Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc32.52 Carica papaya HOM05D006473 ORTHO05D008108 5.8e-89 330.9 167 100.0
Cpa.g.sc8.265 Carica papaya HOM05D006473 ORTHO05D008108 3.2e-39 165.6 192 53.1
ClCG11G016910 Citrullus lanatus HOM05D006473 ORTHO05D008108 4.5e-17 92.0 167 40.1
CANSAT64G1482 Cannabis sativa HOM05D006473 ORTHO05D008108 1.0e-16 90.9 161 42.2
Cfa023365 Carpinus fangiana HOM05D006473 ORTHO05D008108 1.3e-16 90.5 183 41.5
Haze_13544 Corylus avellana HOM05D006473 ORTHO05D008108 1.7e-16 90.1 154 46.8
RcHm_v2.0_Chr2g0153221 Rosa chinensis HOM05D006473 ORTHO05D008108 1.7e-16 90.1 180 40.6
Thecc.01G174700 Theobroma cacao HOM05D006473 ORTHO05D008108 3.8e-16 89.0 176 40.9
FAN05G1961 Fragaria x ananassa HOM05D006473 ORTHO05D008108 6.5e-16 88.2 188 39.9
Prupe.3G184300 Prunus persica HOM05D006473 ORTHO05D008108 2.5e-15 86.3 156 43.6
FvH4_6g39300 Fragaria vesca HOM05D006473 ORTHO05D008108 7.2e-15 84.7 188 38.3
FAN09G0937 Fragaria x ananassa HOM05D006473 ORTHO05D008108 7.2e-15 84.7 197 37.6
FAN14G2613 Fragaria x ananassa HOM05D006473 ORTHO05D008108 7.2e-15 84.7 197 37.6
MD09G1143500 Malus domestica HOM05D006473 ORTHO05D008108 2.7e-14 82.8 161 42.2
CiPaw.03G109100 Carya illinoinensis HOM05D006473 ORTHO05D008108 4.7e-14 82.0 177 39.5
Gohir.A11G155300 Gossypium hirsutum HOM05D006473 ORTHO05D008108 4.7e-14 82.0 188 37.2
MD17G1129800 Malus domestica HOM05D006473 ORTHO05D008108 4.7e-14 82.0 186 40.3
Gohir.D11G162300 Gossypium hirsutum HOM05D006473 ORTHO05D008108 6.1e-14 81.6 188 36.7
Duzib138G0874 Durio zibethinus HOM05D006473 ORTHO05D008108 8.0e-14 81.3 175 39.4
Gorai.007G172600 Gossypium raimondii HOM05D006473 ORTHO05D008108 8.0e-14 81.3 188 36.7
PGR031G0759 Punica granatum HOM05D006473 ORTHO05D008108 1.0e-13 80.9 168 41.7
Sabra06G0006200 Salix brachista HOM05D006473 ORTHO05D008108 1.4e-13 80.5 188 38.8
Sed0027280 Sechium edule HOM05D006473 ORTHO05D008108 1.8e-13 80.1 165 37.6
TWI34G1686 Tripterygium wilfordii HOM05D006473 ORTHO05D008108 5.2e-13 78.6 178 37.6
Ciclev10012907m.g Citrus clementina HOM05D006473 ORTHO05D008108 6.7e-13 78.2 145 42.1
MELO3C026363.2 Cucumis melo HOM05D006473 ORTHO05D008108 6.7e-13 78.2 165 37.6
TAR626G1390 Trochodendron aralioides HOM05D006473 ORTHO05D008108 8.8e-13 77.8 153 35.9
Lsat_1_v5_gn_1_29560 Lactuca sativa HOM05D006473 ORTHO05D008108 1.2e-12 77.4 169 38.5
TAR626G1015 Trochodendron aralioides HOM05D006473 ORTHO05D008108 1.2e-12 77.4 151 40.4
COL.COLO4_19989 Corchorus olitorius HOM05D006473 ORTHO05D008108 1.5e-12 77.0 178 38.8
Migut.H01260 Erythranthe guttata HOM05D006473 ORTHO05D008108 2.0e-12 76.6 145 37.2
Eucgr.A00949 Eucalyptus grandis HOM05D006473 ORTHO05D008108 3.3e-12 75.9 138 38.4
Lj6g0005292 Lotus japonicus HOM05D006473 ORTHO05D008108 3.3e-12 75.9 173 38.7
Ca_16320_v3 Cicer arietinum L. HOM05D006473 ORTHO05D008108 4.4e-12 75.5 143 42.7
