Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc32.104 Carica papaya HOM05D006704 ORTHO05D008635 5.7e-48 193.7 87 100.0
QL01p012560 Quercus lobata HOM05D006704 ORTHO05D008635 4.7e-26 120.9 77 70.1
Dinv29464 Davidia involucrata HOM05D006704 ORTHO05D008635 1.1e-25 119.8 77 68.8
Cfa010042 Carpinus fangiana HOM05D006704 ORTHO05D008635 5.2e-25 117.5 77 68.8
Haze_23402 Corylus avellana HOM05D006704 ORTHO05D008635 5.2e-25 117.5 77 68.8
PGR119G0959 Punica granatum HOM05D006704 ORTHO05D008635 5.2e-25 117.5 78 70.5
Eucgr.I00893 Eucalyptus grandis HOM05D006704 ORTHO05D008635 1.5e-24 115.9 79 65.8
TWI31G0547 Tripterygium wilfordii HOM05D006704 ORTHO05D008635 1.5e-24 115.9 77 66.2
GSVIVG01036154001 Vitis vinifera HOM05D006704 ORTHO05D008635 1.5e-24 115.9 79 65.8
Duzib170G0143 Durio zibethinus HOM05D006704 ORTHO05D008635 2.6e-24 115.2 79 67.1
Sed0027356 Sechium edule HOM05D006704 ORTHO05D008635 2.6e-24 115.2 77 64.9
COL.COLO4_19912 Corchorus olitorius HOM05D006704 ORTHO05D008635 5.8e-24 114.0 79 65.8
DCAR_006157 Daucus carota HOM05D006704 ORTHO05D008635 5.8e-24 114.0 77 64.9
PSO339G4200 Papaver somniferum HOM05D006704 ORTHO05D008635 5.8e-24 114.0 79 63.3
Thecc.09G286000 Theobroma cacao HOM05D006704 ORTHO05D008635 5.8e-24 114.0 79 65.8
TAR633G0569 Trochodendron aralioides HOM05D006704 ORTHO05D008635 5.8e-24 114.0 79 62.0
MELO3C004818.2 Cucumis melo HOM05D006704 ORTHO05D008635 7.5e-24 113.6 77 63.6
Hma1.2p1_0305F.1_g119670 Hydrangea macrophylla HOM05D006704 ORTHO05D008635 7.5e-24 113.6 76 67.1
PSO384G3226 Papaver somniferum HOM05D006704 ORTHO05D008635 7.5e-24 113.6 79 63.3
THA.LOC104800539 Tarenaya hassleriana HOM05D006704 ORTHO05D008635 7.5e-24 113.6 76 65.8
ClCG01G012900 Citrullus lanatus HOM05D006704 ORTHO05D008635 9.9e-24 113.2 77 63.6
CsaV3_1G014420 Cucumis sativus L. HOM05D006704 ORTHO05D008635 9.9e-24 113.2 77 63.6
Ciclev10028571m.g Citrus clementina HOM05D006704 ORTHO05D008635 1.7e-23 112.5 79 64.6
Lj3g0010910 Lotus japonicus HOM05D006704 ORTHO05D008635 1.7e-23 112.5 77 64.9
Glyma.11G184500 Glycine max HOM05D006704 ORTHO05D008635 2.2e-23 112.1 77 64.9
TPR.G17210 Trifolium pratense HOM05D006704 ORTHO05D008635 2.2e-23 112.1 77 64.9
Glyma.12G087800 Glycine max HOM05D006704 ORTHO05D008635 2.9e-23 111.7 77 64.9
Lsat_1_v5_gn_6_40481 Lactuca sativa HOM05D006704 ORTHO05D008635 2.9e-23 111.7 77 61.0
Manes.11G160500 Manihot esculenta HOM05D006704 ORTHO05D008635 2.9e-23 111.7 79 62.0
Psat7g188440 Pisum sativum HOM05D006704 ORTHO05D008635 2.9e-23 111.7 77 64.9
Nn6g34957 Nelumbo nucifera HOM05D006704 ORTHO05D008635 3.7e-23 111.3 79 64.6
vmacro03306 Vaccinium macrocarpon HOM05D006704 ORTHO05D008635 3.7e-23 111.3 77 63.6
CSS0007169 Camellia sinensis var. sinensis HOM05D006704 ORTHO05D008635 4.9e-23 110.9 77 64.9
CSS0018673 Camellia sinensis var. sinensis HOM05D006704 ORTHO05D008635 4.9e-23 110.9 77 64.9
Gohir.A05G081700 Gossypium hirsutum HOM05D006704 ORTHO05D008635 4.9e-23 110.9 79 63.3
Gorai.009G086600 Gossypium raimondii HOM05D006704 ORTHO05D008635 4.9e-23 110.9 79 63.3
HanXRQChr12g0364591 Helianthus annuus HOM05D006704 ORTHO05D008635 4.9e-23 110.9 77 62.3
