Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc3206.1 Carica papaya HOM05D000004 ORTHO05D000563 6.8e-50 200.3 96 100.0
Cpa.g.sc0.24 Carica papaya HOM05D000004 ORTHO05D000563 4.7e-19 97.8 95 57.9
Cpa.g.sc43.49 Carica papaya HOM05D000004 ORTHO05D119126 2.2e-16 89.0 58 74.1
Cpa.g.sc186.6 Carica papaya HOM05D000004 ORTHO05D000563 1.7e-13 79.3 58 69.0
Cpa.g.sc23.40 Carica papaya HOM05D000004 ORTHO05D000563 3.0e-13 78.6 102 47.1
Cpa.g.sc69.22 Carica papaya HOM05D000004 ORTHO05D011645 3.9e-13 78.2 55 70.9
PGR031G2848 Punica granatum HOM05D000004 ORTHO05D000002 3.6e-11 71.6 38 76.3
PGR083G2791 Punica granatum HOM05D000004 ORTHO05D000563 3.6e-11 71.6 38 76.3
PGR142G1811 Punica granatum HOM05D000004 ORTHO05D000002 3.6e-11 71.6 38 76.3
PGR004G2150 Punica granatum HOM05D000004 ORTHO05D000002 4.7e-11 71.2 38 76.3
PGR119G1621 Punica granatum HOM05D000004 ORTHO05D000563 6.2e-11 70.9 38 73.7
PGR004G1708 Punica granatum HOM05D000004 ORTHO05D000563 1.1e-10 70.1 38 73.7
PGR102G1518 Punica granatum HOM05D000004 ORTHO05D000563 1.1e-10 70.1 38 76.3
Cpa.g.sc31.61 Carica papaya HOM05D000004 ORTHO05D000563 1.4e-10 69.7 38 71.1
PGR102G0770 Punica granatum HOM05D000004 ORTHO05D000002 1.8e-10 69.3 38 71.1
PGR025G0001 Punica granatum HOM05D000004 ORTHO05D000002 2.4e-10 68.9 38 71.1
PGR044G0113 Punica granatum HOM05D000004 ORTHO05D000563 2.4e-10 68.9 38 71.1
PGR044G1656 Punica granatum HOM05D000004 ORTHO05D000563 2.4e-10 68.9 38 71.1
PGR044G2607 Punica granatum HOM05D000004 ORTHO05D000002 2.4e-10 68.9 38 71.1
PGR052G0001 Punica granatum HOM05D000004 ORTHO05D000002 2.4e-10 68.9 38 71.1
PGR115G0001 Punica granatum HOM05D000004 ORTHO05D000002 2.4e-10 68.9 38 71.1
PGR119G1513 Punica granatum HOM05D000004 ORTHO05D000002 2.4e-10 68.9 38 71.1
PGR119G1563 Punica granatum HOM05D000004 ORTHO05D000563 2.4e-10 68.9 38 71.1
PGR139G0001 Punica granatum HOM05D000004 ORTHO05D000002 2.4e-10 68.9 38 71.1
THA.LOC109116513 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 2.4e-10 68.9 38 71.1
THA.LOC109116955 Tarenaya hassleriana HOM05D000004 ORTHO05D000563 2.4e-10 68.9 38 71.1
THA.LOC109117128 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 2.4e-10 68.9 38 71.1
PGR004G1184 Punica granatum HOM05D000004 ORTHO05D000563 3.1e-10 68.6 38 71.1
PGR004G2489 Punica granatum HOM05D000004 ORTHO05D000002 4.0e-10 68.2 38 71.1
Cpa.g.sc2455.1 Carica papaya HOM05D000004 ORTHO05D000563 5.2e-10 67.8 38 68.4
PGR102G2704 Punica granatum HOM05D000004 ORTHO05D000002 5.2e-10 67.8 38 71.1
PGR083G1623 Punica granatum HOM05D000004 ORTHO05D000002 6.8e-10 67.4 38 68.4
