x ananassa HOM05D003548 ORTHO05D004066 5.4e-41 172.6 138 65.9
CANSAT21G0595 Cannabis sativa HOM05D003548 ORTHO05D004066 7.1e-41 172.2 138 71.7
FAN13G0102 Fragaria x ananassa HOM05D003548 ORTHO05D004066 1.2e-40 171.4 138 65.2
FAN04G2241 Fragaria x ananassa HOM05D003548 ORTHO05D004066 4.6e-40 169.5 138 65.2
FAN18G1037 Fragaria x ananassa HOM05D003548 ORTHO05D004066 1.0e-39 168.3 138 65.2
Phvul.002G294600 Phaseolus vulgaris HOM05D003548 ORTHO05D004066 2.1e-37 160.6 144 64.6
Cc08_g15520 Coffea canephora HOM05D003548 ORTHO05D004066 2.8e-37 160.2 141 62.4
Medtr8g099105 Medicago truncatula HOM05D003548 ORTHO05D004066 3.7e-37 159.8 147 61.9
Sabra01G0072500 Salix brachista HOM05D003548 ORTHO05D004066 3.7e-37 159.8 144 65.3
Thecc.03G289200 Theobroma cacao HOM05D003548 ORTHO05D004066 3.7e-37 159.8 153 58.2
Potri.001G097200 Populus trichocarpa HOM05D003548 ORTHO05D004066 1.4e-36 157.9 144 64.6
MELO3C005727.2 Cucumis melo HOM05D003548 ORTHO05D004066 3.1e-36 156.8 142 62.0
ClCG01G002150 Citrullus lanatus HOM05D003548 ORTHO05D004066 4.0e-36 156.4 142 61.3
Hma1.2p1_0216F.1_g091270 Hydrangea macrophylla HOM05D003548 ORTHO05D004066 5.3e-36 156.0 149 61.1
Sp2g00590 Schrenkiella parvula HOM05D003548 ORTHO05D004066 6.9e-36 155.6 142 64.1
Atru.chr9.2080 Acer truncatum HOM05D003548 ORTHO05D004066 9.0e-36 155.2 142 62.0
Duzib205G0585 Durio zibethinus HOM05D003548 ORTHO05D004066 9.0e-36 155.2 142 59.9
CsaV3_5G002270 Cucumis sativus L. HOM05D003548 ORTHO05D004066 1.2e-35 154.8 142 61.3
DCAR_008526 Daucus carota HOM05D003548 ORTHO05D004066 4.5e-35 152.9 141 63.1
TWI81G0889 Tripterygium wilfordii HOM05D003548 ORTHO05D004066 4.5e-35 152.9 143 60.8
Thhalv10023333m.g Eutrema salsugineum HOM05D003548 ORTHO05D004066 5.8e-35 152.5 141 64.5
Nn1g01756 Nelumbo nucifera HOM05D003548 ORTHO05D004066 5.8e-35 152.5 137 63.5
Gohir.D09G185600 Gossypium hirsutum HOM05D003548 ORTHO05D004066 9.9e-35 151.8 142 58.5
Gorai.006G208300 Gossypium raimondii HOM05D003548 ORTHO05D004066 9.9e-35 151.8 142 58.5
TPR.G3387 Trifolium pratense HOM05D000059 ORTHO05D004066 9.9e-35 151.8 143 60.1
Haze_08718 Corylus avellana HOM05D003548 ORTHO05D004066 2.2e-34 150.6 148 59.5
Peaxi162Scf00074g00156 Petunia axillaris HOM05D003548 ORTHO05D004066 3.8e-34 149.8 143 62.2
COL.COLO4_08334 Corchorus olitorius HOM05D003548 ORTHO05D004066 8.4e-34 148.7 142 56.3
Gohir.A09G191100 Gossypium hirsutum HOM05D003548 ORTHO05D004066 1.9e-33 147.5 142 57.7
Glyma.01G223400 Glycine max HOM05D003548 ORTHO05D004066 2.5e-33 147.1 143 62.9
Cfa012267 Carpinus fangiana HOM05D003548 ORTHO05D004066 9.3e-33 145.2 143 58.7
Glyma.05G213300 Glycine max HOM05D003548 ORTHO05D004066 9.3e-33 145.2 144 59.7
Eucgr.E00807 Eucalyptus grandis HOM05D003548 ORTHO05D004066 1.6e-32 144.4 144 59.7
TWI60G0243 Tripterygium wilfordii HOM05D003548 ORTHO05D004066 6.0e-32 142.5 143 55.2