Prupe.6G127300 Prunus persica HOM05D006704 ORTHO05D008635 4.9e-23 110.9 77 64.9
AL4G22810 Arabidopsis lyrata HOM05D006704 ORTHO05D008635 6.4e-23 110.5 77 62.3
AT2G27590 Arabidopsis thaliana HOM05D006704 ORTHO05D008635 6.4e-23 110.5 77 62.3
Lj2A980T13 Lonicera japonica HOM05D006704 ORTHO05D008635 6.4e-23 110.5 77 62.3
Potri.004G184400 Populus trichocarpa HOM05D006704 ORTHO05D008635 6.4e-23 110.5 79 62.0
Gohir.D05G084700 Gossypium hirsutum HOM05D006704 ORTHO05D008635 8.3e-23 110.2 76 64.5
MD03G1142000 Malus domestica HOM05D006704 ORTHO05D008635 8.3e-23 110.2 77 63.6
Rhsim13G0110100 Rhododendron simsii HOM05D006704 ORTHO05D008635 8.3e-23 110.2 77 62.3
VMungo1127G0699 Vigna mungo HOM05D006704 ORTHO05D008635 8.3e-23 110.2 76 64.5
RcHm_v2.0_Chr5g0044201 Rosa chinensis HOM05D006704 ORTHO05D008635 1.1e-22 109.8 77 63.6
arahy.Tifrunner.gnm1.ann1.JHI8LQ Arachis hypogaea HOM05D006704 ORTHO05D008635 1.4e-22 109.4 77 62.3
CAN.G919.21 Capsicum annuum HOM05D006704 ORTHO05D008635 1.4e-22 109.4 77 63.6
ECA233G1041 Erigeron canadensis HOM05D006704 ORTHO05D008635 1.4e-22 109.4 77 61.0
EL10Ac7g15806 Beta vulgaris HOM05D006704 ORTHO05D008635 1.9e-22 109.0 77 59.7
CANSAT54G0988 Cannabis sativa HOM05D006704 ORTHO05D008635 1.9e-22 109.0 77 62.3
Medtr4g053410 Medicago truncatula HOM05D006704 ORTHO05D008635 1.9e-22 109.0 77 62.3
Solyc06g074380.3 Solanum lycopersicum HOM05D006704 ORTHO05D008635 1.9e-22 109.0 77 63.6
Sopen06g030840 Solanum pennellii HOM05D006704 ORTHO05D008635 1.9e-22 109.0 77 63.6
PGSC0003DMG400007144 Solanum tuberosum HOM05D006704 ORTHO05D008635 1.9e-22 109.0 77 63.6
BcaB06g28156 Brassica carinata HOM05D006704 ORTHO05D008635 2.4e-22 108.6 77 61.0
BcaC02g08239 Brassica carinata HOM05D006704 ORTHO05D008635 2.4e-22 108.6 77 61.0
A04p21040 Brassica napus HOM05D006704 ORTHO05D008635 2.4e-22 108.6 77 61.0
C04p56860 Brassica napus HOM05D006704 ORTHO05D008635 2.4e-22 108.6 77 61.0
BolC4t27219H Brassica oleracea HOM05D006704 ORTHO05D008635 2.4e-22 108.6 77 61.0
BraA04t17672Z Brassica rapa HOM05D006704 ORTHO05D008635 2.4e-22 108.6 77 61.0
Cc01_g09380 Coffea canephora HOM05D006704 ORTHO05D008635 2.4e-22 108.6 76 63.2
Peaxi162Scf00091g00118 Petunia axillaris HOM05D006704 ORTHO05D008635 2.4e-22 108.6 77 63.6
Sp4g10410 Schrenkiella parvula HOM05D006704 ORTHO05D008635 2.4e-22 108.6 77 61.0
Atru.chr3.3296 Acer truncatum HOM05D006704 ORTHO05D008635 3.2e-22 108.2 77 62.3
AUR62009778 Chenopodium quinoa HOM05D006704 ORTHO05D008635 3.2e-22 108.2 77 59.7
AUR62039223 Chenopodium quinoa HOM05D006704 ORTHO05D008635 3.2e-22 108.2 77 59.7
Ca_19394_v3 Cicer arietinum L. HOM05D006704 ORTHO05D008635 3.2e-22 108.2 77 62.3
Lalb_Chr03g0028021 Lupinus albus HOM05D006704 ORTHO05D008635 3.2e-22 108.2 77 61.0
Migut.D02353 Erythranthe guttata HOM05D006704 ORTHO05D008635 4.1e-22 107.8 77 59.7
Nitab4.5_0002002g0030 Nicotiana tabacum HOM05D006704 ORTHO05D008635 4.1e-22 107.8 77 62.3
Thhalv10016700m.g Eutrema salsugineum HOM05D006704 ORTHO05D008635 5.4e-22 107.5 77 61.0
FAN16G1713 Fragaria x ananassa HOM05D006704 ORTHO05D008635 5.4e-22 107.5 77 61.0