Cpa.g.sc778.1 Carica papaya HOM05D000004 ORTHO05D000563 8.9e-10 67.0 38 68.4
Cpa.g.sc92.118 Carica papaya HOM05D000004 ORTHO05D000563 8.9e-10 67.0 38 71.1
Cpa.g.sc97.21 Carica papaya HOM05D000004 ORTHO05D000563 1.5e-09 66.2 38 63.2
CANSAT25G3060 Cannabis sativa HOM05D000004 ORTHO05D000563 2.0e-09 65.9 38 57.9
Cpa.g.sc1555.3 Carica papaya HOM05D000004 ORTHO05D000563 2.6e-09 65.5 38 65.8
Cpa.g.sc40.67 Carica papaya HOM05D000004 ORTHO05D000563 2.6e-09 65.5 38 63.2
Cpa.g.sc54.19 Carica papaya HOM05D000004 ORTHO05D000563 2.6e-09 65.5 38 65.8
Cpa.g.sc6.80 Carica papaya HOM05D000004 ORTHO05D000563 2.6e-09 65.5 38 65.8
Cpa.g.sc143.9 Carica papaya HOM05D000004 ORTHO05D000563 3.4e-09 65.1 38 63.2
Cpa.g.sc2811.1 Carica papaya HOM05D000004 ORTHO05D000563 3.4e-09 65.1 38 65.8
Cpa.g.sc305.4 Carica papaya HOM05D000004 ORTHO05D000563 3.4e-09 65.1 39 66.7
Cpa.g.sc118.7 Carica papaya HOM05D000004 ORTHO05D000563 4.4e-09 64.7 38 63.2
Cpa.g.sc1364.1 Carica papaya HOM05D000004 ORTHO05D000563 4.4e-09 64.7 38 65.8
Cpa.g.sc22.77 Carica papaya HOM05D000004 ORTHO05D000563 4.4e-09 64.7 38 65.8
THA.LOC104818534 Tarenaya hassleriana HOM05D000004 ORTHO05D000563 4.4e-09 64.7 38 60.5
PGR031G3733 Punica granatum HOM05D000004 ORTHO05D000563 5.8e-09 64.3 38 65.8
Cpa.g.sc225.3 Carica papaya HOM05D000004 ORTHO05D000563 7.6e-09 63.9 38 63.2
Cpa.g.sc38.20 Carica papaya HOM05D000004 ORTHO05D000563 7.6e-09 63.9 38 63.2
Cpa.g.sc71.24 Carica papaya HOM05D000004 ORTHO05D000563 7.6e-09 63.9 38 63.2
Cpa.g.sc154.9 Carica papaya HOM05D000004 ORTHO05D000563 9.9e-09 63.5 38 63.2
PGR042G0073 Punica granatum HOM05D000004 ORTHO05D000002 9.9e-09 63.5 38 68.4
Cpa.g.sc143.15 Carica papaya HOM05D000004 ORTHO05D000563 1.3e-08 63.2 38 63.2
Cpa.g.sc172.1 Carica papaya HOM05D000004 ORTHO05D000563 1.3e-08 63.2 38 63.2
Cpa.g.sc35.67 Carica papaya HOM05D000004 ORTHO05D000563 1.3e-08 63.2 38 63.2
Cpa.g.sc4.120 Carica papaya HOM05D000004 ORTHO05D000563 1.3e-08 63.2 37 70.3
Cpa.g.sc66.94 Carica papaya HOM05D000004 ORTHO05D119786 1.3e-08 63.2 56 58.9
SHI49845 Sapria himalayana HOM05D000004 ORTHO05D000563 1.3e-08 63.2 39 56.4
MSTRG.13863 Avicennia marina HOM05D000004 ORTHO05D000563 1.7e-08 62.8 38 65.8
MSTRG.20360 Avicennia marina HOM05D000004 ORTHO05D000002 1.7e-08 62.8 38 65.8
Cpa.g.sc0.188 Carica papaya HOM05D000004 ORTHO05D000563 1.7e-08 62.8 81 42.0
Cpa.g.sc38.75 Carica papaya HOM05D000004 ORTHO05D000563 1.7e-08 62.8 38 63.2
Cpa.g.sc61.2 Carica papaya HOM05D000004 ORTHO05D000563 1.7e-08 62.8 38 63.2
SHI01378 Sapria himalayana HOM05D000004 ORTHO05D000563 1.7e-08 62.8 38 60.5