TWI15G1126 Tripterygium wilfordii HOM05D003548 ORTHO05D004066 7.9e-32 142.1 142 55.6
CAN.G532.68 Capsicum annuum HOM05D003548 ORTHO05D004066 1.8e-31 141.0 141 58.9
THA.LOC104809354 Tarenaya hassleriana HOM05D003548 ORTHO05D004066 3.0e-31 140.2 143 59.4
Manes.02G014900 Manihot esculenta HOM05D003548 ORTHO05D004066 3.9e-31 139.8 141 56.0
Sed0010954 Sechium edule HOM05D003548 ORTHO05D004066 5.1e-31 139.4 139 59.0
Sed0003878 Sechium edule HOM05D003548 ORTHO05D004066 6.7e-31 139.0 144 57.6
Oeu059583.1 Olea europaea HOM05D003548 ORTHO05D004066 3.3e-30 136.7 145 55.9
CiPaw.12G087100 Carya illinoinensis HOM05D003548 ORTHO05D004066 9.6e-30 135.2 127 56.7
Gorai.003G083700 Gossypium raimondii HOM05D003548 ORTHO05D004066 1.6e-29 134.4 142 53.5
Ca_10964_v3 Cicer arietinum L. HOM05D003548 ORTHO05D004066 2.8e-29 133.7 143 55.2
Gohir.A02G103700 Gossypium hirsutum HOM05D003548 ORTHO05D004066 3.7e-29 133.3 142 52.8
Glyma.08G019800 Glycine max HOM05D003548 ORTHO05D004066 6.2e-29 132.5 144 56.9
Potri.003G134200 Populus trichocarpa HOM05D003548 ORTHO05D004066 6.2e-29 132.5 142 54.9
BcaC04g22535 Brassica carinata HOM05D003548 ORTHO05D004066 8.2e-29 132.1 156 59.6
AT1G64140 Arabidopsis thaliana HOM05D003548 ORTHO05D004066 2.4e-28 130.6 148 57.4
Sopen08g030060 Solanum pennellii HOM05D003548 ORTHO05D004066 2.4e-28 130.6 143 54.5
AL2G10890 Arabidopsis lyrata HOM05D003548 ORTHO05D004066 3.1e-28 130.2 148 58.1
Oeu042369.1 Olea europaea HOM05D003548 ORTHO05D004066 3.1e-28 130.2 143 55.9
BcaC04g22534 Brassica carinata HOM05D003548 ORTHO05D004066 4.0e-28 129.8 141 61.7
C09p18070 Brassica napus HOM05D003548 ORTHO05D004066 4.0e-28 129.8 141 61.7
BolC9t54704H Brassica oleracea HOM05D003548 ORTHO05D004066 4.0e-28 129.8 141 61.7
Oeu042375.2 Olea europaea HOM05D003548 ORTHO05D004066 5.3e-28 129.4 143 55.9
Gohir.D03G080300 Gossypium hirsutum HOM05D003548 ORTHO05D004066 6.9e-28 129.0 142 52.1
ECA246G0635 Erigeron canadensis HOM05D003548 ORTHO05D004066 9.0e-28 128.6 139 55.4
Carub.0002s0067 Capsella rubella HOM05D003548 ORTHO05D004066 1.5e-27 127.9 148 59.5
Aqoxy5G04044 Aquilegia oxysepala HOM05D003548 ORTHO05D004066 2.6e-27 127.1 125 60.0
Migut.A00697 Erythranthe guttata HOM05D003548 ORTHO05D004066 5.8e-27 125.9 143 53.8
Ciclev10019140m.g Citrus clementina HOM05D003548 ORTHO05D004066 1.0e-26 125.2 142 52.1
Duzib084G0464 Durio zibethinus HOM05D003548 ORTHO05D004066 1.3e-26 124.8 142 52.8
HanXRQChr17g0533931 Helianthus annuus HOM05D003548 ORTHO05D004066 1.3e-26 124.8 130 54.6
CiPaw.11G126900 Carya illinoinensis HOM05D003548 ORTHO05D004066 4.9e-26 122.9 146 52.1
VMungo0251G1700 Vigna mungo HOM05D003548 ORTHO05D004066 4.9e-26 122.9 144 52.1
GSVIVG01003094001 Vitis vinifera HOM05D003548 ORTHO05D004066 6.5e-26 122.5 96 70.8
Psat7g029120 Pisum sativum HOM05D003548 ORTHO05D004066 2.5e-25 120.6 143 51.7