Phvul.011G092800 Phaseolus vulgaris HOM05D006704 ORTHO05D008635 5.4e-22 107.5 77 61.0
FAN11G2081 Fragaria x ananassa HOM05D006704 ORTHO05D008635 7.1e-22 107.1 77 61.0
FAN21G3586 Fragaria x ananassa HOM05D006704 ORTHO05D008635 7.1e-22 107.1 77 61.0
SGA_v2.0_scaffold22G09877 Striga asiatica HOM05D006704 ORTHO05D008635 7.1e-22 107.1 77 61.0
FvH4_3g24630 Fragaria vesca HOM05D006704 ORTHO05D008635 9.2e-22 106.7 77 59.7
Sabra04G0124100 Salix brachista HOM05D006704 ORTHO05D008635 9.2e-22 106.7 79 59.5
Sc12g0004410 Simmondsia chinensis HOM05D006704 ORTHO05D008635 9.2e-22 106.7 77 59.7
Aa31LG5G8320 Aethionema arabicum HOM05D006704 ORTHO05D008635 1.2e-21 106.3 76 60.5
arahy.Tifrunner.gnm1.ann1.GMPU9C Arachis hypogaea HOM05D006704 ORTHO05D008635 1.2e-21 106.3 77 61.0
MBI17_g08127_MAGBIO Magnolia biondii HOM05D006704 ORTHO05D008635 1.2e-21 106.3 79 59.5
SalBow6G4963 Salvia bowleyana HOM05D006704 ORTHO05D008635 1.6e-21 105.9 77 58.4
Carub.0004s0825 Capsella rubella HOM05D006704 ORTHO05D008635 2.1e-21 105.5 76 59.2
Hund20877 Selenicereus undatus HOM05D006704 ORTHO05D008635 2.1e-21 105.5 77 58.4
Aqoxy2G01240 Aquilegia oxysepala HOM05D006704 ORTHO05D008635 4.6e-21 104.4 79 57.0
CDE06G2417 Ceratophyllum demersum HOM05D006704 ORTHO05D008635 6.0e-21 104.0 79 59.5
CARHR121470 Cardamine hirsuta HOM05D006704 ORTHO05D008635 1.7e-20 102.4 77 55.8
Oeu031485.1 Olea europaea HOM05D006704 ORTHO05D008635 1.7e-20 102.4 65 67.7
unitig_37.g12893 Utricularia gibba HOM05D006704 ORTHO05D008635 1.7e-20 102.4 77 58.4
Nitab4.5_0015718g0010 Nicotiana tabacum HOM05D006704 ORTHO05D008635 3.0e-20 101.7 74 60.8
MSTRG.18751 Avicennia marina HOM05D006704 ORTHO05D008635 5.1e-20 100.9 77 57.1
Ah.08g215840 Amaranthus hybridus HOM05D006704 ORTHO05D008635 6.6e-20 100.5 76 56.6
Actinidia24205 Actinidia chinensis HOM05D006704 ORTHO05D008635 1.9e-19 99.0 65 63.1
Nitab4.5_0002002g0020 Nicotiana tabacum HOM05D006704 ORTHO05D008635 5.6e-19 97.4 73 58.9
TWI79G0085 Tripterygium wilfordii HOM05D006704 ORTHO05D008635 5.6e-19 97.4 71 62.0
HPP92_000003 Vanilla planifolia HOM05D006704 ORTHO05D008635 5.6e-19 97.4 76 53.9
Os01g0858700 Oryza sativa ssp. japonica HOM05D006704 ORTHO05D008635 2.1e-18 95.5 77 51.9
SEGI_32150 Sequoiadendron giganteum HOM05D006704 ORTHO05D008635 1.8e-17 92.4 83 51.8
Zm00001eb147310 Zea mays HOM05D006704 ORTHO05D008635 4.0e-17 91.3 77 51.9
ATR0820G138 Amborella trichopoda HOM05D006704 ORTHO05D008635 2.0e-16 89.0 76 55.3
CiPaw.13G137600 Carya illinoinensis HOM05D006704 ORTHO05D008635 1.4e-14 82.8 69 56.5
Mapoly0047s0027 Marchantia polymorpha HOM05D006704 ORTHO05D008635 4.2e-14 81.3 77 45.5
SMO079G0003 Selaginella moellendorffii HOM05D006704 ORTHO05D008635 3.0e-12 75.1 77 45.5
SMO200G0095 Selaginella moellendorffii HOM05D006704 ORTHO05D008635 3.0e-12 75.1 77 45.5
AagrBONN_evm.TU.Sc2ySwM_228.5549 Anthoceros agrestis HOM05D006704 ORTHO05D008635 3.9e-12 74.7 78 41.0
Actinidia07237 Actinidia chinensis HOM05D006704 ORTHO05D008635 4.8e-10 67.8 68 48.5
Migut.D01870 Erythranthe guttata HOM05D006704 ORTHO05D008635 3.4e-08 61.6 51 49.0


User provided reference genes

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