Cpa.g.sc2219.1 Carica papaya HOM05D000004 ORTHO05D000563 2.2e-08 62.4 38 60.5
Cpa.g.sc60.61 Carica papaya HOM05D000004 ORTHO05D000563 2.2e-08 62.4 38 60.5
PGR031G1605 Punica granatum HOM05D000004 ORTHO05D000002 2.2e-08 62.4 38 55.3
PGR031G3196 Punica granatum HOM05D000004 ORTHO05D000002 2.2e-08 62.4 38 55.3
PGR083G2735 Punica granatum HOM05D000004 ORTHO05D000002 2.2e-08 62.4 38 55.3
Cpa.g.sc303.2 Carica papaya HOM05D000004 ORTHO05D000563 2.9e-08 62.0 38 65.8
Cpa.g.sc44.39 Carica papaya HOM05D000004 ORTHO05D000563 2.9e-08 62.0 38 60.5
Cpa.g.sc56.54 Carica papaya HOM05D000004 ORTHO05D000563 2.9e-08 62.0 38 60.5
Cpa.g.sc658.1 Carica papaya HOM05D000004 ORTHO05D000563 2.9e-08 62.0 38 60.5
Cpa.g.sc251.2 Carica papaya HOM05D000004 ORTHO05D000563 3.8e-08 61.6 38 60.5
Cpa.g.sc40.40 Carica papaya HOM05D000004 ORTHO05D000563 3.8e-08 61.6 39 53.8
QL07p027315 Quercus lobata HOM05D000004 ORTHO05D000002 3.8e-08 61.6 38 55.3
Cpa.g.sc172.6 Carica papaya HOM05D000004 ORTHO05D000563 4.9e-08 61.2 38 60.5
Cpa.g.sc28.100 Carica papaya HOM05D000004 ORTHO05D000563 4.9e-08 61.2 38 57.9
Cpa.g.sc79.55 Carica papaya HOM05D000004 ORTHO05D000563 4.9e-08 61.2 39 61.5
THA.LOC104799780 Tarenaya hassleriana HOM05D000004 ORTHO05D000563 4.9e-08 61.2 38 52.6
THA.LOC104806048 Tarenaya hassleriana HOM05D000004 ORTHO05D000563 4.9e-08 61.2 38 52.6
THA.LOC104821896 Tarenaya hassleriana HOM05D000004 ORTHO05D000563 4.9e-08 61.2 38 52.6
Atru.chr8.715 Acer truncatum HOM05D000004 ORTHO05D000563 6.4e-08 60.8 36 52.8
Cpa.g.sc141.7 Carica papaya HOM05D000004 ORTHO05D000563 6.4e-08 60.8 45 60.0
Cpa.g.sc28.156 Carica papaya HOM05D000004 ORTHO05D000563 8.4e-08 60.5 38 60.5
Cpa.g.sc143.13 Carica papaya HOM05D000004 ORTHO05D000563 1.1e-07 60.1 38 57.9
Cpa.g.sc30.36 Carica papaya HOM05D000004 ORTHO05D000563 1.1e-07 60.1 37 62.2
Cpa.g.sc154.1 Carica papaya HOM05D000004 ORTHO05D000563 1.4e-07 59.7 38 60.5
Cpa.g.sc30.31 Carica papaya HOM05D000004 ORTHO05D000563 1.4e-07 59.7 38 57.9
Cpa.g.sc445.2 Carica papaya HOM05D000004 ORTHO05D000563 1.4e-07 59.7 38 60.5
THA.LOC109116027 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 1.4e-07 59.7 38 52.6
Cpa.g.sc1083.1 Carica papaya HOM05D000004 ORTHO05D000563 1.9e-07 59.3 38 57.9
Cpa.g.sc1555.2 Carica papaya HOM05D000004 ORTHO05D000563 1.9e-07 59.3 38 63.2
Cpa.g.sc181.6 Carica papaya HOM05D000004 ORTHO05D000563 1.9e-07 59.3 37 59.5
Cpa.g.sc31.111 Carica papaya HOM05D000004 ORTHO05D000563 1.9e-07 59.3 38 55.3
Cpa.g.sc3290.1 Carica papaya HOM05D000004 ORTHO05D000563 1.9e-07 59.3 38 63.2
Cpa.g.sc39.88 Carica papaya HOM05D000004 ORTHO05D000563 1.9e-07 59.3 38 57.9