PGSC0003DMG400005830 Solanum tuberosum HOM05D003548 ORTHO05D004066 2.5e-25 120.6 143 52.4
BcaB07g31439 Brassica carinata HOM05D003548 ORTHO05D008486 4.2e-25 119.8 137 58.4
DCAR_006852 Daucus carota HOM05D003548 ORTHO05D004066 9.3e-25 118.6 142 53.5
A09p14120 Brassica napus HOM05D003548 ORTHO05D004066 2.1e-24 117.5 148 54.1
BraA09t37059Z Brassica rapa HOM05D003548 ORTHO05D004066 2.1e-24 117.5 148 54.1
arahy.Tifrunner.gnm1.ann1.59PT6M Arachis hypogaea HOM05D003548 ORTHO05D004066 3.5e-24 116.7 143 50.3
Duzib068G0600 Durio zibethinus HOM05D003548 ORTHO05D004066 3.5e-24 116.7 116 57.8
arahy.Tifrunner.gnm1.ann1.36D870 Arachis hypogaea HOM05D003548 ORTHO05D004066 4.6e-24 116.3 143 50.3
VMungo1215G2254 Vigna mungo HOM05D003548 ORTHO05D004066 4.6e-24 116.3 131 56.5
SalBow1G6595 Salvia bowleyana HOM05D003548 ORTHO05D004066 1.8e-23 114.4 140 50.7
GSVIVG01019448001 Vitis vinifera HOM05D003548 ORTHO05D004066 1.8e-23 114.4 141 48.2
Solyc08g081760.3 Solanum lycopersicum HOM05D003548 ORTHO05D004066 2.3e-23 114.0 143 50.3
AUR62019776 Chenopodium quinoa HOM05D003548 ORTHO05D004066 3.0e-23 113.6 141 49.6
SalBow1G7748 Salvia bowleyana HOM05D003548 ORTHO05D004066 6.7e-23 112.5 140 50.7
MBI06_g29318_MAGBIO Magnolia biondii HOM05D003548 ORTHO05D004066 1.9e-22 110.9 141 54.6
Sopen08g004030 Solanum pennellii HOM05D003548 ORTHO05D004066 9.7e-22 108.6 143 49.0
Solyc08g008180.3 Solanum lycopersicum HOM05D003548 ORTHO05D004066 1.3e-21 108.2 143 48.3
PGR031G0552 Punica granatum HOM05D003548 ORTHO05D004066 2.2e-21 107.5 141 45.4
ECA233G1322 Erigeron canadensis HOM05D003548 ORTHO05D004066 2.8e-21 107.1 100 62.0
MBI07_g38645_MAGBIO Magnolia biondii HOM05D003548 ORTHO05D004066 2.8e-21 107.1 141 50.4
TAR636G0920 Trochodendron aralioides HOM05D003548 ORTHO05D004066 2.8e-21 107.1 141 45.4
GSVIVG01028755001 Vitis vinifera HOM05D003548 ORTHO05D004066 6.3e-21 105.9 114 53.5
Lj4g0009292 Lotus japonicus HOM05D003548 ORTHO05D004066 1.8e-20 104.4 143 47.6
TAR629G2865 Trochodendron aralioides HOM05D003548 ORTHO05D004066 5.3e-20 102.8 137 44.5
HanXRQChr06g0166281 Helianthus annuus HOM05D003548 ORTHO05D004066 9.0e-20 102.1 99 58.6
Nitab4.5_0002944g0150 Nicotiana tabacum HOM05D003548 ORTHO05D004066 1.2e-19 101.7 143 49.7
PSO135G0411 Papaver somniferum HOM05D003548 ORTHO05D004066 2.0e-19 100.9 143 49.0
unitig_32.g11608 Utricularia gibba HOM05D003548 ORTHO05D004066 2.0e-19 100.9 139 46.0
Sabra03G0096600 Salix brachista HOM05D003548 ORTHO05D004066 5.9e-19 99.4 141 44.0
Phvul.002G161400 Phaseolus vulgaris HOM05D003548 ORTHO05D004066 1.3e-18 98.2 122 53.3
Peaxi162Scf00102g01614 Petunia axillaris HOM05D003548 ORTHO05D004066 5.0e-18 96.3 160 45.0
Lalb_Chr16g0390341 Lupinus albus HOM05D003548 ORTHO05D004066 6.5e-18 95.9 143 44.1
Aa31LG2G1190 Aethionema arabicum HOM05D003548 ORTHO05D004066 1.4e-17 94.7 153 44.4