CsaV3_4G032520 Cucumis sativus L. HOM05D006473 ORTHO05D008108 7.5e-12 74.7 173 37.0
CiPaw.04G072200 Carya illinoinensis HOM05D006473 ORTHO05D008108 1.7e-11 73.6 155 42.6
Potri.006G008000 Populus trichocarpa HOM05D006473 ORTHO05D008108 1.7e-11 73.6 170 40.0
QL07p025679 Quercus lobata HOM05D006473 ORTHO05D008108 3.7e-11 72.4 179 39.1
Glyma.13G004200 Glycine max HOM05D006473 ORTHO05D008108 6.3e-11 71.6 145 42.1
TPR.G17559 Trifolium pratense HOM05D006473 ORTHO05D008108 6.3e-11 71.6 172 39.0
Manes.08G068100 Manihot esculenta HOM05D006473 ORTHO05D008108 8.2e-11 71.2 148 41.2
Phvul.007G120134 Phaseolus vulgaris HOM05D006473 ORTHO05D008108 1.1e-10 70.9 172 40.1
Psat5g106240 Pisum sativum HOM05D006473 ORTHO05D008108 1.1e-10 70.9 153 38.6
Glyma.20G063000 Glycine max HOM05D006473 ORTHO05D008108 1.4e-10 70.5 167 37.7
Atru.chr8.1011 Acer truncatum HOM05D006473 ORTHO05D008108 1.8e-10 70.1 175 35.4
Medtr3g082070 Medicago truncatula HOM05D006473 ORTHO05D008108 1.8e-10 70.1 151 39.7
Sc07g0001930 Simmondsia chinensis HOM05D006473 ORTHO05D008108 1.8e-10 70.1 146 38.4
QL07p027003 Quercus lobata HOM05D006473 ORTHO05D008108 2.4e-10 69.7 174 39.1
QL10p019398 Quercus lobata HOM05D006473 ORTHO05D008108 2.4e-10 69.7 153 41.8
Sabra16G0000300 Salix brachista HOM05D006473 ORTHO05D008108 3.1e-10 69.3 169 37.3
CAN.G529.20 Capsicum annuum HOM05D006473 ORTHO05D008108 5.3e-10 68.6 134 40.3
QL04p064817 Quercus lobata HOM05D006473 ORTHO05D008108 5.3e-10 68.6 145 40.0
Nn7g38339 Nelumbo nucifera HOM05D006473 ORTHO05D008108 7.0e-10 68.2 153 33.3
CARHR221880 Cardamine hirsuta HOM05D006473 ORTHO05D008108 9.1e-10 67.8 168 35.7
VMungo0540G0033 Vigna mungo HOM05D006473 ORTHO05D008108 9.1e-10 67.8 144 40.3
Peaxi162Scf00322g00416 Petunia axillaris HOM05D006473 ORTHO05D008108 1.6e-09 67.0 160 36.9
QL07p026949 Quercus lobata HOM05D006473 ORTHO05D008108 1.6e-09 67.0 173 38.7
BcaB02g07838 Brassica carinata HOM05D006473 ORTHO05D008108 2.0e-09 66.6 150 38.7
A08p11670 Brassica napus HOM05D006473 ORTHO05D008108 2.7e-09 66.2 170 37.6
BraA08t33161Z Brassica rapa HOM05D006473 ORTHO05D008108 2.7e-09 66.2 170 37.6
CSS0026100 Camellia sinensis var. sinensis HOM05D006473 ORTHO05D008108 2.7e-09 66.2 170 37.1
CSS0046570 Camellia sinensis var. sinensis HOM05D006473 ORTHO05D008108 2.7e-09 66.2 170 37.1
BcaC07g37876 Brassica carinata HOM05D006473 ORTHO05D008108 3.5e-09 65.9 169 35.5
BolC8t48269H Brassica oleracea HOM05D006473 ORTHO05D008108 3.5e-09 65.9 169 35.5
COL.COLO4_18222 Corchorus olitorius HOM05D006473 ORTHO05D008108 4.5e-09 65.5 180 36.1
BraA05t20604Z Brassica rapa HOM05D006473 ORTHO05D008108 5.9e-09 65.1 149 35.6
Carub.0007s2685 Capsella rubella HOM05D006473 ORTHO05D008108 5.9e-09 65.1 169 34.3
SGA_v2.0_scaffold49G18372 Striga asiatica HOM05D006473 ORTHO05D008108 5.9e-09 65.1 141 38.3