Cpa.g.sc40.46 Carica papaya HOM05D000004 ORTHO05D000563 1.9e-07 59.3 38 60.5
Cpa.g.sc826.2 Carica papaya HOM05D000004 ORTHO05D000563 1.9e-07 59.3 38 60.5
Cpa.g.sc978.1 Carica papaya HOM05D000004 ORTHO05D000563 1.9e-07 59.3 38 60.5
Atru.chr8.565 Acer truncatum HOM05D000004 ORTHO05D000563 2.4e-07 58.9 38 52.6
Cpa.g.sc28.98 Carica papaya HOM05D000004 ORTHO05D000563 2.4e-07 58.9 38 57.9
Cpa.g.sc32.166 Carica papaya HOM05D000004 ORTHO05D000563 2.4e-07 58.9 36 61.1
SHI04223 Sapria himalayana HOM05D003290 ORTHO05D003866 2.4e-07 58.9 35 65.7
Cpa.g.sc1785.1 Carica papaya HOM05D000004 ORTHO05D000563 3.2e-07 58.5 38 55.3
Cpa.g.sc225.4 Carica papaya HOM05D000004 ORTHO05D000563 3.2e-07 58.5 38 55.3
Cpa.g.sc38.15 Carica papaya HOM05D000004 ORTHO05D000563 3.2e-07 58.5 38 55.3
Cpa.g.sc23.8 Carica papaya HOM05D000004 ORTHO05D000563 4.2e-07 58.2 60 50.0
Cpa.g.sc31.28 Carica papaya HOM05D000004 ORTHO05D000563 5.4e-07 57.8 38 57.9
Cpa.g.sc31.56 Carica papaya HOM05D000004 ORTHO05D000563 5.4e-07 57.8 38 52.6
Cpa.g.sc38.3 Carica papaya HOM05D000004 ORTHO05D000563 5.4e-07 57.8 36 61.1
QL10p037628 Quercus lobata HOM05D000004 ORTHO05D000002 5.4e-07 57.8 36 61.1
Cpa.g.sc1884.2 Carica papaya HOM05D000004 ORTHO05D000563 9.3e-07 57.0 35 62.9
Cpa.g.sc28.155 Carica papaya HOM05D000004 ORTHO05D000563 9.3e-07 57.0 48 56.2
SHI32913 Sapria himalayana HOM05D000004 ORTHO05D000563 9.3e-07 57.0 38 52.6
SHI43808 Sapria himalayana HOM05D000004 ORTHO05D000002 9.3e-07 57.0 38 52.6
SHI33683 Sapria himalayana HOM05D000004 ORTHO05D000563 1.2e-06 56.6 36 55.6
Cpa.g.sc210.11 Carica papaya HOM05D000004 ORTHO05D000563 1.6e-06 56.2 38 57.9
Cpa.g.sc28.16 Carica papaya HOM05D000004 ORTHO05D120481 1.6e-06 56.2 98 37.8
Cpa.g.sc28.86 Carica papaya HOM05D000004 ORTHO05D000563 1.6e-06 56.2 38 57.9
Cpa.g.sc66.64 Carica papaya HOM05D000004 ORTHO05D000563 1.6e-06 56.2 36 61.1
Cpa.g.sc880.2 Carica papaya HOM05D000004 ORTHO05D000563 1.6e-06 56.2 38 57.9
Cpa.g.sc15.34 Carica papaya HOM05D000004 ORTHO05D000563 2.7e-06 55.5 36 58.3
Cpa.g.sc239.3 Carica papaya HOM05D000004 ORTHO05D000563 2.7e-06 55.5 36 58.3
Cpa.g.sc75.77 Carica papaya HOM05D000004 ORTHO05D000563 2.7e-06 55.5 34 61.8
Cpa.g.sc100.21 Carica papaya HOM05D000004 ORTHO05D000563 4.6e-06 54.7 35 60.0
Cpa.g.sc1201.1 Carica papaya HOM05D000004 ORTHO05D000563 4.6e-06 54.7 38 57.9
Cpa.g.sc484.1 Carica papaya HOM05D000004 ORTHO05D000563 6.0e-06 54.3 38 50.0
Cpa.g.sc498.2 Carica papaya HOM05D000004 ORTHO05D118383 6.0e-06 54.3 57 49.1
TPR.G40552 Trifolium pratense HOM05D000004 ORTHO05D000563 6.0e-06 54.3 38 47.4


User provided reference genes

Program Settings