PSO384G2366 Papaver somniferum HOM05D003548 ORTHO05D004066 7.2e-17 92.4 143 46.2
Rhsim02G0237200 Rhododendron simsii HOM05D003548 ORTHO05D004066 3.6e-16 90.1 149 45.0
Oeu063042.1 Olea europaea HOM05D003548 ORTHO05D004066 7.9e-16 89.0 140 42.1
AUR62010777 Chenopodium quinoa HOM05D003548 ORTHO05D004066 2.3e-15 87.4 141 42.6
CDE10G0521 Ceratophyllum demersum HOM05D003548 ORTHO05D004066 3.9e-15 86.7 135 48.1
PGR042G3215 Punica granatum HOM05D003548 ORTHO05D004066 3.9e-15 86.7 134 42.5
PGSC0003DMG400012172 Solanum tuberosum HOM05D003548 ORTHO05D004066 5.1e-15 86.3 143 42.0
SGA_v2.0_scaffold96G28999 Striga asiatica HOM05D003548 ORTHO05D004066 5.1e-15 86.3 129 45.0
MSTRG.25643 Avicennia marina HOM05D003548 ORTHO05D004066 1.1e-14 85.1 143 40.6
Dinv28355 Davidia involucrata HOM05D003548 ORTHO05D004066 2.5e-14 84.0 123 45.5
PSO063G3847 Papaver somniferum HOM05D003548 ORTHO05D004066 7.4e-14 82.4 137 38.7
Aqoxy7G00221 Aquilegia oxysepala HOM05D003548 ORTHO05D004066 1.7e-13 81.3 127 44.1
BcaC04g22655 Brassica carinata HOM05D003548 ORTHO05D004066 1.7e-13 81.3 87 57.5
C09p17010 Brassica napus HOM05D003548 ORTHO05D004066 1.7e-13 81.3 87 57.5
PSO170G6721 Papaver somniferum HOM05D003548 ORTHO05D004066 2.2e-13 80.9 137 37.2
Nitab4.5_0005339g0010 Nicotiana tabacum HOM05D003548 ORTHO05D004066 6.3e-13 79.3 143 42.0
Sc01g0009980 Simmondsia chinensis HOM05D003548 ORTHO05D004066 6.9e-12 75.9 152 34.2
EL10Ac5g12854 Beta vulgaris HOM05D003548 ORTHO05D004066 1.5e-11 74.7 87 49.4
BcaB07g31525 Brassica carinata HOM05D003548 ORTHO05D004066 3.4e-11 73.6 145 41.4
unitig_748.g7420 Utricularia gibba HOM05D003548 ORTHO05D004066 3.4e-11 73.6 86 51.2
CDE02G2034 Ceratophyllum demersum HOM05D003548 ORTHO05D004066 4.5e-11 73.2 145 39.3
MSTRG.11944 Avicennia marina HOM05D003548 ORTHO05D004066 5.9e-11 72.8 143 41.3
Ah.12g052120 Amaranthus hybridus HOM05D000265 ORTHO05D000161 2.2e-10 70.9 133 39.1
BolC9t54599H Brassica oleracea HOM05D003548 ORTHO05D004066 2.2e-10 70.9 87 54.0
Eucgr.D01792 Eucalyptus grandis HOM05D003548 ORTHO05D004066 2.2e-10 70.9 98 49.0
Dinv35294 Davidia involucrata HOM05D003548 ORTHO05D004066 2.5e-09 67.4 141 37.6
CARHR046800 Cardamine hirsuta HOM05D003548 ORTHO05D004066 4.2e-09 66.6 107 48.6
A09p14950 Brassica napus HOM05D003548 ORTHO05D004066 2.7e-08 63.9 180 35.6
Actinidia08610 Actinidia chinensis HOM05D003548 ORTHO05D004066 6.1e-08 62.8 102 45.1
BraA09t37140Z Brassica rapa HOM05D003548 ORTHO05D004066 7.9e-08 62.4 180 35.6
HPP92_006483 Vanilla planifolia HOM05D003548 ORTHO05D004066 2.3e-07 60.8 99 45.5
BcaB04g17164 Brassica carinata HOM05D003870 ORTHO05D004567 1.1e-06 58.5 96 49.0
CSS0041240 Camellia sinensis var. sinensis HOM05D003548 ORTHO05D004066 1.5e-06 58.2 96 42.7
CSS0049608 Camellia sinensis var. sinensis HOM05D003548 ORTHO05D004066 1.5e-06 58.2 96 42.7


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