THA.LOC104808506 Tarenaya hassleriana HOM05D006473 ORTHO05D008108 5.9e-09 65.1 173 36.4
Nitab4.5_0002292g0030 Nicotiana tabacum HOM05D006473 ORTHO05D008108 7.7e-09 64.7 149 36.2
arahy.Tifrunner.gnm1.ann1.ITU10B Arachis hypogaea HOM05D006473 ORTHO05D008108 1.0e-08 64.3 136 35.3
Rhsim12G0015400 Rhododendron simsii HOM05D006473 ORTHO05D008108 1.7e-08 63.5 143 39.9
GSVIVG01015888001 Vitis vinifera HOM05D006473 ORTHO05D008108 1.7e-08 63.5 139 41.7
Actinidia12507 Actinidia chinensis HOM05D006473 ORTHO05D008108 2.2e-08 63.2 161 34.8
BcaB04g18284 Brassica carinata HOM05D006473 ORTHO05D008108 2.2e-08 63.2 166 35.5
A05p16970 Brassica napus HOM05D006473 ORTHO05D008108 2.2e-08 63.2 147 36.1
arahy.Tifrunner.gnm1.ann1.UN21ID Arachis hypogaea HOM05D006473 ORTHO05D008108 2.9e-08 62.8 136 34.6
QL04p064939 Quercus lobata HOM05D006473 ORTHO05D008108 2.9e-08 62.8 147 40.1
EL10Ac6g15336 Beta vulgaris HOM05D006473 ORTHO05D008108 5.0e-08 62.0 151 35.8
BcaC08g44251 Brassica carinata HOM05D006473 ORTHO05D008108 8.5e-08 61.2 149 34.2
C06p16570 Brassica napus HOM05D006473 ORTHO05D008108 8.5e-08 61.2 149 34.2
BolC6t36859H Brassica oleracea HOM05D006473 ORTHO05D008108 8.5e-08 61.2 149 34.2
Haze_13545 Corylus avellana HOM05D006473 ORTHO05D008108 8.5e-08 61.2 156 39.7
Aqoxy5G02466 Aquilegia oxysepala HOM05D006473 ORTHO05D008108 1.1e-07 60.8 124 37.1
Sp7g13370 Schrenkiella parvula HOM05D006473 ORTHO05D008108 1.1e-07 60.8 171 34.5
Cc00_g04870 Coffea canephora HOM05D006473 ORTHO05D008108 1.5e-07 60.5 151 34.4
ECA247G3587 Erigeron canadensis HOM05D006473 ORTHO05D008108 1.5e-07 60.5 171 33.9
Nitab4.5_0011512g0010 Nicotiana tabacum HOM05D006473 ORTHO05D008108 1.5e-07 60.5 148 36.5
Peaxi162Scf00393g01011 Petunia axillaris HOM05D006473 ORTHO05D008108 1.5e-07 60.5 146 37.7
Solyc07g043070.3 Solanum lycopersicum HOM05D006473 ORTHO05D008108 1.5e-07 60.5 140 36.4
Sopen07g022630 Solanum pennellii HOM05D006473 ORTHO05D008108 1.5e-07 60.5 140 36.4
Actinidia32074 Actinidia chinensis HOM05D006473 ORTHO05D008108 1.9e-07 60.1 169 31.4
Sed0014549 Sechium edule HOM05D006473 ORTHO05D008108 2.5e-07 59.7 174 36.2
AT4G15140 Arabidopsis thaliana HOM05D006473 ORTHO05D008108 3.2e-07 59.3 158 36.1
QL09p045725 Quercus lobata HOM05D006473 ORTHO05D008108 1.2e-06 57.4 110 40.0
PGSC0003DMG400013558 Solanum tuberosum HOM05D006473 ORTHO05D008108 1.2e-06 57.4 134 36.6
Hund04387 Selenicereus undatus HOM05D006473 ORTHO05D008108 2.1e-06 56.6 130 33.8
AL7G40560 Arabidopsis lyrata HOM05D006473 ORTHO05D008108 2.7e-06 56.2 137 35.8
Nitab4.5_0000170g0320 Nicotiana tabacum HOM05D006473 ORTHO05D008108 2.7e-06 56.2 92 42.4
QL07p026979 Quercus lobata HOM05D006473 ORTHO05D008108 2.7e-06 56.2 118 41.5
Hund23023 Selenicereus undatus HOM05D006473 ORTHO05D008108 6.1e-06 55.1 130 35.4


User provided reference genes

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